RNA–Protein interactions for RNA: ENST00000497802.1

PLXNA3-209, Transcript of plexin A3, humanhuman

TSL 2

Gene PLXNA3, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-209ENST00000497802 NISCHQ9Y2I1 1504 aa36.26■■■■□ 3.4
PLXNA3-209ENST00000497802 CCDC180Q9P1Z9 1646 aa32.31■■■□□ 2.76
PLXNA3-209ENST00000497802 ABCC9O60706 1549 aa32.29■■■□□ 2.76
PLXNA3-209ENST00000497802 RB1CC1Q8TDY2 1594 aa30.67■■■□□ 2.5
PLXNA3-209ENST00000497802 DCAF8L2P0C7V8 631 aa30.64■■■□□ 2.5
PLXNA3-209ENST00000497802 NACADO15069 1562 aa30.5■■■□□ 2.47
PLXNA3-209ENST00000497802 PABPN1Q86U42 306 aaKnown RBP eCLIP30.17■■■□□ 2.423e-6■■■■□ 24.5
PLXNA3-209ENST00000497802 DNAJC5BQ9UF47 199 aa30.14■■■□□ 2.42
PLXNA3-209ENST00000497802 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
PLXNA3-209ENST00000497802 MYO15BQ96JP2 1530 aa30.1■■■□□ 2.41
PLXNA3-209ENST00000497802 UNC13AQ9UPW8 1703 aa30.05■■■□□ 2.4
PLXNA3-209ENST00000497802 BICRAQ9NZM4 1560 aa29.88■■■□□ 2.37
PLXNA3-209ENST00000497802 DCAF1Q9Y4B6 1507 aa29.85■■■□□ 2.37
PLXNA3-209ENST00000497802 SCRIBQ14160 1630 aa29.65■■■□□ 2.34
PLXNA3-209ENST00000497802 SHROOM4Q9ULL8 1493 aa29.27■■■□□ 2.28
PLXNA3-209ENST00000497802 CC2D2AQ9P2K1 1620 aa29.1■■■□□ 2.25
PLXNA3-209ENST00000497802 EIF4G1Q04637 1599 aaKnown RBP29.09■■■□□ 2.25
PLXNA3-209ENST00000497802 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
PLXNA3-209ENST00000497802 SMARCA4P51532 1647 aa28.23■■■□□ 2.11
PLXNA3-209ENST00000497802 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
PLXNA3-209ENST00000497802 NCAPD3P42695 1498 aa28.2■■■□□ 2.1
PLXNA3-209ENST00000497802 BAZ1AQ9NRL2 1556 aaPredicted RBP28.07■■■□□ 2.08
PLXNA3-209ENST00000497802 SMARCA2P51531 1590 aa28.05■■■□□ 2.08
PLXNA3-209ENST00000497802 MROH2BQ7Z745 1585 aa28.03■■■□□ 2.08
PLXNA3-209ENST00000497802 HMGXB3Q12766 1538 aa27.98■■■□□ 2.07
PLXNA3-209ENST00000497802 BAZ1BQ9UIG0 1483 aaKnown RBP27.93■■■□□ 2.06
PLXNA3-209ENST00000497802 PEG3Q9GZU2 1588 aa27.88■■■□□ 2.05
PLXNA3-209ENST00000497802 NESP48681 1621 aa27.84■■■□□ 2.05
PLXNA3-209ENST00000497802 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
PLXNA3-209ENST00000497802 WIZO95785 1651 aa27.7■■■□□ 2.02
PLXNA3-209ENST00000497802 CUX2O14529 1486 aa27.54■■■□□ 2
PLXNA3-209ENST00000497802 RSF1Q96T23 1441 aaPredicted RBP27.51■■□□□ 1.99
PLXNA3-209ENST00000497802 LAMC3Q9Y6N6 1575 aa27.48■■□□□ 1.99
PLXNA3-209ENST00000497802 KIF21AQ7Z4S6 1674 aa27.4■■□□□ 1.98
PLXNA3-209ENST00000497802 THOC2Q8NI27 1593 aaKnown RBP27.39■■□□□ 1.98
PLXNA3-209ENST00000497802 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
PLXNA3-209ENST00000497802 PDS5BQ9NTI5 1447 aa27.33■■□□□ 1.97
PLXNA3-209ENST00000497802 DNAJC5Q9H3Z4 198 aa27.33■■□□□ 1.97
PLXNA3-209ENST00000497802 TOP2AP11388 1531 aaKnown RBP27.29■■□□□ 1.96
PLXNA3-209ENST00000497802 MRC2Q9UBG0 1479 aa27.13■■□□□ 1.93
PLXNA3-209ENST00000497802 CFTRP13569 1480 aa27.13■■□□□ 1.93
PLXNA3-209ENST00000497802 FANCD2Q9BXW9 1451 aa27.1■■□□□ 1.93
PLXNA3-209ENST00000497802 CEP164Q9UPV0 1460 aa27.07■■□□□ 1.92
PLXNA3-209ENST00000497802 WDR62O43379 1518 aa27.05■■□□□ 1.92
PLXNA3-209ENST00000497802 CCDC88BA6NC98 1476 aa27.04■■□□□ 1.92
PLXNA3-209ENST00000497802 URB2Q14146 1524 aaKnown RBP26.91■■□□□ 1.9
PLXNA3-209ENST00000497802 PRDM2Q13029 1718 aa26.79■■□□□ 1.88
PLXNA3-209ENST00000497802 TOPBP1Q92547 1522 aa26.62■■□□□ 1.85
PLXNA3-209ENST00000497802 SUPT5HO00267 1087 aaKnown RBP26.6■■□□□ 1.85
PLXNA3-209ENST00000497802 ZNF608Q9ULD9 1512 aaPredicted RBP26.58■■□□□ 1.85
PLXNA3-209ENST00000497802 IFT140Q96RY7 1462 aa26.51■■□□□ 1.83
PLXNA3-209ENST00000497802 DNMBPQ6XZF7 1577 aa26.5■■□□□ 1.83
PLXNA3-209ENST00000497802 ABCC8Q09428 1581 aa26.43■■□□□ 1.82
PLXNA3-209ENST00000497802 OSCARQ8IYS5 282 aa26.39■■□□□ 1.82
PLXNA3-209ENST00000497802 POLA1P09884 1462 aaPredicted RBP26.37■■□□□ 1.81
PLXNA3-209ENST00000497802 TARBP1Q13395 1621 aaKnown RBP26.36■■□□□ 1.81
PLXNA3-209ENST00000497802 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
PLXNA3-209ENST00000497802 EIF4G3O43432 1585 aaKnown RBP26.36■■□□□ 1.81
PLXNA3-209ENST00000497802 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.815e-13■■■■■ 39
PLXNA3-209ENST00000497802 RAD54L2Q9Y4B4 1467 aa26.36■■□□□ 1.81
PLXNA3-209ENST00000497802 CUX1P39880 1505 aa26.29■■□□□ 1.8
PLXNA3-209ENST00000497802 FGD5Q6ZNL6 1462 aa26.27■■□□□ 1.8
PLXNA3-209ENST00000497802 SOGA1O94964 1423 aa26.25■■□□□ 1.79
PLXNA3-209ENST00000497802 TDRD9Q8NDG6 1382 aaKnown RBP26.24■■□□□ 1.79
PLXNA3-209ENST00000497802 FBLN2P98095 1184 aa26.14■■□□□ 1.78
PLXNA3-209ENST00000497802 CHD1O14646 1710 aa26.11■■□□□ 1.77
PLXNA3-209ENST00000497802 RIMBP3CA6NJZ7 1639 aa26.06■■□□□ 1.76
PLXNA3-209ENST00000497802 RIMBP3BA6NNM3 1639 aa26.06■■□□□ 1.76
PLXNA3-209ENST00000497802 RIMBP3Q9UFD9 1639 aa26.06■■□□□ 1.76
PLXNA3-209ENST00000497802 SNAPC4Q5SXM2 1469 aa26.06■■□□□ 1.76
PLXNA3-209ENST00000497802 WDR97A6NE52 1622 aa26.01■■□□□ 1.75
PLXNA3-209ENST00000497802 ARHGEF11O15085 1522 aa26■■□□□ 1.75
PLXNA3-209ENST00000497802 GRIN2BQ13224 1484 aa25.96■■□□□ 1.75
PLXNA3-209ENST00000497802 SYNJ1O43426 1573 aa25.95■■□□□ 1.74
PLXNA3-209ENST00000497802 GAPVD1Q14C86 1478 aa25.92■■□□□ 1.74
PLXNA3-209ENST00000497802 ABCA10Q8WWZ4 1543 aa25.92■■□□□ 1.74
PLXNA3-209ENST00000497802 WRNQ14191 1432 aaPredicted RBP eCLIP25.91■■□□□ 1.74
PLXNA3-209ENST00000497802 CHMP7Q8WUX9 453 aaPredicted RBP25.91■■□□□ 1.74
PLXNA3-209ENST00000497802 MAGI1Q96QZ7 1491 aaPredicted RBP25.89■■□□□ 1.73
PLXNA3-209ENST00000497802 PBRM1Q86U86 1689 aa25.88■■□□□ 1.73
PLXNA3-209ENST00000497802 ABCA5Q8WWZ7 1642 aa25.88■■□□□ 1.73
PLXNA3-209ENST00000497802 TOP2BQ02880 1626 aa25.87■■□□□ 1.73
PLXNA3-209ENST00000497802 BIVM-ERCC5R4GMW8 1640 aa25.86■■□□□ 1.73
PLXNA3-209ENST00000497802 CYB5RLQ6IPT4 315 aa25.85■■□□□ 1.73
PLXNA3-209ENST00000497802 SYNJ2O15056 1496 aa25.84■■□□□ 1.73
PLXNA3-209ENST00000497802 CLASP1Q7Z460 1538 aa25.81■■□□□ 1.72
PLXNA3-209ENST00000497802 ARAP1Q96P48 1450 aa25.8■■□□□ 1.72
PLXNA3-209ENST00000497802 ADAMTS12P58397 1594 aa25.67■■□□□ 1.7
PLXNA3-209ENST00000497802 GRIN2AQ12879 1464 aa25.65■■□□□ 1.7
PLXNA3-209ENST00000497802 CEP170Q5SW79 1584 aa25.59■■□□□ 1.69
PLXNA3-209ENST00000497802 FHAD1B1AJZ9 1412 aa25.58■■□□□ 1.69
PLXNA3-209ENST00000497802 ERICH3Q5RHP9 1530 aa25.56■■□□□ 1.68
PLXNA3-209ENST00000497802 ERCC6L2Q5T890 1561 aa25.56■■□□□ 1.68
PLXNA3-209ENST00000497802 NUP160Q12769 1436 aa25.54■■□□□ 1.68
PLXNA3-209ENST00000497802 TRHP20396 242 aaPredicted RBP25.47■■□□□ 1.67
PLXNA3-209ENST00000497802 IGF1RP08069 1367 aa25.39■■□□□ 1.65
PLXNA3-209ENST00000497802 SHROOM2Q13796 1616 aa25.37■■□□□ 1.65
PLXNA3-209ENST00000497802 KIF27Q86VH2 1401 aa25.37■■□□□ 1.65
PLXNA3-209ENST00000497802 PRG4Q92954 1404 aaPredicted RBP25.31■■□□□ 1.64
PLXNA3-209ENST00000497802 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms