RNA–Protein interactions for RNA: ENST00000498740.1

ACTR8-206, Transcript of ARP8 actin related protein 8 homolog, humanhuman

TSL 3

Gene ACTR8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR8-206ENST00000498740 NISCHQ9Y2I1 1504 aa54.03■■■■■ 6.24
ACTR8-206ENST00000498740 ABCC9O60706 1549 aa48.58■■■■■ 5.37
ACTR8-206ENST00000498740 CCDC180Q9P1Z9 1646 aa48.54■■■■■ 5.36
ACTR8-206ENST00000498740 RB1CC1Q8TDY2 1594 aa46.29■■■■■ 5
ACTR8-206ENST00000498740 NACADO15069 1562 aa45.96■■■■■ 4.95
ACTR8-206ENST00000498740 DCAF8L2P0C7V8 631 aa45.67■■■■■ 4.9
ACTR8-206ENST00000498740 DNAJC5BQ9UF47 199 aa45.57■■■■■ 4.89
ACTR8-206ENST00000498740 MYO15BQ96JP2 1530 aa45.35■■■■■ 4.85
ACTR8-206ENST00000498740 PABPN1Q86U42 306 aaKnown RBP eCLIP45.21■■■■■ 4.83
ACTR8-206ENST00000498740 UNC13AQ9UPW8 1703 aa45.03■■■■■ 4.8
ACTR8-206ENST00000498740 BICRAQ9NZM4 1560 aa44.82■■■■■ 4.76
ACTR8-206ENST00000498740 ZCCHC6Q5VYS8 1495 aaKnown RBP44.77■■■■■ 4.76
ACTR8-206ENST00000498740 DCAF1Q9Y4B6 1507 aa44.7■■■■■ 4.75
ACTR8-206ENST00000498740 SHROOM4Q9ULL8 1493 aa44.43■■■■■ 4.7
ACTR8-206ENST00000498740 SCRIBQ14160 1630 aa44.15■■■■■ 4.66
ACTR8-206ENST00000498740 CC2D2AQ9P2K1 1620 aa43.87■■■■■ 4.61
ACTR8-206ENST00000498740 CECR2Q9BXF3 1484 aa43.83■■■■■ 4.61
ACTR8-206ENST00000498740 EIF4G1Q04637 1599 aaKnown RBP43.8■■■■■ 4.6
ACTR8-206ENST00000498740 NCAPD3P42695 1498 aa42.43■■■■■ 4.38
ACTR8-206ENST00000498740 ATAD2BQ9ULI0 1458 aa42.24■■■■■ 4.35
ACTR8-206ENST00000498740 SMARCA2P51531 1590 aa42.18■■■■■ 4.34
ACTR8-206ENST00000498740 SMARCA4P51532 1647 aa42.14■■■■■ 4.34
ACTR8-206ENST00000498740 HMGXB3Q12766 1538 aa42.1■■■■■ 4.33
ACTR8-206ENST00000498740 DNAJC5Q9H3Z4 198 aa42.06■■■■■ 4.32
ACTR8-206ENST00000498740 ERCC6Q03468 1493 aa42.04■■■■■ 4.32
ACTR8-206ENST00000498740 CUX2O14529 1486 aa42.03■■■■■ 4.32
ACTR8-206ENST00000498740 BAZ1AQ9NRL2 1556 aaPredicted RBP42.01■■■■■ 4.32
ACTR8-206ENST00000498740 BAZ1BQ9UIG0 1483 aaKnown RBP41.86■■■■■ 4.29
ACTR8-206ENST00000498740 PEG3Q9GZU2 1588 aa41.79■■■■■ 4.28
ACTR8-206ENST00000498740 NESP48681 1621 aa41.66■■■■■ 4.26
ACTR8-206ENST00000498740 MROH2BQ7Z745 1585 aa41.57■■■■■ 4.25
ACTR8-206ENST00000498740 LAMC3Q9Y6N6 1575 aa41.49■■■■■ 4.23
ACTR8-206ENST00000498740 PDS5BQ9NTI5 1447 aa41.31■■■■■ 4.2
ACTR8-206ENST00000498740 THOC2Q8NI27 1593 aaKnown RBP41.29■■■■■ 4.2
ACTR8-206ENST00000498740 CADPSQ9ULU8 1353 aa41.14■■■■■ 4.18
ACTR8-206ENST00000498740 KIF21AQ7Z4S6 1674 aa41.1■■■■■ 4.17
ACTR8-206ENST00000498740 WIZO95785 1651 aa41.04■■■■■ 4.16
ACTR8-206ENST00000498740 MRC2Q9UBG0 1479 aa40.9■■■■■ 4.14
ACTR8-206ENST00000498740 WDR62O43379 1518 aa40.77■■■■■ 4.12
ACTR8-206ENST00000498740 RSF1Q96T23 1441 aaPredicted RBP40.73■■■■■ 4.11
ACTR8-206ENST00000498740 CEP164Q9UPV0 1460 aa40.72■■■■■ 4.11
ACTR8-206ENST00000498740 FANCD2Q9BXW9 1451 aa40.64■■■■■ 4.1
ACTR8-206ENST00000498740 CFTRP13569 1480 aa40.64■■■■■ 4.1
ACTR8-206ENST00000498740 TOP2AP11388 1531 aaKnown RBP40.62■■■■■ 4.09
ACTR8-206ENST00000498740 URB2Q14146 1524 aaKnown RBP40.25■■■■■ 4.03
ACTR8-206ENST00000498740 TRIM41Q8WV44 630 aa40.15■■■■■ 4.02
ACTR8-206ENST00000498740 CCDC88BA6NC98 1476 aa40.13■■■■■ 4.01
ACTR8-206ENST00000498740 PRDM2Q13029 1718 aa40.12■■■■■ 4.01
ACTR8-206ENST00000498740 OSCARQ8IYS5 282 aa40.1■■■■■ 4.01
ACTR8-206ENST00000498740 IFT140Q96RY7 1462 aa39.93■■■■□ 3.98
ACTR8-206ENST00000498740 ABCC8Q09428 1581 aa39.88■■■■□ 3.97
ACTR8-206ENST00000498740 TOPBP1Q92547 1522 aa39.84■■■■□ 3.97
ACTR8-206ENST00000498740 ZNF608Q9ULD9 1512 aaPredicted RBP39.75■■■■□ 3.95
ACTR8-206ENST00000498740 DNMBPQ6XZF7 1577 aa39.71■■■■□ 3.95
ACTR8-206ENST00000498740 EIF4G3O43432 1585 aaKnown RBP39.55■■■■□ 3.92
ACTR8-206ENST00000498740 RIMBP3CA6NJZ7 1639 aa39.45■■■■□ 3.91
ACTR8-206ENST00000498740 RIMBP3BA6NNM3 1639 aa39.45■■■■□ 3.91
ACTR8-206ENST00000498740 TARBP1Q13395 1621 aaKnown RBP39.45■■■■□ 3.91
ACTR8-206ENST00000498740 RIMBP3Q9UFD9 1639 aa39.45■■■■□ 3.91
ACTR8-206ENST00000498740 POLA1P09884 1462 aaPredicted RBP39.43■■■■□ 3.9
ACTR8-206ENST00000498740 AQRO60306 1485 aaKnown RBP eCLIP39.41■■■■□ 3.93e-6■■■■□ 25.5
ACTR8-206ENST00000498740 ARHGEF11O15085 1522 aa39.37■■■■□ 3.89
ACTR8-206ENST00000498740 SOGA1O94964 1423 aa39.29■■■■□ 3.88
ACTR8-206ENST00000498740 FBLN2P98095 1184 aa39.24■■■■□ 3.87
ACTR8-206ENST00000498740 RAD54L2Q9Y4B4 1467 aa39.24■■■■□ 3.87
ACTR8-206ENST00000498740 CHD1O14646 1710 aa39.22■■■■□ 3.87
ACTR8-206ENST00000498740 WDR97A6NE52 1622 aa39.18■■■■□ 3.86
ACTR8-206ENST00000498740 TDRD9Q8NDG6 1382 aaKnown RBP39.18■■■■□ 3.86
ACTR8-206ENST00000498740 FGD5Q6ZNL6 1462 aa39.17■■■■□ 3.86
ACTR8-206ENST00000498740 CYB5RLQ6IPT4 315 aa39.11■■■■□ 3.85
ACTR8-206ENST00000498740 CUX1P39880 1505 aa39.07■■■■□ 3.84
ACTR8-206ENST00000498740 SNAPC4Q5SXM2 1469 aa39.04■■■■□ 3.84
ACTR8-206ENST00000498740 MAGI1Q96QZ7 1491 aaPredicted RBP39■■■■□ 3.83
ACTR8-206ENST00000498740 CHMP7Q8WUX9 453 aaPredicted RBP38.98■■■■□ 3.83
ACTR8-206ENST00000498740 GRIN2BQ13224 1484 aa38.98■■■■□ 3.83
ACTR8-206ENST00000498740 ARAP1Q96P48 1450 aa38.95■■■■□ 3.83
ACTR8-206ENST00000498740 SYNJ1O43426 1573 aa38.89■■■■□ 3.82
ACTR8-206ENST00000498740 SYNJ2O15056 1496 aa38.86■■■■□ 3.81
ACTR8-206ENST00000498740 SUPT5HO00267 1087 aaKnown RBP38.85■■■■□ 3.81
ACTR8-206ENST00000498740 CLASP1Q7Z460 1538 aa38.84■■■■□ 3.81
ACTR8-206ENST00000498740 GAPVD1Q14C86 1478 aa38.8■■■■□ 3.8
ACTR8-206ENST00000498740 ABCA10Q8WWZ4 1543 aa38.75■■■■□ 3.79
ACTR8-206ENST00000498740 TRHP20396 242 aaPredicted RBP38.75■■■■□ 3.79
ACTR8-206ENST00000498740 PBRM1Q86U86 1689 aa38.69■■■■□ 3.78
ACTR8-206ENST00000498740 ABCA5Q8WWZ7 1642 aa38.64■■■■□ 3.78
ACTR8-206ENST00000498740 WRNQ14191 1432 aaPredicted RBP eCLIP38.63■■■■□ 3.77
ACTR8-206ENST00000498740 TOP2BQ02880 1626 aa38.47■■■■□ 3.75
ACTR8-206ENST00000498740 GRIN2AQ12879 1464 aa38.45■■■■□ 3.75
ACTR8-206ENST00000498740 BIVM-ERCC5R4GMW8 1640 aa38.45■■■■□ 3.75
ACTR8-206ENST00000498740 ADAMTS12P58397 1594 aa38.37■■■■□ 3.73
ACTR8-206ENST00000498740 FHAD1B1AJZ9 1412 aa38.34■■■■□ 3.73
ACTR8-206ENST00000498740 NUP160Q12769 1436 aa38.32■■■■□ 3.73
ACTR8-206ENST00000498740 ERICH3Q5RHP9 1530 aa38.28■■■■□ 3.72
ACTR8-206ENST00000498740 CEP170Q5SW79 1584 aa38.24■■■■□ 3.71
ACTR8-206ENST00000498740 ERCC6L2Q5T890 1561 aa38.14■■■■□ 3.7
ACTR8-206ENST00000498740 SHROOM2Q13796 1616 aa38.12■■■■□ 3.69
ACTR8-206ENST00000498740 PRG4Q92954 1404 aaPredicted RBP37.96■■■■□ 3.67
ACTR8-206ENST00000498740 JPH4Q96JJ6 628 aa37.95■■■■□ 3.67
ACTR8-206ENST00000498740 RUSC2Q8N2Y8 1516 aa37.83■■■■□ 3.65
ACTR8-206ENST00000498740 KIF27Q86VH2 1401 aa37.8■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms