RNA–Protein interactions for RNA: ENST00000505098.1

AC008549.3-201, humanhuman

BASIC

Gene AC008549.3, Length 404 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008549.3-201ENST00000505098 NISCHQ9Y2I1 1504 aa25.8■■□□□ 1.72
AC008549.3-201ENST00000505098 CCDC180Q9P1Z9 1646 aa23.05■■□□□ 1.28
AC008549.3-201ENST00000505098 ABCC9O60706 1549 aa22.66■■□□□ 1.22
AC008549.3-201ENST00000505098 RB1CC1Q8TDY2 1594 aa21.78■■□□□ 1.08
AC008549.3-201ENST00000505098 NACADO15069 1562 aa21.72■■□□□ 1.07
AC008549.3-201ENST00000505098 DCAF8L2P0C7V8 631 aa21.64■■□□□ 1.05
AC008549.3-201ENST00000505098 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
AC008549.3-201ENST00000505098 ZCCHC6Q5VYS8 1495 aaKnown RBP21.45■■□□□ 1.02
AC008549.3-201ENST00000505098 DCAF1Q9Y4B6 1507 aa21.37■■□□□ 1.01
AC008549.3-201ENST00000505098 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
AC008549.3-201ENST00000505098 PABPN1Q86U42 306 aaKnown RBP eCLIP21.13■□□□□ 0.97
AC008549.3-201ENST00000505098 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
AC008549.3-201ENST00000505098 SCRIBQ14160 1630 aa20.96■□□□□ 0.95
AC008549.3-201ENST00000505098 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
AC008549.3-201ENST00000505098 DNAJC5BQ9UF47 199 aa20.91■□□□□ 0.94
AC008549.3-201ENST00000505098 EIF4G1Q04637 1599 aaKnown RBP20.55■□□□□ 0.88
AC008549.3-201ENST00000505098 CC2D2AQ9P2K1 1620 aa20.51■□□□□ 0.87
AC008549.3-201ENST00000505098 CECR2Q9BXF3 1484 aa20.41■□□□□ 0.86
AC008549.3-201ENST00000505098 SMARCA4P51532 1647 aa20.05■□□□□ 0.8
AC008549.3-201ENST00000505098 BAZ1AQ9NRL2 1556 aaPredicted RBP20.04■□□□□ 0.8
AC008549.3-201ENST00000505098 NCAPD3P42695 1498 aa20.03■□□□□ 0.8
AC008549.3-201ENST00000505098 SMARCA2P51531 1590 aa20■□□□□ 0.79
AC008549.3-201ENST00000505098 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
AC008549.3-201ENST00000505098 HMGXB3Q12766 1538 aa19.92■□□□□ 0.78
AC008549.3-201ENST00000505098 PEG3Q9GZU2 1588 aa19.87■□□□□ 0.77
AC008549.3-201ENST00000505098 MROH2BQ7Z745 1585 aa19.84■□□□□ 0.77
AC008549.3-201ENST00000505098 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
AC008549.3-201ENST00000505098 WIZO95785 1651 aa19.63■□□□□ 0.73
AC008549.3-201ENST00000505098 ERCC6Q03468 1493 aa19.6■□□□□ 0.73
AC008549.3-201ENST00000505098 RSF1Q96T23 1441 aaPredicted RBP19.57■□□□□ 0.72
AC008549.3-201ENST00000505098 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
AC008549.3-201ENST00000505098 NESP48681 1621 aa19.54■□□□□ 0.72
AC008549.3-201ENST00000505098 CUX2O14529 1486 aa19.47■□□□□ 0.71
AC008549.3-201ENST00000505098 TOP2AP11388 1531 aaKnown RBP19.44■□□□□ 0.7
AC008549.3-201ENST00000505098 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
AC008549.3-201ENST00000505098 PDS5BQ9NTI5 1447 aa19.43■□□□□ 0.7
AC008549.3-201ENST00000505098 KIF21AQ7Z4S6 1674 aa19.33■□□□□ 0.68
AC008549.3-201ENST00000505098 THOC2Q8NI27 1593 aaKnown RBP19.31■□□□□ 0.68
AC008549.3-201ENST00000505098 CFTRP13569 1480 aa19.27■□□□□ 0.67
AC008549.3-201ENST00000505098 MRC2Q9UBG0 1479 aa19.21■□□□□ 0.67
AC008549.3-201ENST00000505098 CEP164Q9UPV0 1460 aa19.21■□□□□ 0.67
AC008549.3-201ENST00000505098 FANCD2Q9BXW9 1451 aa19.2■□□□□ 0.66
AC008549.3-201ENST00000505098 CCDC88BA6NC98 1476 aa19.19■□□□□ 0.66
AC008549.3-201ENST00000505098 WDR62O43379 1518 aa19.14■□□□□ 0.65
AC008549.3-201ENST00000505098 PRDM2Q13029 1718 aa19.14■□□□□ 0.65
AC008549.3-201ENST00000505098 DNAJC5Q9H3Z4 198 aa19.05■□□□□ 0.64
AC008549.3-201ENST00000505098 URB2Q14146 1524 aaKnown RBP18.98■□□□□ 0.63
AC008549.3-201ENST00000505098 SUPT5HO00267 1087 aaKnown RBP18.95■□□□□ 0.62
AC008549.3-201ENST00000505098 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
AC008549.3-201ENST00000505098 TOPBP1Q92547 1522 aa18.86■□□□□ 0.61
AC008549.3-201ENST00000505098 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
AC008549.3-201ENST00000505098 IFT140Q96RY7 1462 aa18.82■□□□□ 0.6
AC008549.3-201ENST00000505098 POLA1P09884 1462 aaPredicted RBP18.69■□□□□ 0.58
AC008549.3-201ENST00000505098 ZNF608Q9ULD9 1512 aaPredicted RBP18.68■□□□□ 0.58
AC008549.3-201ENST00000505098 TARBP1Q13395 1621 aaKnown RBP18.66■□□□□ 0.58
AC008549.3-201ENST00000505098 OSCARQ8IYS5 282 aa18.64■□□□□ 0.57
AC008549.3-201ENST00000505098 SOGA1O94964 1423 aa18.64■□□□□ 0.57
AC008549.3-201ENST00000505098 CUX1P39880 1505 aa18.64■□□□□ 0.57
AC008549.3-201ENST00000505098 EIF4G3O43432 1585 aaKnown RBP18.63■□□□□ 0.57
AC008549.3-201ENST00000505098 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
AC008549.3-201ENST00000505098 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.57
AC008549.3-201ENST00000505098 WDR97A6NE52 1622 aa18.58■□□□□ 0.56
AC008549.3-201ENST00000505098 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.56
AC008549.3-201ENST00000505098 TDRD9Q8NDG6 1382 aaKnown RBP18.52■□□□□ 0.55
AC008549.3-201ENST00000505098 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
AC008549.3-201ENST00000505098 TOP2BQ02880 1626 aa18.46■□□□□ 0.55
AC008549.3-201ENST00000505098 BIVM-ERCC5R4GMW8 1640 aa18.46■□□□□ 0.55
AC008549.3-201ENST00000505098 GRIN2BQ13224 1484 aa18.45■□□□□ 0.54
AC008549.3-201ENST00000505098 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
AC008549.3-201ENST00000505098 FBLN2P98095 1184 aa18.43■□□□□ 0.54
AC008549.3-201ENST00000505098 CHD1O14646 1710 aa18.43■□□□□ 0.54
AC008549.3-201ENST00000505098 MAGI1Q96QZ7 1491 aaPredicted RBP18.42■□□□□ 0.54
AC008549.3-201ENST00000505098 GAPVD1Q14C86 1478 aa18.41■□□□□ 0.54
AC008549.3-201ENST00000505098 SNAPC4Q5SXM2 1469 aa18.41■□□□□ 0.54
AC008549.3-201ENST00000505098 SYNJ1O43426 1573 aa18.4■□□□□ 0.54
AC008549.3-201ENST00000505098 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
AC008549.3-201ENST00000505098 CHMP7Q8WUX9 453 aaPredicted RBP18.37■□□□□ 0.53
AC008549.3-201ENST00000505098 ABCA5Q8WWZ7 1642 aa18.37■□□□□ 0.53
AC008549.3-201ENST00000505098 SYNJ2O15056 1496 aa18.34■□□□□ 0.53
AC008549.3-201ENST00000505098 TRIM41Q8WV44 630 aa18.33■□□□□ 0.52
AC008549.3-201ENST00000505098 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
AC008549.3-201ENST00000505098 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
AC008549.3-201ENST00000505098 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
AC008549.3-201ENST00000505098 ARHGEF11O15085 1522 aa18.28■□□□□ 0.52
AC008549.3-201ENST00000505098 ERICH3Q5RHP9 1530 aa18.24■□□□□ 0.51
AC008549.3-201ENST00000505098 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
AC008549.3-201ENST00000505098 ADAMTS12P58397 1594 aa18.21■□□□□ 0.51
AC008549.3-201ENST00000505098 FHAD1B1AJZ9 1412 aa18.2■□□□□ 0.5
AC008549.3-201ENST00000505098 GRIN2AQ12879 1464 aa18.19■□□□□ 0.5
AC008549.3-201ENST00000505098 CYB5RLQ6IPT4 315 aa18.15■□□□□ 0.5
AC008549.3-201ENST00000505098 KIF27Q86VH2 1401 aa18.14■□□□□ 0.49
AC008549.3-201ENST00000505098 NUP160Q12769 1436 aa18.11■□□□□ 0.49
AC008549.3-201ENST00000505098 ARAP1Q96P48 1450 aa18.11■□□□□ 0.49
AC008549.3-201ENST00000505098 CEP170Q5SW79 1584 aa18.08■□□□□ 0.48
AC008549.3-201ENST00000505098 CUL7Q14999 1698 aa18.05■□□□□ 0.48
AC008549.3-201ENST00000505098 IGF1RP08069 1367 aa18.04■□□□□ 0.48
AC008549.3-201ENST00000505098 SHROOM2Q13796 1616 aa17.99■□□□□ 0.47
AC008549.3-201ENST00000505098 CARMIL1Q5VZK9 1371 aa17.96■□□□□ 0.47
AC008549.3-201ENST00000505098 JPH4Q96JJ6 628 aa17.95■□□□□ 0.46
AC008549.3-201ENST00000505098 RUSC2Q8N2Y8 1516 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms