RNA–Protein interactions for RNA: ENST00000498414.5

RPP21-229, Transcript of ribonuclease P/MRP subunit p21, humanhuman

TSL 5

Gene RPP21, Length 1,492 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP21-229ENST00000498414 NISCHQ9Y2I1 1504 aa58.11■■■■■ 6.89
RPP21-229ENST00000498414 CCDC180Q9P1Z9 1646 aa51.74■■■■■ 5.87
RPP21-229ENST00000498414 ABCC9O60706 1549 aa50.46■■■■■ 5.67
RPP21-229ENST00000498414 RB1CC1Q8TDY2 1594 aa48.61■■■■■ 5.37
RPP21-229ENST00000498414 NACADO15069 1562 aa48.56■■■■■ 5.36
RPP21-229ENST00000498414 ZCCHC6Q5VYS8 1495 aaKnown RBP48.43■■■■■ 5.34
RPP21-229ENST00000498414 DCAF8L2P0C7V8 631 aa48.35■■■■■ 5.33
RPP21-229ENST00000498414 MYO15BQ96JP2 1530 aa48.28■■■■■ 5.32
RPP21-229ENST00000498414 DCAF1Q9Y4B6 1507 aa48.1■■■■■ 5.29
RPP21-229ENST00000498414 UNC13AQ9UPW8 1703 aa47.62■■■■■ 5.21
RPP21-229ENST00000498414 BICRAQ9NZM4 1560 aa47.16■■■■■ 5.14
RPP21-229ENST00000498414 SCRIBQ14160 1630 aa47.15■■■■■ 5.14
RPP21-229ENST00000498414 PABPN1Q86U42 306 aaKnown RBP eCLIP47.08■■■■■ 5.13
RPP21-229ENST00000498414 SHROOM4Q9ULL8 1493 aa46.66■■■■■ 5.06
RPP21-229ENST00000498414 DNAJC5BQ9UF47 199 aa46.23■■■■■ 4.99
RPP21-229ENST00000498414 EIF4G1Q04637 1599 aaKnown RBP45.89■■■■■ 4.94
RPP21-229ENST00000498414 CC2D2AQ9P2K1 1620 aa45.7■■■■■ 4.91
RPP21-229ENST00000498414 CECR2Q9BXF3 1484 aa45.33■■■■■ 4.85
RPP21-229ENST00000498414 SMARCA4P51532 1647 aa45.12■■■■■ 4.81
RPP21-229ENST00000498414 BAZ1AQ9NRL2 1556 aaPredicted RBP45.04■■■■■ 4.8
RPP21-229ENST00000498414 ATAD2BQ9ULI0 1458 aa44.81■■■■■ 4.76
RPP21-229ENST00000498414 SMARCA2P51531 1590 aa44.78■■■■■ 4.76
RPP21-229ENST00000498414 MROH2BQ7Z745 1585 aa44.78■■■■■ 4.76
RPP21-229ENST00000498414 NCAPD3P42695 1498 aa44.76■■■■■ 4.76
RPP21-229ENST00000498414 PEG3Q9GZU2 1588 aa44.68■■■■■ 4.74
RPP21-229ENST00000498414 HMGXB3Q12766 1538 aa44.61■■■■■ 4.73
RPP21-229ENST00000498414 BAZ1BQ9UIG0 1483 aaKnown RBP44.44■■■■■ 4.71
RPP21-229ENST00000498414 WIZO95785 1651 aa44.33■■■■■ 4.69
RPP21-229ENST00000498414 RSF1Q96T23 1441 aaPredicted RBP44.25■■■■■ 4.67
RPP21-229ENST00000498414 TOP2AP11388 1531 aaKnown RBP43.86■■■■■ 4.61
RPP21-229ENST00000498414 NESP48681 1621 aa43.7■■■■■ 4.59
RPP21-229ENST00000498414 LAMC3Q9Y6N6 1575 aa43.62■■■■■ 4.57
RPP21-229ENST00000498414 ERCC6Q03468 1493 aa43.47■■■■■ 4.55
RPP21-229ENST00000498414 CADPSQ9ULU8 1353 aa43.44■■■■■ 4.54
RPP21-229ENST00000498414 CCDC88BA6NC98 1476 aa43.29■■■■■ 4.52
RPP21-229ENST00000498414 KIF21AQ7Z4S6 1674 aa43.27■■■■■ 4.52
RPP21-229ENST00000498414 PDS5BQ9NTI5 1447 aa43.26■■■■■ 4.52
RPP21-229ENST00000498414 CFTRP13569 1480 aa43.22■■■■■ 4.51
RPP21-229ENST00000498414 THOC2Q8NI27 1593 aaKnown RBP43.11■■■■■ 4.49
RPP21-229ENST00000498414 SUPT5HO00267 1087 aaKnown RBP43.06■■■■■ 4.48
RPP21-229ENST00000498414 PRDM2Q13029 1718 aa43.06■■■■■ 4.48
RPP21-229ENST00000498414 CUX2O14529 1486 aa43.04■■■■■ 4.48
RPP21-229ENST00000498414 FANCD2Q9BXW9 1451 aa42.97■■■■■ 4.47
RPP21-229ENST00000498414 CEP164Q9UPV0 1460 aa42.92■■■■■ 4.46
RPP21-229ENST00000498414 MRC2Q9UBG0 1479 aa42.86■■■■■ 4.45
RPP21-229ENST00000498414 WDR62O43379 1518 aa42.75■■■■■ 4.43
RPP21-229ENST00000498414 URB2Q14146 1524 aaKnown RBP42.57■■■■■ 4.4
RPP21-229ENST00000498414 TOPBP1Q92547 1522 aa42.31■■■■■ 4.36
RPP21-229ENST00000498414 DNMBPQ6XZF7 1577 aa42.29■■■■■ 4.36
RPP21-229ENST00000498414 ABCC8Q09428 1581 aa42.28■■■■■ 4.36
RPP21-229ENST00000498414 CUX1P39880 1505 aa42.02■■■■■ 4.32
RPP21-229ENST00000498414 IFT140Q96RY7 1462 aa42.02■■■■■ 4.32
RPP21-229ENST00000498414 POLA1P09884 1462 aaPredicted RBP41.95■■■■■ 4.31
RPP21-229ENST00000498414 TARBP1Q13395 1621 aaKnown RBP41.89■■■■■ 4.3
RPP21-229ENST00000498414 FGD5Q6ZNL6 1462 aa41.85■■■■■ 4.29
RPP21-229ENST00000498414 ZNF608Q9ULD9 1512 aaPredicted RBP41.83■■■■■ 4.29
RPP21-229ENST00000498414 RAD54L2Q9Y4B4 1467 aa41.75■■■■■ 4.27
RPP21-229ENST00000498414 EIF4G3O43432 1585 aaKnown RBP41.73■■■■■ 4.27
RPP21-229ENST00000498414 SOGA1O94964 1423 aa41.73■■■■■ 4.27
RPP21-229ENST00000498414 WRNQ14191 1432 aaPredicted RBP eCLIP41.72■■■■■ 4.27
RPP21-229ENST00000498414 BIVM-ERCC5R4GMW8 1640 aa41.72■■■■■ 4.27
RPP21-229ENST00000498414 TOP2BQ02880 1626 aa41.69■■■■■ 4.26
RPP21-229ENST00000498414 SYNJ1O43426 1573 aa41.68■■■■■ 4.26
RPP21-229ENST00000498414 WDR97A6NE52 1622 aa41.61■■■■■ 4.25
RPP21-229ENST00000498414 DNAJC5Q9H3Z4 198 aa41.6■■■■■ 4.25
RPP21-229ENST00000498414 AQRO60306 1485 aaKnown RBP eCLIP41.57■■■■■ 4.245e-7■■■■□ 19.7
RPP21-229ENST00000498414 TDRD9Q8NDG6 1382 aaKnown RBP41.48■■■■■ 4.23
RPP21-229ENST00000498414 ABCA10Q8WWZ4 1543 aa41.46■■■■■ 4.23
RPP21-229ENST00000498414 ABCA5Q8WWZ7 1642 aa41.34■■■■■ 4.21
RPP21-229ENST00000498414 PBRM1Q86U86 1689 aa41.29■■■■■ 4.2
RPP21-229ENST00000498414 GRIN2BQ13224 1484 aa41.27■■■■■ 4.2
RPP21-229ENST00000498414 GAPVD1Q14C86 1478 aa41.27■■■■■ 4.2
RPP21-229ENST00000498414 CHD1O14646 1710 aa41.23■■■■■ 4.19
RPP21-229ENST00000498414 SNAPC4Q5SXM2 1469 aa41.22■■■■■ 4.19
RPP21-229ENST00000498414 MAGI1Q96QZ7 1491 aaPredicted RBP41.17■■■■■ 4.18
RPP21-229ENST00000498414 OSCARQ8IYS5 282 aa41.16■■■■■ 4.18
RPP21-229ENST00000498414 SYNJ2O15056 1496 aa41.01■■■■■ 4.15
RPP21-229ENST00000498414 FBLN2P98095 1184 aa40.98■■■■■ 4.15
RPP21-229ENST00000498414 ERICH3Q5RHP9 1530 aa40.97■■■■■ 4.15
RPP21-229ENST00000498414 ADAMTS12P58397 1594 aa40.94■■■■■ 4.14
RPP21-229ENST00000498414 CHMP7Q8WUX9 453 aaPredicted RBP40.89■■■■■ 4.14
RPP21-229ENST00000498414 KIF27Q86VH2 1401 aa40.83■■■■■ 4.13
RPP21-229ENST00000498414 FHAD1B1AJZ9 1412 aa40.8■■■■■ 4.12
RPP21-229ENST00000498414 GRIN2AQ12879 1464 aa40.75■■■■■ 4.11
RPP21-229ENST00000498414 CLASP1Q7Z460 1538 aa40.75■■■■■ 4.11
RPP21-229ENST00000498414 TRIM41Q8WV44 630 aa40.67■■■■■ 4.1
RPP21-229ENST00000498414 CUL7Q14999 1698 aa40.65■■■■■ 4.1
RPP21-229ENST00000498414 IGF1RP08069 1367 aa40.65■■■■■ 4.1
RPP21-229ENST00000498414 RIMBP3CA6NJZ7 1639 aa40.64■■■■■ 4.1
RPP21-229ENST00000498414 RIMBP3BA6NNM3 1639 aa40.64■■■■■ 4.1
RPP21-229ENST00000498414 RIMBP3Q9UFD9 1639 aa40.64■■■■■ 4.1
RPP21-229ENST00000498414 ARHGEF11O15085 1522 aa40.61■■■■■ 4.09
RPP21-229ENST00000498414 CEP170Q5SW79 1584 aa40.59■■■■■ 4.09
RPP21-229ENST00000498414 NUP160Q12769 1436 aa40.57■■■■■ 4.08
RPP21-229ENST00000498414 RUSC2Q8N2Y8 1516 aa40.49■■■■■ 4.07
RPP21-229ENST00000498414 CARMIL1Q5VZK9 1371 aa40.4■■■■■ 4.06
RPP21-229ENST00000498414 SHROOM2Q13796 1616 aa40.33■■■■■ 4.05
RPP21-229ENST00000498414 ARAP1Q96P48 1450 aa40.29■■■■■ 4.04
RPP21-229ENST00000498414 CHIC1Q5VXU3 224 aa40.24■■■■■ 4.03
RPP21-229ENST00000498414 RAPGEF2Q9Y4G8 1499 aa40.2■■■■■ 4.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms