RNA–Protein interactions for RNA: ENST00000504571.5

ATP2C1-206, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2C1, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-206ENST00000504571 AEBP2Q6ZN18 517 aaPredicted RBP17.01■□□□□ 0.31
ATP2C1-206ENST00000504571 CHIC1Q5VXU3 224 aa16.17■□□□□ 0.18
ATP2C1-206ENST00000504571 SENP3Q9H4L4 574 aaPredicted RBP14.39□□□□□ -0.11
ATP2C1-206ENST00000504571 PHF23Q9BUL5 403 aaPredicted RBP14.29□□□□□ -0.12
ATP2C1-206ENST00000504571 FOXD1Q16676 465 aa13.48□□□□□ -0.25
ATP2C1-206ENST00000504571 PLPPR3Q6T4P5 718 aa12.94□□□□□ -0.34
ATP2C1-206ENST00000504571 PPP6R1Q9UPN7 881 aa12.72□□□□□ -0.37
ATP2C1-206ENST00000504571 ADRA2BP18089 450 aa12.67□□□□□ -0.38
ATP2C1-206ENST00000504571 PIAS4Q8N2W9 510 aaPredicted RBP12.59□□□□□ -0.39
ATP2C1-206ENST00000504571 MSH5O43196 834 aa12.5□□□□□ -0.41
ATP2C1-206ENST00000504571 POTEDQ86YR6 584 aa12.17□□□□□ -0.46
ATP2C1-206ENST00000504571 MAPK8IP2Q13387 824 aaPredicted RBP11.65□□□□□ -0.54
ATP2C1-206ENST00000504571 SCAF1Q9H7N4 1312 aaKnown RBP11.49□□□□□ -0.57
ATP2C1-206ENST00000504571 DMRT2Q9Y5R5 561 aa11.45□□□□□ -0.58
ATP2C1-206ENST00000504571 PPP4R3CPQ6ZMV5 832 aa11.39□□□□□ -0.59
ATP2C1-206ENST00000504571 KCNA4P22459 653 aa11.12□□□□□ -0.63
ATP2C1-206ENST00000504571 CNKSR2Q8WXI2 1034 aa11.12□□□□□ -0.63
ATP2C1-206ENST00000504571 HOXD11P31277 338 aaPredicted RBP11.06□□□□□ -0.64
ATP2C1-206ENST00000504571 DCAF8L1A6NGE4 600 aa11.03□□□□□ -0.64
ATP2C1-206ENST00000504571 RNF216Q9NWF9 866 aaPredicted RBP11□□□□□ -0.65
ATP2C1-206ENST00000504571 NCBP3Q53F19 620 aaKnown RBP10.98□□□□□ -0.65
ATP2C1-206ENST00000504571 NPM3O75607 178 aaKnown RBP10.83□□□□□ -0.68
ATP2C1-206ENST00000504571 CACNB1Q02641 598 aaPredicted RBP10.73□□□□□ -0.69
ATP2C1-206ENST00000504571 RNF39Q9H2S5 420 aa10.71□□□□□ -0.69
ATP2C1-206ENST00000504571 SLC4A1APQ9BWU0 796 aaKnown RBP10.65□□□□□ -0.7
ATP2C1-206ENST00000504571 DNAJC5BQ9UF47 199 aa10.59□□□□□ -0.71
ATP2C1-206ENST00000504571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.56□□□□□ -0.72
ATP2C1-206ENST00000504571 EHMT2Q96KQ7 1210 aa10.55□□□□□ -0.72
ATP2C1-206ENST00000504571 C1QBPQ07021 282 aaKnown RBP10.53□□□□□ -0.72
ATP2C1-206ENST00000504571 U3KPZ7 1027 aaPredicted RBP10.36□□□□□ -0.75
ATP2C1-206ENST00000504571 CSRNP3Q8WYN3 585 aa10.35□□□□□ -0.75
ATP2C1-206ENST00000504571 SLC4A2P04920 1241 aa10.34□□□□□ -0.75
ATP2C1-206ENST00000504571 ZBTB22O15209 634 aa10.22□□□□□ -0.77
ATP2C1-206ENST00000504571 SPINK5Q9NQ38 1064 aaPredicted RBP10.22□□□□□ -0.77
ATP2C1-206ENST00000504571 FOXD4L1Q9NU39 408 aa10.21□□□□□ -0.77
ATP2C1-206ENST00000504571 CAPN15O75808 1086 aa10.17□□□□□ -0.78
ATP2C1-206ENST00000504571 DSG3P32926 999 aa10.08□□□□□ -0.8
ATP2C1-206ENST00000504571 TRHP20396 242 aaPredicted RBP10.05□□□□□ -0.8
ATP2C1-206ENST00000504571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.01□□□□□ -0.81
ATP2C1-206ENST00000504571 HNRNPUL2Q1KMD3 747 aaKnown RBP10.01□□□□□ -0.81
ATP2C1-206ENST00000504571 SAMD1Q6SPF0 538 aaPredicted RBP9.98□□□□□ -0.81
ATP2C1-206ENST00000504571 MYCNP04198 464 aaPredicted RBP9.97□□□□□ -0.81
ATP2C1-206ENST00000504571 APLP2Q06481 763 aa9.97□□□□□ -0.81
ATP2C1-206ENST00000504571 ABCB7O75027 752 aa9.96□□□□□ -0.82
ATP2C1-206ENST00000504571 ZNF219Q9P2Y4 722 aaPredicted RBP9.95□□□□□ -0.82
ATP2C1-206ENST00000504571 ATXN8OSP0DMR3 200 aa9.87□□□□□ -0.83
ATP2C1-206ENST00000504571 ATF5Q9Y2D1 282 aaPredicted RBP9.83□□□□□ -0.84
ATP2C1-206ENST00000504571 POLA2Q14181 598 aa9.79□□□□□ -0.84
ATP2C1-206ENST00000504571 RBM42Q9BTD8 480 aaKnown RBP9.54□□□□□ -0.88
ATP2C1-206ENST00000504571 POTEHQ6S545 545 aa9.51□□□□□ -0.89
ATP2C1-206ENST00000504571 ZBTB12Q9Y330 459 aaPredicted RBP9.48□□□□□ -0.89
ATP2C1-206ENST00000504571 OSCARQ8IYS5 282 aa9.46□□□□□ -0.9
ATP2C1-206ENST00000504571 AKT1S1Q96B36 256 aa9.37□□□□□ -0.91
ATP2C1-206ENST00000504571 MKRN4PQ13434 485 aaPredicted RBP9.35□□□□□ -0.91
ATP2C1-206ENST00000504571 FKBP8Q14318 412 aa9.35□□□□□ -0.91
ATP2C1-206ENST00000504571 CHRDL2Q6WN34 429 aa9.35□□□□□ -0.91
ATP2C1-206ENST00000504571 FBLN2P98095 1184 aa9.33□□□□□ -0.92
ATP2C1-206ENST00000504571 REM2Q8IYK8 340 aaPredicted RBP9.33□□□□□ -0.92
ATP2C1-206ENST00000504571 SPDYE2BA6NHP3 402 aa9.24□□□□□ -0.93
ATP2C1-206ENST00000504571 SPDYE6P0CI01 402 aa9.24□□□□□ -0.93
ATP2C1-206ENST00000504571 SPDYE2Q495Y8 402 aa9.24□□□□□ -0.93
ATP2C1-206ENST00000504571 PITPNM1O00562 1244 aa9.22□□□□□ -0.93
ATP2C1-206ENST00000504571 ZNF692Q9BU19 519 aaPredicted RBP9.19□□□□□ -0.94
ATP2C1-206ENST00000504571 PIP4P2Q8N4L2 257 aa9.17□□□□□ -0.94
ATP2C1-206ENST00000504571 SPDYE4A6NLX3 237 aa9.16□□□□□ -0.94
ATP2C1-206ENST00000504571 SSUH2Q9Y2M2 353 aa9.14□□□□□ -0.95
ATP2C1-206ENST00000504571 FXR2P51116 673 aaKnown RBP eCLIP9.11□□□□□ -0.95
ATP2C1-206ENST00000504571 CLEC11AQ9Y240 323 aa9.11□□□□□ -0.95
ATP2C1-206ENST00000504571 PABPN1Q86U42 306 aaKnown RBP eCLIP9.07□□□□□ -0.96
ATP2C1-206ENST00000504571 SPDYE1Q8NFV5 336 aaPredicted RBP9.06□□□□□ -0.96
ATP2C1-206ENST00000504571 PROM2Q8N271 834 aa9.05□□□□□ -0.96
ATP2C1-206ENST00000504571 FBXO3Q9UK99 471 aa9.02□□□□□ -0.97
ATP2C1-206ENST00000504571 HAX1O00165 279 aa8.99□□□□□ -0.97
ATP2C1-206ENST00000504571 PRKAR2AP13861 404 aaKnown RBP8.99□□□□□ -0.97
ATP2C1-206ENST00000504571 RTN4Q9NQC3 1192 aaKnown RBP8.97□□□□□ -0.97
ATP2C1-206ENST00000504571 PRR29P0C7W0 189 aa8.95□□□□□ -0.98
ATP2C1-206ENST00000504571 CHADLQ6NUI6 762 aa8.95□□□□□ -0.98
ATP2C1-206ENST00000504571 EVX2Q03828 476 aa8.94□□□□□ -0.98
ATP2C1-206ENST00000504571 SP7Q8TDD2 431 aaPredicted RBP8.94□□□□□ -0.98
ATP2C1-206ENST00000504571 AMER1Q5JTC6 1135 aaPredicted RBP8.92□□□□□ -0.98
ATP2C1-206ENST00000504571 VASPP50552 380 aaPredicted RBP8.85□□□□□ -0.99
ATP2C1-206ENST00000504571 STAG3Q9UJ98 1225 aa8.82□□□□□ -1
ATP2C1-206ENST00000504571 C19orf67A6NJJ6 358 aa8.81□□□□□ -1
ATP2C1-206ENST00000504571 FARP1Q9Y4F1 1045 aaPredicted RBP8.78□□□□□ -1
ATP2C1-206ENST00000504571 CREBZFQ9NS37 354 aa8.76□□□□□ -1.01
ATP2C1-206ENST00000504571 IFNLR1Q8IU57 520 aaPredicted RBP8.72□□□□□ -1.01
ATP2C1-206ENST00000504571 CD44P16070 742 aaKnown RBP8.7□□□□□ -1.02
ATP2C1-206ENST00000504571 GABBR2O75899 941 aa8.69□□□□□ -1.02
ATP2C1-206ENST00000504571 PLCD3Q8N3E9 789 aa8.68□□□□□ -1.02
ATP2C1-206ENST00000504571 MIER1Q8N108 512 aa8.66□□□□□ -1.02
ATP2C1-206ENST00000504571 KLHL34Q8N239 644 aa8.66□□□□□ -1.02
ATP2C1-206ENST00000504571 PLEKHG5O94827 1062 aa8.65□□□□□ -1.02
ATP2C1-206ENST00000504571 MNX1P50219 401 aaPredicted RBP8.62□□□□□ -1.03
ATP2C1-206ENST00000504571 SPOCK2Q92563 424 aa8.62□□□□□ -1.03
ATP2C1-206ENST00000504571 ZBTB47Q9UFB7 747 aaPredicted RBP8.62□□□□□ -1.03
ATP2C1-206ENST00000504571 ZRANB1Q9UGI0 708 aa8.61□□□□□ -1.03
ATP2C1-206ENST00000504571 SLC24A1O60721 1099 aa8.6□□□□□ -1.03
ATP2C1-206ENST00000504571 NPM1P06748 294 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATP2C1-206ENST00000504571 POTEIP0CG38 1075 aa8.53□□□□□ -1.04
ATP2C1-206ENST00000504571 ZNF579Q8NAF0 562 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms