RNA–Protein interactions for RNA: ENST00000505339.1

AC010343.3-203, humanhuman

TSL 3

Gene AC010343.3, Length 394 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010343.3-203ENST00000505339 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
AC010343.3-203ENST00000505339 ABCC9O60706 1549 aa17.46■□□□□ 0.39
AC010343.3-203ENST00000505339 CCDC180Q9P1Z9 1646 aa17.26■□□□□ 0.35
AC010343.3-203ENST00000505339 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
AC010343.3-203ENST00000505339 RB1CC1Q8TDY2 1594 aa16.57■□□□□ 0.24
AC010343.3-203ENST00000505339 NACADO15069 1562 aa16.43■□□□□ 0.22
AC010343.3-203ENST00000505339 MYO15BQ96JP2 1530 aa16.22■□□□□ 0.19
AC010343.3-203ENST00000505339 CHIC1Q5VXU3 224 aa16.2■□□□□ 0.18
AC010343.3-203ENST00000505339 PABPN1Q86U42 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
AC010343.3-203ENST00000505339 DCAF8L2P0C7V8 631 aa16.18■□□□□ 0.18
AC010343.3-203ENST00000505339 BICRAQ9NZM4 1560 aa16.09■□□□□ 0.17
AC010343.3-203ENST00000505339 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.16
AC010343.3-203ENST00000505339 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
AC010343.3-203ENST00000505339 ZCCHC6Q5VYS8 1495 aaKnown RBP15.9■□□□□ 0.14
AC010343.3-203ENST00000505339 DCAF1Q9Y4B6 1507 aa15.88■□□□□ 0.13
AC010343.3-203ENST00000505339 CECR2Q9BXF3 1484 aa15.82■□□□□ 0.12
AC010343.3-203ENST00000505339 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
AC010343.3-203ENST00000505339 EIF4G1Q04637 1599 aaKnown RBP15.71■□□□□ 0.11
AC010343.3-203ENST00000505339 DNAJC5Q9H3Z4 198 aa15.63■□□□□ 0.09
AC010343.3-203ENST00000505339 SCRIBQ14160 1630 aa15.63■□□□□ 0.09
AC010343.3-203ENST00000505339 AEBP2Q6ZN18 517 aaPredicted RBP15.33■□□□□ 0.04
AC010343.3-203ENST00000505339 CUX2O14529 1486 aa15.3■□□□□ 0.04
AC010343.3-203ENST00000505339 NCAPD3P42695 1498 aa15.21■□□□□ 0.03
AC010343.3-203ENST00000505339 ERCC6Q03468 1493 aa15.1■□□□□ 0.01
AC010343.3-203ENST00000505339 ATAD2BQ9ULI0 1458 aa15.08■□□□□ 0
AC010343.3-203ENST00000505339 HMGXB3Q12766 1538 aa15.03■□□□□ -0
AC010343.3-203ENST00000505339 SMARCA2P51531 1590 aa15.01□□□□□ -0.01
AC010343.3-203ENST00000505339 BAZ1AQ9NRL2 1556 aaPredicted RBP14.94□□□□□ -0.02
AC010343.3-203ENST00000505339 SMARCA4P51532 1647 aa14.92□□□□□ -0.02
AC010343.3-203ENST00000505339 NESP48681 1621 aa14.91□□□□□ -0.02
AC010343.3-203ENST00000505339 PEG3Q9GZU2 1588 aa14.88□□□□□ -0.03
AC010343.3-203ENST00000505339 THOC2Q8NI27 1593 aaKnown RBP14.86□□□□□ -0.03
AC010343.3-203ENST00000505339 BAZ1BQ9UIG0 1483 aaKnown RBP14.86□□□□□ -0.03
AC010343.3-203ENST00000505339 LAMC3Q9Y6N6 1575 aa14.85□□□□□ -0.03
AC010343.3-203ENST00000505339 PDS5BQ9NTI5 1447 aa14.8□□□□□ -0.04
AC010343.3-203ENST00000505339 SLC24A1O60721 1099 aa14.71□□□□□ -0.05
AC010343.3-203ENST00000505339 CADPSQ9ULU8 1353 aa14.71□□□□□ -0.06
AC010343.3-203ENST00000505339 MROH2BQ7Z745 1585 aa14.68□□□□□ -0.06
AC010343.3-203ENST00000505339 KIF21AQ7Z4S6 1674 aa14.67□□□□□ -0.06
AC010343.3-203ENST00000505339 MRC2Q9UBG0 1479 aa14.65□□□□□ -0.06
AC010343.3-203ENST00000505339 TRIM41Q8WV44 630 aa14.64□□□□□ -0.07
AC010343.3-203ENST00000505339 WDR62O43379 1518 aa14.64□□□□□ -0.07
AC010343.3-203ENST00000505339 OSCARQ8IYS5 282 aa14.52□□□□□ -0.09
AC010343.3-203ENST00000505339 CEP164Q9UPV0 1460 aa14.51□□□□□ -0.09
AC010343.3-203ENST00000505339 WIZO95785 1651 aa14.49□□□□□ -0.09
AC010343.3-203ENST00000505339 EHMT2Q96KQ7 1210 aa14.49□□□□□ -0.09
AC010343.3-203ENST00000505339 PHF23Q9BUL5 403 aaPredicted RBP14.49□□□□□ -0.09
AC010343.3-203ENST00000505339 CFTRP13569 1480 aa14.48□□□□□ -0.09
AC010343.3-203ENST00000505339 FANCD2Q9BXW9 1451 aa14.48□□□□□ -0.09
AC010343.3-203ENST00000505339 RSF1Q96T23 1441 aaPredicted RBP14.44□□□□□ -0.1
AC010343.3-203ENST00000505339 TOP2AP11388 1531 aaKnown RBP14.44□□□□□ -0.1
AC010343.3-203ENST00000505339 URB2Q14146 1524 aaKnown RBP14.37□□□□□ -0.11
AC010343.3-203ENST00000505339 IFT140Q96RY7 1462 aa14.28□□□□□ -0.12
AC010343.3-203ENST00000505339 RIMBP3CA6NJZ7 1639 aa14.27□□□□□ -0.12
AC010343.3-203ENST00000505339 RIMBP3BA6NNM3 1639 aa14.27□□□□□ -0.12
AC010343.3-203ENST00000505339 RIMBP3Q9UFD9 1639 aa14.27□□□□□ -0.12
AC010343.3-203ENST00000505339 ARHGEF11O15085 1522 aa14.25□□□□□ -0.13
AC010343.3-203ENST00000505339 ZNF608Q9ULD9 1512 aaPredicted RBP14.22□□□□□ -0.13
AC010343.3-203ENST00000505339 PRDM2Q13029 1718 aa14.21□□□□□ -0.14
AC010343.3-203ENST00000505339 CCDC88BA6NC98 1476 aa14.2□□□□□ -0.14
AC010343.3-203ENST00000505339 ABCC8Q09428 1581 aa14.2□□□□□ -0.14
AC010343.3-203ENST00000505339 TOPBP1Q92547 1522 aa14.17□□□□□ -0.14
AC010343.3-203ENST00000505339 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
AC010343.3-203ENST00000505339 EIF4G3O43432 1585 aaKnown RBP14.1□□□□□ -0.15
AC010343.3-203ENST00000505339 DNMBPQ6XZF7 1577 aa14.09□□□□□ -0.15
AC010343.3-203ENST00000505339 ARAP1Q96P48 1450 aa14.09□□□□□ -0.15
AC010343.3-203ENST00000505339 TARBP1Q13395 1621 aaKnown RBP14.07□□□□□ -0.16
AC010343.3-203ENST00000505339 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.16
AC010343.3-203ENST00000505339 POLA1P09884 1462 aaPredicted RBP14.01□□□□□ -0.17
AC010343.3-203ENST00000505339 TRHP20396 242 aaPredicted RBP14.01□□□□□ -0.17
AC010343.3-203ENST00000505339 CHD1O14646 1710 aa13.99□□□□□ -0.17
AC010343.3-203ENST00000505339 WDR97A6NE52 1622 aa13.98□□□□□ -0.17
AC010343.3-203ENST00000505339 CLASP1Q7Z460 1538 aa13.95□□□□□ -0.18
AC010343.3-203ENST00000505339 FBLN2P98095 1184 aa13.95□□□□□ -0.18
AC010343.3-203ENST00000505339 SOGA1O94964 1423 aa13.94□□□□□ -0.18
AC010343.3-203ENST00000505339 MAGI1Q96QZ7 1491 aaPredicted RBP13.93□□□□□ -0.18
AC010343.3-203ENST00000505339 TDRD9Q8NDG6 1382 aaKnown RBP13.92□□□□□ -0.18
AC010343.3-203ENST00000505339 RAD54L2Q9Y4B4 1467 aa13.91□□□□□ -0.18
AC010343.3-203ENST00000505339 SNAPC4Q5SXM2 1469 aa13.89□□□□□ -0.19
AC010343.3-203ENST00000505339 SUPT5HO00267 1087 aaKnown RBP13.89□□□□□ -0.19
AC010343.3-203ENST00000505339 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
AC010343.3-203ENST00000505339 CHMP7Q8WUX9 453 aaPredicted RBP13.88□□□□□ -0.19
AC010343.3-203ENST00000505339 GRIN2BQ13224 1484 aa13.87□□□□□ -0.19
AC010343.3-203ENST00000505339 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
AC010343.3-203ENST00000505339 SYNJ2O15056 1496 aa13.87□□□□□ -0.19
AC010343.3-203ENST00000505339 CUX1P39880 1505 aa13.82□□□□□ -0.2
AC010343.3-203ENST00000505339 GAPVD1Q14C86 1478 aa13.8□□□□□ -0.2
AC010343.3-203ENST00000505339 PLPPR3Q6T4P5 718 aa13.78□□□□□ -0.2
AC010343.3-203ENST00000505339 WRNQ14191 1432 aaPredicted RBP eCLIP13.76□□□□□ -0.21
AC010343.3-203ENST00000505339 ABCA10Q8WWZ4 1543 aa13.75□□□□□ -0.21
AC010343.3-203ENST00000505339 ABCA5Q8WWZ7 1642 aa13.7□□□□□ -0.22
AC010343.3-203ENST00000505339 NUP160Q12769 1436 aa13.7□□□□□ -0.22
AC010343.3-203ENST00000505339 PBRM1Q86U86 1689 aa13.68□□□□□ -0.22
AC010343.3-203ENST00000505339 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
AC010343.3-203ENST00000505339 TOP2BQ02880 1626 aa13.67□□□□□ -0.22
AC010343.3-203ENST00000505339 KCNA4P22459 653 aa13.66□□□□□ -0.22
AC010343.3-203ENST00000505339 CSRNP3Q8WYN3 585 aa13.65□□□□□ -0.22
AC010343.3-203ENST00000505339 RTN4Q9NQC3 1192 aaKnown RBP13.65□□□□□ -0.22
AC010343.3-203ENST00000505339 BIVM-ERCC5R4GMW8 1640 aa13.64□□□□□ -0.23
AC010343.3-203ENST00000505339 CEP170Q5SW79 1584 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms