RNA–Protein interactions for RNA: ENST00000499504.7

AP001528.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP001528.1, Length 1,223 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001528.1-201ENST00000499504 AEBP2Q6ZN18 517 aaPredicted RBP34.02■■■■□ 3.04
AP001528.1-201ENST00000499504 CHIC1Q5VXU3 224 aa32.26■■■□□ 2.75
AP001528.1-201ENST00000499504 SENP3Q9H4L4 574 aaPredicted RBP28.96■■■□□ 2.23
AP001528.1-201ENST00000499504 PHF23Q9BUL5 403 aaPredicted RBP28.62■■■□□ 2.17
AP001528.1-201ENST00000499504 NISCHQ9Y2I1 1504 aa28.19■■■□□ 2.1
AP001528.1-201ENST00000499504 FOXD1Q16676 465 aa27.04■■□□□ 1.92
AP001528.1-201ENST00000499504 PLPPR3Q6T4P5 718 aa25.75■■□□□ 1.71
AP001528.1-201ENST00000499504 PPP6R1Q9UPN7 881 aa25.31■■□□□ 1.64
AP001528.1-201ENST00000499504 MSH5O43196 834 aa25.26■■□□□ 1.63
AP001528.1-201ENST00000499504 PIAS4Q8N2W9 510 aaPredicted RBP25.25■■□□□ 1.63
AP001528.1-201ENST00000499504 ADRA2BP18089 450 aa25.21■■□□□ 1.63
AP001528.1-201ENST00000499504 CCDC180Q9P1Z9 1646 aa24.97■■□□□ 1.59
AP001528.1-201ENST00000499504 POTEDQ86YR6 584 aa24.72■■□□□ 1.55
AP001528.1-201ENST00000499504 ABCC9O60706 1549 aa23.68■■□□□ 1.38
AP001528.1-201ENST00000499504 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
AP001528.1-201ENST00000499504 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
AP001528.1-201ENST00000499504 MYO15BQ96JP2 1530 aa23.39■■□□□ 1.34
AP001528.1-201ENST00000499504 NACADO15069 1562 aa23.28■■□□□ 1.32
AP001528.1-201ENST00000499504 MAPK8IP2Q13387 824 aaPredicted RBP23.17■■□□□ 1.3
AP001528.1-201ENST00000499504 RB1CC1Q8TDY2 1594 aa23.16■■□□□ 1.3
AP001528.1-201ENST00000499504 DCAF8L2P0C7V8 631 aa23.06■■□□□ 1.28
AP001528.1-201ENST00000499504 SCAF1Q9H7N4 1312 aaKnown RBP23■■□□□ 1.27
AP001528.1-201ENST00000499504 DMRT2Q9Y5R5 561 aa22.98■■□□□ 1.27
AP001528.1-201ENST00000499504 UNC13AQ9UPW8 1703 aa22.71■■□□□ 1.23
AP001528.1-201ENST00000499504 SCRIBQ14160 1630 aa22.63■■□□□ 1.21
AP001528.1-201ENST00000499504 PPP4R3CPQ6ZMV5 832 aa22.59■■□□□ 1.21
AP001528.1-201ENST00000499504 BICRAQ9NZM4 1560 aa22.43■■□□□ 1.18
AP001528.1-201ENST00000499504 SHROOM4Q9ULL8 1493 aa22.35■■□□□ 1.17
AP001528.1-201ENST00000499504 CNKSR2Q8WXI2 1034 aa22.16■■□□□ 1.14
AP001528.1-201ENST00000499504 HOXD11P31277 338 aaPredicted RBP22.13■■□□□ 1.13
AP001528.1-201ENST00000499504 PABPN1Q86U42 306 aaKnown RBP eCLIP22.13■■□□□ 1.13
AP001528.1-201ENST00000499504 DCAF8L1A6NGE4 600 aa22.05■■□□□ 1.12
AP001528.1-201ENST00000499504 RNF216Q9NWF9 866 aaPredicted RBP21.96■■□□□ 1.11
AP001528.1-201ENST00000499504 BAZ1AQ9NRL2 1556 aaPredicted RBP21.84■■□□□ 1.09
AP001528.1-201ENST00000499504 CECR2Q9BXF3 1484 aa21.82■■□□□ 1.08
AP001528.1-201ENST00000499504 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
AP001528.1-201ENST00000499504 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
AP001528.1-201ENST00000499504 CACNB1Q02641 598 aaPredicted RBP21.71■■□□□ 1.07
AP001528.1-201ENST00000499504 NCBP3Q53F19 620 aaKnown RBP21.69■■□□□ 1.06
AP001528.1-201ENST00000499504 MROH2BQ7Z745 1585 aa21.69■■□□□ 1.06
AP001528.1-201ENST00000499504 PEG3Q9GZU2 1588 aa21.64■■□□□ 1.05
AP001528.1-201ENST00000499504 RSF1Q96T23 1441 aaPredicted RBP21.62■■□□□ 1.05
AP001528.1-201ENST00000499504 RNF39Q9H2S5 420 aa21.58■■□□□ 1.05
AP001528.1-201ENST00000499504 SMARCA2P51531 1590 aa21.55■■□□□ 1.04
AP001528.1-201ENST00000499504 CC2D2AQ9P2K1 1620 aa21.55■■□□□ 1.04
AP001528.1-201ENST00000499504 WIZO95785 1651 aa21.5■■□□□ 1.03
AP001528.1-201ENST00000499504 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
AP001528.1-201ENST00000499504 NCAPD3P42695 1498 aa21.45■■□□□ 1.02
AP001528.1-201ENST00000499504 HMGXB3Q12766 1538 aa21.43■■□□□ 1.02
AP001528.1-201ENST00000499504 NPM3O75607 178 aaKnown RBP21.42■■□□□ 1.02
AP001528.1-201ENST00000499504 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
AP001528.1-201ENST00000499504 DNAJC5BQ9UF47 199 aa21.33■■□□□ 1.01
AP001528.1-201ENST00000499504 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
AP001528.1-201ENST00000499504 SUPT5HO00267 1087 aaKnown RBP21.27■■□□□ 1
AP001528.1-201ENST00000499504 C1QBPQ07021 282 aaKnown RBP21.24■□□□□ 0.99
AP001528.1-201ENST00000499504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.09■□□□□ 0.97
AP001528.1-201ENST00000499504 CCDC88BA6NC98 1476 aa21.02■□□□□ 0.96
AP001528.1-201ENST00000499504 KCNA4P22459 653 aa21.01■□□□□ 0.95
AP001528.1-201ENST00000499504 PRDM2Q13029 1718 aa20.86■□□□□ 0.93
AP001528.1-201ENST00000499504 LAMC3Q9Y6N6 1575 aa20.83■□□□□ 0.92
AP001528.1-201ENST00000499504 CFTRP13569 1480 aa20.81■□□□□ 0.92
AP001528.1-201ENST00000499504 CADPSQ9ULU8 1353 aa20.8■□□□□ 0.92
AP001528.1-201ENST00000499504 U3KPZ7 1027 aaPredicted RBP20.66■□□□□ 0.9
AP001528.1-201ENST00000499504 NESP48681 1621 aa20.66■□□□□ 0.9
AP001528.1-201ENST00000499504 PDS5BQ9NTI5 1447 aa20.6■□□□□ 0.89
AP001528.1-201ENST00000499504 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
AP001528.1-201ENST00000499504 FANCD2Q9BXW9 1451 aa20.54■□□□□ 0.88
AP001528.1-201ENST00000499504 CEP164Q9UPV0 1460 aa20.49■□□□□ 0.87
AP001528.1-201ENST00000499504 SLC4A2P04920 1241 aa20.47■□□□□ 0.87
AP001528.1-201ENST00000499504 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
AP001528.1-201ENST00000499504 BIVM-ERCC5R4GMW8 1640 aa20.38■□□□□ 0.85
AP001528.1-201ENST00000499504 ERCC6Q03468 1493 aa20.38■□□□□ 0.85
AP001528.1-201ENST00000499504 SPINK5Q9NQ38 1064 aaPredicted RBP20.38■□□□□ 0.85
AP001528.1-201ENST00000499504 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.85
AP001528.1-201ENST00000499504 DNMBPQ6XZF7 1577 aa20.36■□□□□ 0.85
AP001528.1-201ENST00000499504 THOC2Q8NI27 1593 aaKnown RBP20.36■□□□□ 0.85
AP001528.1-201ENST00000499504 MRC2Q9UBG0 1479 aa20.36■□□□□ 0.85
AP001528.1-201ENST00000499504 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
AP001528.1-201ENST00000499504 WDR62O43379 1518 aa20.32■□□□□ 0.84
AP001528.1-201ENST00000499504 CUX1P39880 1505 aa20.32■□□□□ 0.84
AP001528.1-201ENST00000499504 CAPN15O75808 1086 aa20.32■□□□□ 0.84
AP001528.1-201ENST00000499504 SYNJ1O43426 1573 aa20.31■□□□□ 0.84
AP001528.1-201ENST00000499504 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
AP001528.1-201ENST00000499504 TOPBP1Q92547 1522 aa20.29■□□□□ 0.84
AP001528.1-201ENST00000499504 DSG3P32926 999 aa20.21■□□□□ 0.83
AP001528.1-201ENST00000499504 FGD5Q6ZNL6 1462 aa20.16■□□□□ 0.82
AP001528.1-201ENST00000499504 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
AP001528.1-201ENST00000499504 TRIM41Q8WV44 630 aa20.14■□□□□ 0.81
AP001528.1-201ENST00000499504 CUX2O14529 1486 aa20.11■□□□□ 0.81
AP001528.1-201ENST00000499504 WDR97A6NE52 1622 aa20.1■□□□□ 0.81
AP001528.1-201ENST00000499504 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
AP001528.1-201ENST00000499504 IFT140Q96RY7 1462 aa20.06■□□□□ 0.8
AP001528.1-201ENST00000499504 ABCA10Q8WWZ4 1543 aa20.05■□□□□ 0.8
AP001528.1-201ENST00000499504 SOGA1O94964 1423 aa20.03■□□□□ 0.8
AP001528.1-201ENST00000499504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.01■□□□□ 0.79
AP001528.1-201ENST00000499504 APLP2Q06481 763 aa20.01■□□□□ 0.79
AP001528.1-201ENST00000499504 HNRNPUL2Q1KMD3 747 aaKnown RBP20.01■□□□□ 0.79
AP001528.1-201ENST00000499504 TRHP20396 242 aaPredicted RBP20■□□□□ 0.79
AP001528.1-201ENST00000499504 RAD54L2Q9Y4B4 1467 aa19.99■□□□□ 0.79
AP001528.1-201ENST00000499504 ABCA5Q8WWZ7 1642 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms