RNA–Protein interactions for RNA: ENST00000504343.1

CNOT6-204, Transcript of CCR4-NOT transcription complex subunit 6, humanhuman

TSL 3

Gene CNOT6, Length 706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6-204ENST00000504343 AEBP2Q6ZN18 517 aaPredicted RBP18.3■□□□□ 0.52
CNOT6-204ENST00000504343 CHIC1Q5VXU3 224 aa17.46■□□□□ 0.39
CNOT6-204ENST00000504343 SENP3Q9H4L4 574 aaPredicted RBP15.58■□□□□ 0.08
CNOT6-204ENST00000504343 PHF23Q9BUL5 403 aaPredicted RBP15.42■□□□□ 0.06
CNOT6-204ENST00000504343 FOXD1Q16676 465 aa14.53□□□□□ -0.08
CNOT6-204ENST00000504343 PLPPR3Q6T4P5 718 aa13.99□□□□□ -0.17
CNOT6-204ENST00000504343 PPP6R1Q9UPN7 881 aa13.67□□□□□ -0.22
CNOT6-204ENST00000504343 ADRA2BP18089 450 aa13.63□□□□□ -0.23
CNOT6-204ENST00000504343 PIAS4Q8N2W9 510 aaPredicted RBP13.58□□□□□ -0.24
CNOT6-204ENST00000504343 MSH5O43196 834 aa13.54□□□□□ -0.24
CNOT6-204ENST00000504343 POTEDQ86YR6 584 aa13.07□□□□□ -0.32
CNOT6-204ENST00000504343 MAPK8IP2Q13387 824 aaPredicted RBP12.5□□□□□ -0.41
CNOT6-204ENST00000504343 SCAF1Q9H7N4 1312 aaKnown RBP12.46□□□□□ -0.41
CNOT6-204ENST00000504343 DMRT2Q9Y5R5 561 aa12.38□□□□□ -0.43
CNOT6-204ENST00000504343 PPP4R3CPQ6ZMV5 832 aa12.29□□□□□ -0.44
CNOT6-204ENST00000504343 CNKSR2Q8WXI2 1034 aa12.03□□□□□ -0.48
CNOT6-204ENST00000504343 HOXD11P31277 338 aaPredicted RBP11.96□□□□□ -0.49
CNOT6-204ENST00000504343 RNF216Q9NWF9 866 aaPredicted RBP11.89□□□□□ -0.51
CNOT6-204ENST00000504343 DCAF8L1A6NGE4 600 aa11.87□□□□□ -0.51
CNOT6-204ENST00000504343 NCBP3Q53F19 620 aaKnown RBP11.84□□□□□ -0.51
CNOT6-204ENST00000504343 NPM3O75607 178 aaKnown RBP11.67□□□□□ -0.54
CNOT6-204ENST00000504343 CACNB1Q02641 598 aaPredicted RBP11.58□□□□□ -0.56
CNOT6-204ENST00000504343 RNF39Q9H2S5 420 aa11.57□□□□□ -0.56
CNOT6-204ENST00000504343 KCNA4P22459 653 aa11.53□□□□□ -0.56
CNOT6-204ENST00000504343 DNAJC5BQ9UF47 199 aa11.51□□□□□ -0.57
CNOT6-204ENST00000504343 C1QBPQ07021 282 aaKnown RBP11.41□□□□□ -0.58
CNOT6-204ENST00000504343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.41□□□□□ -0.58
CNOT6-204ENST00000504343 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
CNOT6-204ENST00000504343 SLC4A2P04920 1241 aa11.13□□□□□ -0.63
CNOT6-204ENST00000504343 SLC4A1APQ9BWU0 796 aaKnown RBP11□□□□□ -0.65
CNOT6-204ENST00000504343 SPINK5Q9NQ38 1064 aaPredicted RBP10.99□□□□□ -0.65
CNOT6-204ENST00000504343 CAPN15O75808 1086 aa10.96□□□□□ -0.65
CNOT6-204ENST00000504343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.87□□□□□ -0.67
CNOT6-204ENST00000504343 DSG3P32926 999 aa10.87□□□□□ -0.67
CNOT6-204ENST00000504343 HNRNPUL2Q1KMD3 747 aaKnown RBP10.87□□□□□ -0.67
CNOT6-204ENST00000504343 APLP2Q06481 763 aa10.85□□□□□ -0.67
CNOT6-204ENST00000504343 SAMD1Q6SPF0 538 aaPredicted RBP10.82□□□□□ -0.68
CNOT6-204ENST00000504343 TRHP20396 242 aaPredicted RBP10.81□□□□□ -0.68
CNOT6-204ENST00000504343 MYCNP04198 464 aaPredicted RBP10.77□□□□□ -0.69
CNOT6-204ENST00000504343 ZNF219Q9P2Y4 722 aaPredicted RBP10.76□□□□□ -0.69
CNOT6-204ENST00000504343 ABCB7O75027 752 aa10.72□□□□□ -0.69
CNOT6-204ENST00000504343 FOXD4L1Q9NU39 408 aa10.71□□□□□ -0.69
CNOT6-204ENST00000504343 EHMT2Q96KQ7 1210 aa10.64□□□□□ -0.71
CNOT6-204ENST00000504343 ZBTB22O15209 634 aa10.6□□□□□ -0.71
CNOT6-204ENST00000504343 POLA2Q14181 598 aa10.56□□□□□ -0.72
CNOT6-204ENST00000504343 ATF5Q9Y2D1 282 aaPredicted RBP10.54□□□□□ -0.72
CNOT6-204ENST00000504343 CSRNP3Q8WYN3 585 aa10.39□□□□□ -0.75
CNOT6-204ENST00000504343 ATXN8OSP0DMR3 200 aa10.38□□□□□ -0.75
CNOT6-204ENST00000504343 RBM42Q9BTD8 480 aaKnown RBP10.35□□□□□ -0.75
CNOT6-204ENST00000504343 ZBTB12Q9Y330 459 aaPredicted RBP10.32□□□□□ -0.76
CNOT6-204ENST00000504343 POTEHQ6S545 545 aa10.26□□□□□ -0.77
CNOT6-204ENST00000504343 OSCARQ8IYS5 282 aa10.18□□□□□ -0.78
CNOT6-204ENST00000504343 AKT1S1Q96B36 256 aa10.15□□□□□ -0.78
CNOT6-204ENST00000504343 FBLN2P98095 1184 aa10.11□□□□□ -0.79
CNOT6-204ENST00000504343 CHRDL2Q6WN34 429 aa10.11□□□□□ -0.79
CNOT6-204ENST00000504343 REM2Q8IYK8 340 aaPredicted RBP10.07□□□□□ -0.8
CNOT6-204ENST00000504343 MKRN4PQ13434 485 aaPredicted RBP10.06□□□□□ -0.8
CNOT6-204ENST00000504343 SPDYE2BA6NHP3 402 aa10.01□□□□□ -0.81
CNOT6-204ENST00000504343 SPDYE6P0CI01 402 aa10.01□□□□□ -0.81
CNOT6-204ENST00000504343 SPDYE2Q495Y8 402 aa10.01□□□□□ -0.81
CNOT6-204ENST00000504343 PITPNM1O00562 1244 aa9.95□□□□□ -0.82
CNOT6-204ENST00000504343 ZNF692Q9BU19 519 aaPredicted RBP9.93□□□□□ -0.82
CNOT6-204ENST00000504343 PIP4P2Q8N4L2 257 aa9.89□□□□□ -0.83
CNOT6-204ENST00000504343 SSUH2Q9Y2M2 353 aa9.89□□□□□ -0.83
CNOT6-204ENST00000504343 FXR2P51116 673 aaKnown RBP eCLIP9.84□□□□□ -0.83
CNOT6-204ENST00000504343 SPDYE1Q8NFV5 336 aaPredicted RBP9.81□□□□□ -0.84
CNOT6-204ENST00000504343 CLEC11AQ9Y240 323 aa9.8□□□□□ -0.84
CNOT6-204ENST00000504343 PABPN1Q86U42 306 aaKnown RBP eCLIP9.78□□□□□ -0.84
CNOT6-204ENST00000504343 HAX1O00165 279 aa9.7□□□□□ -0.86
CNOT6-204ENST00000504343 PRKAR2AP13861 404 aaKnown RBP9.69□□□□□ -0.86
CNOT6-204ENST00000504343 PRR29P0C7W0 189 aa9.66□□□□□ -0.86
CNOT6-204ENST00000504343 SP7Q8TDD2 431 aaPredicted RBP9.66□□□□□ -0.86
CNOT6-204ENST00000504343 SPDYE4A6NLX3 237 aa9.63□□□□□ -0.87
CNOT6-204ENST00000504343 CHADLQ6NUI6 762 aa9.61□□□□□ -0.87
CNOT6-204ENST00000504343 EVX2Q03828 476 aa9.6□□□□□ -0.87
CNOT6-204ENST00000504343 FKBP8Q14318 412 aa9.54□□□□□ -0.88
CNOT6-204ENST00000504343 C19orf67A6NJJ6 358 aa9.53□□□□□ -0.88
CNOT6-204ENST00000504343 STAG3Q9UJ98 1225 aa9.52□□□□□ -0.89
CNOT6-204ENST00000504343 FARP1Q9Y4F1 1045 aaPredicted RBP9.48□□□□□ -0.89
CNOT6-204ENST00000504343 CREBZFQ9NS37 354 aa9.44□□□□□ -0.9
CNOT6-204ENST00000504343 FBXO3Q9UK99 471 aa9.42□□□□□ -0.9
CNOT6-204ENST00000504343 PROM2Q8N271 834 aa9.4□□□□□ -0.9
CNOT6-204ENST00000504343 CD44P16070 742 aaKnown RBP9.39□□□□□ -0.91
CNOT6-204ENST00000504343 GABBR2O75899 941 aa9.37□□□□□ -0.91
CNOT6-204ENST00000504343 PLEKHG5O94827 1062 aa9.35□□□□□ -0.91
CNOT6-204ENST00000504343 MNX1P50219 401 aaPredicted RBP9.28□□□□□ -0.92
CNOT6-204ENST00000504343 ZRANB1Q9UGI0 708 aa9.28□□□□□ -0.92
CNOT6-204ENST00000504343 NPM1P06748 294 aaKnown RBP eCLIP9.26□□□□□ -0.93
CNOT6-204ENST00000504343 ZNF579Q8NAF0 562 aaKnown RBP9.24□□□□□ -0.93
CNOT6-204ENST00000504343 CLCN6P51797 869 aa9.23□□□□□ -0.93
CNOT6-204ENST00000504343 MYT1Q01538 1121 aa9.22□□□□□ -0.93
CNOT6-204ENST00000504343 PAK3O75914 559 aaPredicted RBP9.2□□□□□ -0.94
CNOT6-204ENST00000504343 MIER1Q8N108 512 aa9.2□□□□□ -0.94
CNOT6-204ENST00000504343 ZBTB47Q9UFB7 747 aaPredicted RBP9.19□□□□□ -0.94
CNOT6-204ENST00000504343 PLCD3Q8N3E9 789 aa9.18□□□□□ -0.94
CNOT6-204ENST00000504343 POTEIP0CG38 1075 aa9.17□□□□□ -0.94
CNOT6-204ENST00000504343 PELP1Q8IZL8 1130 aaKnown RBP9.16□□□□□ -0.94
CNOT6-204ENST00000504343 PHF12Q96QT6 1004 aa9.16□□□□□ -0.94
CNOT6-204ENST00000504343 DCBLD2Q96PD2 775 aa9.14□□□□□ -0.95
CNOT6-204ENST00000504343 GALR2O43603 387 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms