RNA–Protein interactions for RNA: ENST00000502692.5

ACTN3-201, Transcript of actinin alpha 3 (gene/pseudogene), humanhuman

TSL 2 BASIC

Gene ACTN3, Length 3,084 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN3-201ENST00000502692 NISCHQ9Y2I1 1504 aa25.44■■□□□ 1.66
ACTN3-201ENST00000502692 CCDC180Q9P1Z9 1646 aa22.44■■□□□ 1.18
ACTN3-201ENST00000502692 ABCC9O60706 1549 aa21.67■■□□□ 1.06
ACTN3-201ENST00000502692 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
ACTN3-201ENST00000502692 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
ACTN3-201ENST00000502692 DCAF1Q9Y4B6 1507 aa21.05■□□□□ 0.96
ACTN3-201ENST00000502692 NACADO15069 1562 aa21.05■□□□□ 0.96
ACTN3-201ENST00000502692 RB1CC1Q8TDY2 1594 aa21■□□□□ 0.95
ACTN3-201ENST00000502692 MYO15BQ96JP2 1530 aa21■□□□□ 0.95
ACTN3-201ENST00000502692 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
ACTN3-201ENST00000502692 SCRIBQ14160 1630 aa20.55■□□□□ 0.88
ACTN3-201ENST00000502692 UNC13AQ9UPW8 1703 aa20.4■□□□□ 0.86
ACTN3-201ENST00000502692 PABPN1Q86U42 306 aaKnown RBP eCLIP20.33■□□□□ 0.84
ACTN3-201ENST00000502692 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
ACTN3-201ENST00000502692 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
ACTN3-201ENST00000502692 CECR2Q9BXF3 1484 aa19.76■□□□□ 0.75
ACTN3-201ENST00000502692 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
ACTN3-201ENST00000502692 BAZ1AQ9NRL2 1556 aaPredicted RBP19.73■□□□□ 0.75
ACTN3-201ENST00000502692 SMARCA4P51532 1647 aa19.66■□□□□ 0.74
ACTN3-201ENST00000502692 MROH2BQ7Z745 1585 aa19.6■□□□□ 0.73
ACTN3-201ENST00000502692 CC2D2AQ9P2K1 1620 aa19.57■□□□□ 0.72
ACTN3-201ENST00000502692 RSF1Q96T23 1441 aaPredicted RBP19.53■□□□□ 0.72
ACTN3-201ENST00000502692 SMARCA2P51531 1590 aa19.51■□□□□ 0.71
ACTN3-201ENST00000502692 ATAD2BQ9ULI0 1458 aa19.47■□□□□ 0.71
ACTN3-201ENST00000502692 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
ACTN3-201ENST00000502692 DNAJC5BQ9UF47 199 aa19.45■□□□□ 0.7
ACTN3-201ENST00000502692 PEG3Q9GZU2 1588 aa19.42■□□□□ 0.7
ACTN3-201ENST00000502692 WIZO95785 1651 aa19.41■□□□□ 0.7
ACTN3-201ENST00000502692 NCAPD3P42695 1498 aa19.39■□□□□ 0.7
ACTN3-201ENST00000502692 BAZ1BQ9UIG0 1483 aaKnown RBP19.39■□□□□ 0.69
ACTN3-201ENST00000502692 HMGXB3Q12766 1538 aa19.34■□□□□ 0.69
ACTN3-201ENST00000502692 TOP2AP11388 1531 aaKnown RBP19.26■□□□□ 0.67
ACTN3-201ENST00000502692 CCDC88BA6NC98 1476 aa19.02■□□□□ 0.63
ACTN3-201ENST00000502692 HRCP23327 699 aa19.01■□□□□ 0.63
ACTN3-201ENST00000502692 LOC105371045A0A1W2PR82 267 aa18.93■□□□□ 0.62
ACTN3-201ENST00000502692 CADPSQ9ULU8 1353 aa18.89■□□□□ 0.61
ACTN3-201ENST00000502692 PPARGC1BQ86YN6 1023 aaKnown RBP18.87■□□□□ 0.61
ACTN3-201ENST00000502692 LAMC3Q9Y6N6 1575 aa18.84■□□□□ 0.61
ACTN3-201ENST00000502692 CFTRP13569 1480 aa18.82■□□□□ 0.6
ACTN3-201ENST00000502692 NESP48681 1621 aa18.81■□□□□ 0.6
ACTN3-201ENST00000502692 TRIM41Q8WV44 630 aa18.77■□□□□ 0.6
ACTN3-201ENST00000502692 PDS5BQ9NTI5 1447 aa18.77■□□□□ 0.6
ACTN3-201ENST00000502692 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
ACTN3-201ENST00000502692 PCGF6Q9BYE7 350 aa18.71■□□□□ 0.59
ACTN3-201ENST00000502692 PRDM2Q13029 1718 aa18.68■□□□□ 0.58
ACTN3-201ENST00000502692 FANCD2Q9BXW9 1451 aa18.68■□□□□ 0.58
ACTN3-201ENST00000502692 FAM9AQ8IZU1 332 aaPredicted RBP18.67■□□□□ 0.58
ACTN3-201ENST00000502692 PELP1Q8IZL8 1130 aaKnown RBP18.66■□□□□ 0.58
ACTN3-201ENST00000502692 CEP164Q9UPV0 1460 aa18.64■□□□□ 0.57
ACTN3-201ENST00000502692 KIF21AQ7Z4S6 1674 aa18.58■□□□□ 0.56
ACTN3-201ENST00000502692 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
ACTN3-201ENST00000502692 MRC2Q9UBG0 1479 aa18.52■□□□□ 0.55
ACTN3-201ENST00000502692 ABCC8Q09428 1581 aa18.47■□□□□ 0.55
ACTN3-201ENST00000502692 WRNQ14191 1432 aaPredicted RBP eCLIP18.46■□□□□ 0.55
ACTN3-201ENST00000502692 DNMBPQ6XZF7 1577 aa18.41■□□□□ 0.54
ACTN3-201ENST00000502692 URB2Q14146 1524 aaKnown RBP18.41■□□□□ 0.54
ACTN3-201ENST00000502692 THOC2Q8NI27 1593 aaKnown RBP18.41■□□□□ 0.54
ACTN3-201ENST00000502692 TOPBP1Q92547 1522 aa18.4■□□□□ 0.54
ACTN3-201ENST00000502692 WDR62O43379 1518 aa18.39■□□□□ 0.53
ACTN3-201ENST00000502692 CUX1P39880 1505 aa18.37■□□□□ 0.53
ACTN3-201ENST00000502692 TOP2BQ02880 1626 aa18.33■□□□□ 0.52
ACTN3-201ENST00000502692 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
ACTN3-201ENST00000502692 CUX2O14529 1486 aa18.3■□□□□ 0.52
ACTN3-201ENST00000502692 TRIM26Q12899 539 aaPredicted RBP18.3■□□□□ 0.52
ACTN3-201ENST00000502692 BIVM-ERCC5R4GMW8 1640 aa18.3■□□□□ 0.52
ACTN3-201ENST00000502692 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
ACTN3-201ENST00000502692 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
ACTN3-201ENST00000502692 SOGA1O94964 1423 aa18.24■□□□□ 0.51
ACTN3-201ENST00000502692 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
ACTN3-201ENST00000502692 IFT140Q96RY7 1462 aa18.22■□□□□ 0.51
ACTN3-201ENST00000502692 RAD54L2Q9Y4B4 1467 aa18.18■□□□□ 0.5
ACTN3-201ENST00000502692 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
ACTN3-201ENST00000502692 TARBP1Q13395 1621 aaKnown RBP18.11■□□□□ 0.49
ACTN3-201ENST00000502692 TDRD9Q8NDG6 1382 aaKnown RBP18.09■□□□□ 0.49
ACTN3-201ENST00000502692 KIF27Q86VH2 1401 aa18.08■□□□□ 0.48
ACTN3-201ENST00000502692 ZNF608Q9ULD9 1512 aaPredicted RBP18.05■□□□□ 0.48
ACTN3-201ENST00000502692 RUSC2Q8N2Y8 1516 aa18.04■□□□□ 0.48
ACTN3-201ENST00000502692 WDR97A6NE52 1622 aa18.04■□□□□ 0.48
ACTN3-201ENST00000502692 AQRO60306 1485 aaKnown RBP eCLIP18.04■□□□□ 0.48
ACTN3-201ENST00000502692 MYT1Q01538 1121 aa18.03■□□□□ 0.48
ACTN3-201ENST00000502692 GAPVD1Q14C86 1478 aa18.03■□□□□ 0.48
ACTN3-201ENST00000502692 EIF4G3O43432 1585 aaKnown RBP18.01■□□□□ 0.47
ACTN3-201ENST00000502692 EEA1Q15075 1411 aa17.99■□□□□ 0.47
ACTN3-201ENST00000502692 CSRNP3Q8WYN3 585 aa17.98■□□□□ 0.47
ACTN3-201ENST00000502692 GRIN2BQ13224 1484 aa17.98■□□□□ 0.47
ACTN3-201ENST00000502692 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
ACTN3-201ENST00000502692 UBTFP17480 764 aaKnown RBP17.93■□□□□ 0.46
ACTN3-201ENST00000502692 ERICH3Q5RHP9 1530 aa17.92■□□□□ 0.46
ACTN3-201ENST00000502692 PBRM1Q86U86 1689 aa17.91■□□□□ 0.46
ACTN3-201ENST00000502692 SNAPC4Q5SXM2 1469 aa17.89■□□□□ 0.45
ACTN3-201ENST00000502692 TTBK1Q5TCY1 1321 aaPredicted RBP17.89■□□□□ 0.45
ACTN3-201ENST00000502692 IGF1RP08069 1367 aa17.89■□□□□ 0.45
ACTN3-201ENST00000502692 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
ACTN3-201ENST00000502692 CEP162Q5TB80 1403 aa17.88■□□□□ 0.45
ACTN3-201ENST00000502692 FBLN2P98095 1184 aa17.87■□□□□ 0.45
ACTN3-201ENST00000502692 CHMP7Q8WUX9 453 aaPredicted RBP17.86■□□□□ 0.45
ACTN3-201ENST00000502692 TNIKQ9UKE5 1360 aa17.85■□□□□ 0.45
ACTN3-201ENST00000502692 CARMIL1Q5VZK9 1371 aa17.84■□□□□ 0.45
ACTN3-201ENST00000502692 CUL7Q14999 1698 aa17.84■□□□□ 0.45
ACTN3-201ENST00000502692 FHAD1B1AJZ9 1412 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 233.3 ms