RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 PABPN1Q86U42 306 aaKnown RBP eCLIP14.69□□□□□ -0.06
TRAPPC12-223ENST00000497597 FANCIQ9NVI1 1328 aa14.69□□□□□ -0.06
TRAPPC12-223ENST00000497597 POLR3GLQ9BT43 218 aa14.68□□□□□ -0.06
TRAPPC12-223ENST00000497597 MYT1LQ9UL68 1186 aa14.68□□□□□ -0.06
TRAPPC12-223ENST00000497597 SMARCA4P51532 1647 aa14.67□□□□□ -0.06
TRAPPC12-223ENST00000497597 CC2D2AQ9P2K1 1620 aa14.67□□□□□ -0.06
TRAPPC12-223ENST00000497597 ANP32AP39687 249 aaKnown RBP14.67□□□□□ -0.06
TRAPPC12-223ENST00000497597 LAS1LQ9Y4W2 734 aaKnown RBP14.66□□□□□ -0.06
TRAPPC12-223ENST00000497597 ZBTB47Q9UFB7 747 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC12-223ENST00000497597 WIZO95785 1651 aa14.64□□□□□ -0.07
TRAPPC12-223ENST00000497597 BAZ1AQ9NRL2 1556 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC12-223ENST00000497597 BAZ1BQ9UIG0 1483 aaKnown RBP14.62□□□□□ -0.07
TRAPPC12-223ENST00000497597 PPP4R2Q9NY27 417 aa14.61□□□□□ -0.07
TRAPPC12-223ENST00000497597 VPS8Q8N3P4 1428 aa14.6□□□□□ -0.07
TRAPPC12-223ENST00000497597 HMGXB3Q12766 1538 aa14.54□□□□□ -0.08
TRAPPC12-223ENST00000497597 CCER2I3L3R5 266 aa14.54□□□□□ -0.08
TRAPPC12-223ENST00000497597 P3H3Q8IVL6 736 aa14.53□□□□□ -0.08
TRAPPC12-223ENST00000497597 PPP1R15AO75807 674 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC12-223ENST00000497597 NEFMP07197 916 aa14.52□□□□□ -0.08
TRAPPC12-223ENST00000497597 RAB3GAP2Q9H2M9 1393 aa14.52□□□□□ -0.09
TRAPPC12-223ENST00000497597 MRS2Q9HD23 443 aa14.52□□□□□ -0.09
TRAPPC12-223ENST00000497597 EEA1Q15075 1411 aa14.51□□□□□ -0.09
TRAPPC12-223ENST00000497597 SMARCA2P51531 1590 aa14.5□□□□□ -0.09
TRAPPC12-223ENST00000497597 TONSLQ96HA7 1378 aa14.49□□□□□ -0.09
TRAPPC12-223ENST00000497597 CEP164Q9UPV0 1460 aa14.49□□□□□ -0.09
TRAPPC12-223ENST00000497597 NCAPD3P42695 1498 aa14.49□□□□□ -0.09
TRAPPC12-223ENST00000497597 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
TRAPPC12-223ENST00000497597 CCNB3Q8WWL7 1395 aa14.47□□□□□ -0.09
TRAPPC12-223ENST00000497597 ATAD2BQ9ULI0 1458 aa14.45□□□□□ -0.1
TRAPPC12-223ENST00000497597 RAPGEF2Q9Y4G8 1499 aa14.45□□□□□ -0.1
TRAPPC12-223ENST00000497597 TIMELESSQ9UNS1 1208 aa14.44□□□□□ -0.1
TRAPPC12-223ENST00000497597 CCDC184Q52MB2 194 aa14.44□□□□□ -0.1
TRAPPC12-223ENST00000497597 IPO9Q96P70 1041 aaKnown RBP14.43□□□□□ -0.1
TRAPPC12-223ENST00000497597 DAXXQ9UER7 740 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC12-223ENST00000497597 BRPF3Q9ULD4 1205 aa14.43□□□□□ -0.1
TRAPPC12-223ENST00000497597 ARXQ96QS3 562 aa14.41□□□□□ -0.1
TRAPPC12-223ENST00000497597 ERICH6BQ5W0A0 696 aa14.4□□□□□ -0.1
TRAPPC12-223ENST00000497597 WDR97A6NE52 1622 aa14.4□□□□□ -0.1
TRAPPC12-223ENST00000497597 ZNF326Q5BKZ1 582 aaKnown RBP14.34□□□□□ -0.11
TRAPPC12-223ENST00000497597 SLC4A3P48751 1232 aa14.33□□□□□ -0.12
TRAPPC12-223ENST00000497597 UBE2Q2Q8WVN8 375 aa14.33□□□□□ -0.12
TRAPPC12-223ENST00000497597 SETD5Q9C0A6 1442 aa14.32□□□□□ -0.12
TRAPPC12-223ENST00000497597 HSPA5P11021 654 aaKnown RBP14.31□□□□□ -0.12
TRAPPC12-223ENST00000497597 KIF21BO75037 1637 aa14.31□□□□□ -0.12
TRAPPC12-223ENST00000497597 TOP2AP11388 1531 aaKnown RBP14.29□□□□□ -0.12
TRAPPC12-223ENST00000497597 CHIC2Q9UKJ5 165 aa14.29□□□□□ -0.12
TRAPPC12-223ENST00000497597 SKAP1Q86WV1 359 aa14.26□□□□□ -0.13
TRAPPC12-223ENST00000497597 EIF4G2P78344 907 aaKnown RBP eCLIP14.26□□□□□ -0.132e-9■■■□□ 17.1
TRAPPC12-223ENST00000497597 AKNAQ7Z591 1439 aa14.24□□□□□ -0.13
TRAPPC12-223ENST00000497597 PRDM2Q13029 1718 aa14.23□□□□□ -0.13
TRAPPC12-223ENST00000497597 RRP7BPQ9NSQ0 103 aa14.22□□□□□ -0.13
TRAPPC12-223ENST00000497597 MAPKBP1O60336 1514 aa14.22□□□□□ -0.13
TRAPPC12-223ENST00000497597 WASHC2AQ641Q2 1341 aa14.21□□□□□ -0.13
TRAPPC12-223ENST00000497597 PPM1GO15355 546 aaPredicted RBP14.21□□□□□ -0.14
TRAPPC12-223ENST00000497597 FOXD1Q16676 465 aa14.21□□□□□ -0.14
TRAPPC12-223ENST00000497597 PRKRIP1Q9H875 184 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC12-223ENST00000497597 ARID3CA6NKF2 412 aa14.19□□□□□ -0.14
TRAPPC12-223ENST00000497597 TMC1Q8TDI8 760 aa14.18□□□□□ -0.14
TRAPPC12-223ENST00000497597 PKNOX2Q96KN3 472 aa14.18□□□□□ -0.14
TRAPPC12-223ENST00000497597 PDE4AP27815 886 aa14.18□□□□□ -0.14
TRAPPC12-223ENST00000497597 ARAP1Q96P48 1450 aa14.17□□□□□ -0.14
TRAPPC12-223ENST00000497597 ARID4BQ4LE39 1312 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC12-223ENST00000497597 RRBP1Q9P2E9 1410 aaKnown RBP14.17□□□□□ -0.14
TRAPPC12-223ENST00000497597 EXOC6Q8TAG9 804 aa14.17□□□□□ -0.14
TRAPPC12-223ENST00000497597 GSE1Q14687 1217 aa14.16□□□□□ -0.14
TRAPPC12-223ENST00000497597 FRAT1Q92837 279 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC12-223ENST00000497597 ZBED9Q6R2W3 1325 aa14.16□□□□□ -0.14
TRAPPC12-223ENST00000497597 NUDCQ9Y266 331 aa14.14□□□□□ -0.15
TRAPPC12-223ENST00000497597 LAMC3Q9Y6N6 1575 aa14.14□□□□□ -0.15
TRAPPC12-223ENST00000497597 VSIG10Q8N0Z9 540 aa14.13□□□□□ -0.15
TRAPPC12-223ENST00000497597 PHLDB1Q86UU1 1377 aa14.12□□□□□ -0.15
TRAPPC12-223ENST00000497597 C11orf95C9JLR9 678 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC12-223ENST00000497597 NFKBIBQ15653 356 aa14.11□□□□□ -0.15
TRAPPC12-223ENST00000497597 PLIN1O60240 522 aa14.11□□□□□ -0.15
TRAPPC12-223ENST00000497597 NAP1L5Q96NT1 182 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC12-223ENST00000497597 SYNJ1O43426 1573 aa14.1□□□□□ -0.15
TRAPPC12-223ENST00000497597 RGS3P49796 1198 aa14.09□□□□□ -0.15
TRAPPC12-223ENST00000497597 USP35Q9P2H5 1018 aa14.07□□□□□ -0.16
TRAPPC12-223ENST00000497597 GLIPR1L2Q4G1C9 344 aa14.07□□□□□ -0.16
TRAPPC12-223ENST00000497597 TCERG1O14776 1098 aaKnown RBP14.06□□□□□ -0.16
TRAPPC12-223ENST00000497597 L3MBTL2Q969R5 705 aa14.06□□□□□ -0.16
TRAPPC12-223ENST00000497597 DDRGK1Q96HY6 314 aa14.05□□□□□ -0.16
TRAPPC12-223ENST00000497597 FRAT2O75474 233 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC12-223ENST00000497597 RCAN3Q9UKA8 241 aa14.01□□□□□ -0.17
TRAPPC12-223ENST00000497597 SLKQ9H2G2 1235 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC12-223ENST00000497597 PLEKHG5O94827 1062 aa14□□□□□ -0.17
TRAPPC12-223ENST00000497597 BACH2Q9BYV9 841 aa14□□□□□ -0.17
TRAPPC12-223ENST00000497597 CFTRP13569 1480 aa14□□□□□ -0.17
TRAPPC12-223ENST00000497597 DCAF11Q8TEB1 546 aa14□□□□□ -0.17
TRAPPC12-223ENST00000497597 RSPH6AQ9H0K4 717 aa13.99□□□□□ -0.17
TRAPPC12-223ENST00000497597 GZF1Q9H116 711 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC12-223ENST00000497597 KIF21AQ7Z4S6 1674 aa13.99□□□□□ -0.17
TRAPPC12-223ENST00000497597 RRP1P56182 461 aaKnown RBP13.99□□□□□ -0.17
TRAPPC12-223ENST00000497597 MTUS2Q5JR59 1369 aa13.98□□□□□ -0.17
TRAPPC12-223ENST00000497597 THOC2Q8NI27 1593 aaKnown RBP13.98□□□□□ -0.17
TRAPPC12-223ENST00000497597 SPRYD3Q8NCJ5 442 aa13.98□□□□□ -0.17
TRAPPC12-223ENST00000497597 WASHC2CQ9Y4E1 1318 aa13.98□□□□□ -0.17
TRAPPC12-223ENST00000497597 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
TRAPPC12-223ENST00000497597 ZMYND15Q9H091 742 aa13.97□□□□□ -0.17
TRAPPC12-223ENST00000497597 KIF7Q2M1P5 1343 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms