RNA–Protein interactions for RNA: ENST00000503501.1

SENP6-212, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 2,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-212ENST00000503501 POTEDQ86YR6 584 aa12.44□□□□□ -0.42
SENP6-212ENST00000503501 AEBP2Q6ZN18 517 aaPredicted RBP11.54□□□□□ -0.56
SENP6-212ENST00000503501 CHIC1Q5VXU3 224 aa10.68□□□□□ -0.7
SENP6-212ENST00000503501 SENP3Q9H4L4 574 aaPredicted RBP10.06□□□□□ -0.8
SENP6-212ENST00000503501 PHF23Q9BUL5 403 aaPredicted RBP9.72□□□□□ -0.85
SENP6-212ENST00000503501 MSH5O43196 834 aa9.64□□□□□ -0.87
SENP6-212ENST00000503501 FOXD1Q16676 465 aa9.63□□□□□ -0.87
SENP6-212ENST00000503501 POTEHQ6S545 545 aa9.39□□□□□ -0.91
SENP6-212ENST00000503501 CACNB1Q02641 598 aaPredicted RBP9.38□□□□□ -0.91
SENP6-212ENST00000503501 PIAS4Q8N2W9 510 aaPredicted RBP8.56□□□□□ -1.04
SENP6-212ENST00000503501 PLSCR2Q9NRY7 297 aa8.51□□□□□ -1.05
SENP6-212ENST00000503501 RNF39Q9H2S5 420 aa8.08□□□□□ -1.12
SENP6-212ENST00000503501 SP7Q8TDD2 431 aaPredicted RBP7.97□□□□□ -1.13
SENP6-212ENST00000503501 PLPPR3Q6T4P5 718 aa7.95□□□□□ -1.14
SENP6-212ENST00000503501 PPP6R1Q9UPN7 881 aa7.88□□□□□ -1.15
SENP6-212ENST00000503501 ADRA2BP18089 450 aa7.85□□□□□ -1.15
SENP6-212ENST00000503501 C1QBPQ07021 282 aaKnown RBP7.85□□□□□ -1.15
SENP6-212ENST00000503501 DMRT2Q9Y5R5 561 aa7.72□□□□□ -1.17
SENP6-212ENST00000503501 DCAF8L1A6NGE4 600 aa7.52□□□□□ -1.21
SENP6-212ENST00000503501 MAPK8IP2Q13387 824 aaPredicted RBP7.48□□□□□ -1.21
SENP6-212ENST00000503501 LHX8Q68G74 356 aa7.46□□□□□ -1.22
SENP6-212ENST00000503501 PCDH10Q9P2E7 1040 aa7.37□□□□□ -1.23
SENP6-212ENST00000503501 CHRDL2Q6WN34 429 aa7.26□□□□□ -1.25
SENP6-212ENST00000503501 SCAF1Q9H7N4 1312 aaKnown RBP7.23□□□□□ -1.25
SENP6-212ENST00000503501 POTEMA6NI47 508 aa7.14□□□□□ -1.27
SENP6-212ENST00000503501 HAX1O00165 279 aa7.07□□□□□ -1.28
SENP6-212ENST00000503501 POTEGQ6S5H5 508 aa7.04□□□□□ -1.28
SENP6-212ENST00000503501 DSG3P32926 999 aa7□□□□□ -1.29
SENP6-212ENST00000503501 HOXD11P31277 338 aaPredicted RBP6.96□□□□□ -1.29
SENP6-212ENST00000503501 PPP4R3CPQ6ZMV5 832 aa6.93□□□□□ -1.3
SENP6-212ENST00000503501 EVX2Q03828 476 aa6.89□□□□□ -1.31
SENP6-212ENST00000503501 DNAJC5BQ9UF47 199 aa6.89□□□□□ -1.31
SENP6-212ENST00000503501 CNKSR2Q8WXI2 1034 aa6.87□□□□□ -1.31
SENP6-212ENST00000503501 RNF216Q9NWF9 866 aaPredicted RBP6.86□□□□□ -1.31
SENP6-212ENST00000503501 PIP4P2Q8N4L2 257 aa6.72□□□□□ -1.33
SENP6-212ENST00000503501 RBM42Q9BTD8 480 aaKnown RBP6.7□□□□□ -1.34
SENP6-212ENST00000503501 NCBP3Q53F19 620 aaKnown RBP6.64□□□□□ -1.35
SENP6-212ENST00000503501 CAPN15O75808 1086 aa6.62□□□□□ -1.35
SENP6-212ENST00000503501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.6□□□□□ -1.351e-6■□□□□ 10.1
SENP6-212ENST00000503501 GABBR2O75899 941 aa6.6□□□□□ -1.35
SENP6-212ENST00000503501 SPINK5Q9NQ38 1064 aaPredicted RBP6.57□□□□□ -1.36
SENP6-212ENST00000503501 OTUD5Q96G74 571 aa6.55□□□□□ -1.36
SENP6-212ENST00000503501 NPM3O75607 178 aaKnown RBP6.5□□□□□ -1.37
SENP6-212ENST00000503501 POTEIP0CG38 1075 aa6.47□□□□□ -1.37
SENP6-212ENST00000503501 U3KPZ7 1027 aaPredicted RBP6.45□□□□□ -1.38
SENP6-212ENST00000503501 MMRN1Q13201 1228 aa6.41□□□□□ -1.38
SENP6-212ENST00000503501 LCE2DQ5TA82 110 aaPredicted RBP6.39□□□□□ -1.39
SENP6-212ENST00000503501 FXR2P51116 673 aaKnown RBP eCLIP6.38□□□□□ -1.399e-8■■■□□ 18.9
SENP6-212ENST00000503501 CDAN1Q8IWY9 1227 aa6.35□□□□□ -1.39
SENP6-212ENST00000503501 ABCB7O75027 752 aa6.33□□□□□ -1.4
SENP6-212ENST00000503501 APLP2Q06481 763 aa6.31□□□□□ -1.4
SENP6-212ENST00000503501 SLC4A2P04920 1241 aa6.26□□□□□ -1.41
SENP6-212ENST00000503501 ZNF219Q9P2Y4 722 aaPredicted RBP6.26□□□□□ -1.41
SENP6-212ENST00000503501 C19orf67A6NJJ6 358 aa6.25□□□□□ -1.41
SENP6-212ENST00000503501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.23□□□□□ -1.41
SENP6-212ENST00000503501 POTEB2H3BUK9 544 aa6.23□□□□□ -1.41
SENP6-212ENST00000503501 TRHP20396 242 aaPredicted RBP6.23□□□□□ -1.41
SENP6-212ENST00000503501 HNRNPUL2Q1KMD3 747 aaKnown RBP6.23□□□□□ -1.41
SENP6-212ENST00000503501 FAM163AQ96GL9 167 aaPredicted RBP6.23□□□□□ -1.41
SENP6-212ENST00000503501 SPNS2Q8IVW8 549 aa6.22□□□□□ -1.41
SENP6-212ENST00000503501 KCNA4P22459 653 aa6.2□□□□□ -1.42
SENP6-212ENST00000503501 SAMD1Q6SPF0 538 aaPredicted RBP6.18□□□□□ -1.42
SENP6-212ENST00000503501 AKT1S1Q96B36 256 aa6.16□□□□□ -1.42
SENP6-212ENST00000503501 REM2Q8IYK8 340 aaPredicted RBP6.13□□□□□ -1.43
SENP6-212ENST00000503501 PITPNM1O00562 1244 aa6.1□□□□□ -1.43
SENP6-212ENST00000503501 CLCN6P51797 869 aa6.06□□□□□ -1.44
SENP6-212ENST00000503501 MYCNP04198 464 aaPredicted RBP6.05□□□□□ -1.44
SENP6-212ENST00000503501 DCBLD2Q96PD2 775 aa6.04□□□□□ -1.44
SENP6-212ENST00000503501 POLA2Q14181 598 aa6.03□□□□□ -1.44
SENP6-212ENST00000503501 ZBTB12Q9Y330 459 aaPredicted RBP5.96□□□□□ -1.46
SENP6-212ENST00000503501 PRKAR2AP13861 404 aaKnown RBP5.92□□□□□ -1.46
SENP6-212ENST00000503501 MAMSTRQ6ZN01 415 aa5.91□□□□□ -1.46
SENP6-212ENST00000503501 FOXD4L1Q9NU39 408 aa5.88□□□□□ -1.47
SENP6-212ENST00000503501 ATF5Q9Y2D1 282 aaPredicted RBP5.87□□□□□ -1.47
SENP6-212ENST00000503501 POTEJP0CG39 1038 aa5.84□□□□□ -1.47
SENP6-212ENST00000503501 OSCARQ8IYS5 282 aa5.84□□□□□ -1.47
SENP6-212ENST00000503501 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.48
SENP6-212ENST00000503501 KRTAP4-6Q9BYQ5 205 aa5.84□□□□□ -1.48
SENP6-212ENST00000503501 SLC4A1APQ9BWU0 796 aaKnown RBP5.83□□□□□ -1.48
SENP6-212ENST00000503501 ATXN8OSP0DMR3 200 aa5.75□□□□□ -1.49
SENP6-212ENST00000503501 SPDYE2BA6NHP3 402 aa5.74□□□□□ -1.49
SENP6-212ENST00000503501 SPDYE6P0CI01 402 aa5.74□□□□□ -1.49
SENP6-212ENST00000503501 SPDYE2Q495Y8 402 aa5.74□□□□□ -1.49
SENP6-212ENST00000503501 FBLN2P98095 1184 aa5.7□□□□□ -1.5
SENP6-212ENST00000503501 ZBTB22O15209 634 aa5.69□□□□□ -1.5
SENP6-212ENST00000503501 SPDYE1Q8NFV5 336 aaPredicted RBP5.69□□□□□ -1.5
SENP6-212ENST00000503501 SCUBE2Q9NQ36 999 aa5.68□□□□□ -1.5
SENP6-212ENST00000503501 SSUH2Q9Y2M2 353 aa5.64□□□□□ -1.51
SENP6-212ENST00000503501 ST18O60284 1047 aa5.63□□□□□ -1.51
SENP6-212ENST00000503501 CD44P16070 742 aaKnown RBP5.62□□□□□ -1.51
SENP6-212ENST00000503501 CLEC11AQ9Y240 323 aa5.62□□□□□ -1.51
SENP6-212ENST00000503501 MKRN4PQ13434 485 aaPredicted RBP5.62□□□□□ -1.51
SENP6-212ENST00000503501 ZNF692Q9BU19 519 aaPredicted RBP5.6□□□□□ -1.51
SENP6-212ENST00000503501 PELP1Q8IZL8 1130 aaKnown RBP5.6□□□□□ -1.51
SENP6-212ENST00000503501 METRNQ9UJH8 293 aa5.55□□□□□ -1.52
SENP6-212ENST00000503501 CHADLQ6NUI6 762 aa5.54□□□□□ -1.52
SENP6-212ENST00000503501 GALR2O43603 387 aaPredicted RBP5.53□□□□□ -1.52
SENP6-212ENST00000503501 PRR29P0C7W0 189 aa5.53□□□□□ -1.52
SENP6-212ENST00000503501 PABPN1Q86U42 306 aaKnown RBP eCLIP5.52□□□□□ -1.53
SENP6-212ENST00000503501 KRTAP3-3Q9BYR6 98 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms