RNA–Protein interactions for RNA: ENST00000505470.5

PGM3-204, Transcript of phosphoglucomutase 3, human

TSL 4

Gene PGM3, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGM3-204	ENST00000505470	U2AF1	Q01081	240 aa	Known RBP eCLIP	15.62	■□□□□ 0.09	2e-16	■■■■■ 53.7
PGM3-204	ENST00000505470	U2AF2	P26368	475 aa	Known RBP eCLIP	12.96	□□□□□ -0.33	5e-7	■■■■■ 52.9
PGM3-204	ENST00000505470	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.79	□□□□□ -0.52	4e-6	■■■■□ 20.4
PGM3-204	ENST00000505470	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.56	□□□□□ -0.56	5e-7	■■■■□ 19.7
PGM3-204	ENST00000505470	SF3A3	Q12874	501 aa	Known RBP eCLIP	10.15	□□□□□ -0.78	8e-17	■■■□□ 15.1
PGM3-204	ENST00000505470	RPS3	P23396	243 aa	Known RBP eCLIP	11.25	□□□□□ -0.61	2e-7	■■■□□ 14.8
PGM3-204	ENST00000505470	KHSRP	Q92945	711 aa	Known RBP eCLIP	13	□□□□□ -0.33	3e-11	■■□□□ 14.2
PGM3-204	ENST00000505470	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	14.11	□□□□□ -0.15	2e-6	■■□□□ 13.1
PGM3-204	ENST00000505470	PPIG	Q13427	754 aa	Known RBP eCLIP	13.53	□□□□□ -0.24	2e-7	■■□□□ 12.3
PGM3-204	ENST00000505470	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.46	□□□□□ -0.25	5e-8	■■□□□ 11.6
PGM3-204	ENST00000505470	AQR	O60306	1485 aa	Known RBP eCLIP	20.9	■□□□□ 0.94	9e-6	■□□□□ 10.2
PGM3-204	ENST00000505470	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	15.95	■□□□□ 0.14	3e-8	■□□□□ 10.1
PGM3-204	ENST00000505470	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	9.98	□□□□□ -0.81	1e-6	■□□□□ 8.5

Retrieved 13 of 13 RNA–protein pairs in 5.5 ms