RNA–Protein interactions for RNA: ENST00000498220.1

TMEM222-209, Transcript of transmembrane protein 222, humanhuman

TSL 3

Gene TMEM222, Length 679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM222-209ENST00000498220 NISCHQ9Y2I1 1504 aa19.43■□□□□ 0.7
TMEM222-209ENST00000498220 CCDC180Q9P1Z9 1646 aa16.99■□□□□ 0.31
TMEM222-209ENST00000498220 ZCCHC6Q5VYS8 1495 aaKnown RBP16.35■□□□□ 0.21
TMEM222-209ENST00000498220 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.18
TMEM222-209ENST00000498220 MYO15BQ96JP2 1530 aa15.95■□□□□ 0.14
TMEM222-209ENST00000498220 ABCC9O60706 1549 aa15.89■□□□□ 0.13
TMEM222-209ENST00000498220 DCAF8L2P0C7V8 631 aa15.86■□□□□ 0.13
TMEM222-209ENST00000498220 NACADO15069 1562 aa15.8■□□□□ 0.12
TMEM222-209ENST00000498220 SHROOM4Q9ULL8 1493 aa15.71■□□□□ 0.11
TMEM222-209ENST00000498220 RB1CC1Q8TDY2 1594 aa15.64■□□□□ 0.09
TMEM222-209ENST00000498220 SCRIBQ14160 1630 aa15.53■□□□□ 0.08
TMEM222-209ENST00000498220 UNC13AQ9UPW8 1703 aa15.27■□□□□ 0.04
TMEM222-209ENST00000498220 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
TMEM222-209ENST00000498220 BICRAQ9NZM4 1560 aa15.13■□□□□ 0.01
TMEM222-209ENST00000498220 RSF1Q96T23 1441 aaPredicted RBP15.06■□□□□ 0
TMEM222-209ENST00000498220 BAZ1AQ9NRL2 1556 aaPredicted RBP15.02■□□□□ -0
TMEM222-209ENST00000498220 CECR2Q9BXF3 1484 aa15.02■□□□□ -0
TMEM222-209ENST00000498220 MROH2BQ7Z745 1585 aa14.97□□□□□ -0.01
TMEM222-209ENST00000498220 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
TMEM222-209ENST00000498220 SMARCA4P51532 1647 aa14.93□□□□□ -0.02
TMEM222-209ENST00000498220 WIZO95785 1651 aa14.84□□□□□ -0.03
TMEM222-209ENST00000498220 PEG3Q9GZU2 1588 aa14.8□□□□□ -0.04
TMEM222-209ENST00000498220 TOP2AP11388 1531 aaKnown RBP14.76□□□□□ -0.05
TMEM222-209ENST00000498220 SMARCA2P51531 1590 aa14.7□□□□□ -0.06
TMEM222-209ENST00000498220 EIF4G1Q04637 1599 aaKnown RBP14.68□□□□□ -0.06
TMEM222-209ENST00000498220 ATAD2BQ9ULI0 1458 aa14.66□□□□□ -0.06
TMEM222-209ENST00000498220 BAZ1BQ9UIG0 1483 aaKnown RBP14.58□□□□□ -0.08
TMEM222-209ENST00000498220 HMGXB3Q12766 1538 aa14.57□□□□□ -0.08
TMEM222-209ENST00000498220 CHIC1Q5VXU3 224 aa14.56□□□□□ -0.08
TMEM222-209ENST00000498220 NCAPD3P42695 1498 aa14.56□□□□□ -0.08
TMEM222-209ENST00000498220 CCDC88BA6NC98 1476 aa14.55□□□□□ -0.08
TMEM222-209ENST00000498220 CC2D2AQ9P2K1 1620 aa14.43□□□□□ -0.1
TMEM222-209ENST00000498220 TRIM41Q8WV44 630 aa14.29□□□□□ -0.12
TMEM222-209ENST00000498220 CFTRP13569 1480 aa14.24□□□□□ -0.13
TMEM222-209ENST00000498220 ABCC8Q09428 1581 aa14.22□□□□□ -0.13
TMEM222-209ENST00000498220 PRDM2Q13029 1718 aa14.2□□□□□ -0.14
TMEM222-209ENST00000498220 WRNQ14191 1432 aaPredicted RBP eCLIP14.18□□□□□ -0.14
TMEM222-209ENST00000498220 CADPSQ9ULU8 1353 aa14.16□□□□□ -0.14
TMEM222-209ENST00000498220 SYNJ1O43426 1573 aa14.1□□□□□ -0.15
TMEM222-209ENST00000498220 TOP2BQ02880 1626 aa14.09□□□□□ -0.15
TMEM222-209ENST00000498220 BIVM-ERCC5R4GMW8 1640 aa14.09□□□□□ -0.15
TMEM222-209ENST00000498220 LAMC3Q9Y6N6 1575 aa14.08□□□□□ -0.16
TMEM222-209ENST00000498220 EEA1Q15075 1411 aa14.07□□□□□ -0.16
TMEM222-209ENST00000498220 CUX1P39880 1505 aa14.01□□□□□ -0.17
TMEM222-209ENST00000498220 FANCD2Q9BXW9 1451 aa13.99□□□□□ -0.17
TMEM222-209ENST00000498220 NESP48681 1621 aa13.96□□□□□ -0.17
TMEM222-209ENST00000498220 SOGA1O94964 1423 aa13.96□□□□□ -0.18
TMEM222-209ENST00000498220 FAM9AQ8IZU1 332 aaPredicted RBP13.95□□□□□ -0.18
TMEM222-209ENST00000498220 PDS5BQ9NTI5 1447 aa13.94□□□□□ -0.18
TMEM222-209ENST00000498220 LOC105371045A0A1W2PR82 267 aa13.93□□□□□ -0.18
TMEM222-209ENST00000498220 CEP164Q9UPV0 1460 aa13.93□□□□□ -0.18
TMEM222-209ENST00000498220 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
TMEM222-209ENST00000498220 DNMBPQ6XZF7 1577 aa13.92□□□□□ -0.18
TMEM222-209ENST00000498220 RUSC2Q8N2Y8 1516 aa13.89□□□□□ -0.19
TMEM222-209ENST00000498220 CSRNP3Q8WYN3 585 aa13.88□□□□□ -0.19
TMEM222-209ENST00000498220 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
TMEM222-209ENST00000498220 KIF21BO75037 1637 aa13.85□□□□□ -0.19
TMEM222-209ENST00000498220 FGD5Q6ZNL6 1462 aa13.85□□□□□ -0.19
TMEM222-209ENST00000498220 KIF21AQ7Z4S6 1674 aa13.84□□□□□ -0.19
TMEM222-209ENST00000498220 KIF27Q86VH2 1401 aa13.83□□□□□ -0.2
TMEM222-209ENST00000498220 GOLGA3Q08378 1498 aa13.83□□□□□ -0.2
TMEM222-209ENST00000498220 URB2Q14146 1524 aaKnown RBP13.81□□□□□ -0.2
TMEM222-209ENST00000498220 POLA1P09884 1462 aaPredicted RBP13.79□□□□□ -0.2
TMEM222-209ENST00000498220 TNIKQ9UKE5 1360 aa13.78□□□□□ -0.2
TMEM222-209ENST00000498220 ERICH3Q5RHP9 1530 aa13.77□□□□□ -0.21
TMEM222-209ENST00000498220 ABCA10Q8WWZ4 1543 aa13.76□□□□□ -0.21
TMEM222-209ENST00000498220 CUX2O14529 1486 aa13.76□□□□□ -0.21
TMEM222-209ENST00000498220 MRC2Q9UBG0 1479 aa13.76□□□□□ -0.21
TMEM222-209ENST00000498220 PRXQ9BXM0 1461 aa13.75□□□□□ -0.21
TMEM222-209ENST00000498220 WDR97A6NE52 1622 aa13.74□□□□□ -0.21
TMEM222-209ENST00000498220 WDR62O43379 1518 aa13.7□□□□□ -0.22
TMEM222-209ENST00000498220 RAPGEF2Q9Y4G8 1499 aa13.7□□□□□ -0.22
TMEM222-209ENST00000498220 RAD54L2Q9Y4B4 1467 aa13.69□□□□□ -0.22
TMEM222-209ENST00000498220 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
TMEM222-209ENST00000498220 CEP162Q5TB80 1403 aa13.68□□□□□ -0.22
TMEM222-209ENST00000498220 UBTFP17480 764 aaKnown RBP13.67□□□□□ -0.22
TMEM222-209ENST00000498220 IGF1RP08069 1367 aa13.67□□□□□ -0.22
TMEM222-209ENST00000498220 ERCC6Q03468 1493 aa13.67□□□□□ -0.22
TMEM222-209ENST00000498220 TARBP1Q13395 1621 aaKnown RBP13.65□□□□□ -0.22
TMEM222-209ENST00000498220 ABCA5Q8WWZ7 1642 aa13.65□□□□□ -0.22
TMEM222-209ENST00000498220 CUL7Q14999 1698 aa13.64□□□□□ -0.23
TMEM222-209ENST00000498220 THOC2Q8NI27 1593 aaKnown RBP13.64□□□□□ -0.23
TMEM222-209ENST00000498220 CARMIL1Q5VZK9 1371 aa13.61□□□□□ -0.23
TMEM222-209ENST00000498220 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
TMEM222-209ENST00000498220 GAPVD1Q14C86 1478 aa13.59□□□□□ -0.23
TMEM222-209ENST00000498220 CLIP1P30622 1438 aa13.56□□□□□ -0.24
TMEM222-209ENST00000498220 TDRD9Q8NDG6 1382 aaKnown RBP13.55□□□□□ -0.24
TMEM222-209ENST00000498220 PBRM1Q86U86 1689 aa13.53□□□□□ -0.24
TMEM222-209ENST00000498220 GRIN2BQ13224 1484 aa13.5□□□□□ -0.25
TMEM222-209ENST00000498220 VPS8Q8N3P4 1428 aa13.48□□□□□ -0.25
TMEM222-209ENST00000498220 ADAMTS12P58397 1594 aa13.48□□□□□ -0.25
TMEM222-209ENST00000498220 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
TMEM222-209ENST00000498220 CTTNBP2Q8WZ74 1663 aa13.47□□□□□ -0.25
TMEM222-209ENST00000498220 EIF4G3O43432 1585 aaKnown RBP13.46□□□□□ -0.25
TMEM222-209ENST00000498220 AQRO60306 1485 aaKnown RBP eCLIP13.46□□□□□ -0.251e-6■■■■□ 23.2
TMEM222-209ENST00000498220 ZNF608Q9ULD9 1512 aaPredicted RBP13.45□□□□□ -0.26
TMEM222-209ENST00000498220 ARAP1Q96P48 1450 aa13.44□□□□□ -0.26
TMEM222-209ENST00000498220 ARHGAP35Q9NRY4 1499 aa13.43□□□□□ -0.26
TMEM222-209ENST00000498220 EFCAB5A4FU69 1503 aa13.43□□□□□ -0.26
TMEM222-209ENST00000498220 TRIM26Q12899 539 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms