RNA–Protein interactions for RNA: ENST00000497363.1

LAMA5-214, Transcript of laminin subunit alpha 5, humanhuman

TSL 3

Gene LAMA5, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-214ENST00000497363 XRCC6P12956 609 aaKnown RBP eCLIP18.44■□□□□ 0.549e-13■■■■■ 52.6
LAMA5-214ENST00000497363 PCBP2Q15366 365 aaKnown RBP eCLIP15.48■□□□□ 0.071e-323■■■■■ 43.5
LAMA5-214ENST00000497363 PCBP1Q15365 356 aaKnown RBP eCLIP18.36■□□□□ 0.533e-29■■■■■ 37.6
LAMA5-214ENST00000497363 AQRO60306 1485 aaKnown RBP eCLIP29.48■■■□□ 2.313e-7■■■■■ 30.5
LAMA5-214ENST00000497363 SF3B1O75533 1304 aaKnown RBP eCLIP18.09■□□□□ 0.492e-6■■■■□ 26.7
LAMA5-214ENST00000497363 SF3A3Q12874 501 aaKnown RBP eCLIP14.52□□□□□ -0.091e-44■■■■□ 26.5
LAMA5-214ENST00000497363 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.99■□□□□ 0.795e-24■■■■□ 25.9
LAMA5-214ENST00000497363 HNRNPKP61978 463 aaKnown RBP eCLIP16.63■□□□□ 0.254e-73■■■■□ 24.8
LAMA5-214ENST00000497363 IGF2BP3O00425 579 aaKnown RBP eCLIP20.3■□□□□ 0.841e-7■■■■□ 23.3
LAMA5-214ENST00000497363 SF3B4Q15427 424 aaKnown RBP eCLIP14.98□□□□□ -0.015e-13■■■■□ 21.3
LAMA5-214ENST00000497363 PPIGQ13427 754 aaKnown RBP eCLIP19.03■□□□□ 0.647e-20■■■□□ 15.3
LAMA5-214ENST00000497363 EFTUD2Q15029 972 aaKnown RBP eCLIP15.61■□□□□ 0.091e-8■■■□□ 15.2
LAMA5-214ENST00000497363 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.04■□□□□ 0.642e-17■■■□□ 15
LAMA5-214ENST00000497363 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.89□□□□□ -0.033e-50■■□□□ 13.5
LAMA5-214ENST00000497363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.45■■□□□ 1.661e-15■■□□□ 12.9
LAMA5-214ENST00000497363 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.14□□□□□ -0.156e-87■■□□□ 12.7
LAMA5-214ENST00000497363 RBFOX2O43251 390 aaKnown RBP eCLIP12.65□□□□□ -0.381e-7■■□□□ 12
LAMA5-214ENST00000497363 CDC40O60508 579 aaKnown RBP eCLIP15.22■□□□□ 0.031e-8■□□□□ 10.6
LAMA5-214ENST00000497363 HNRNPCP07910 306 aaKnown RBP eCLIP12.14□□□□□ -0.471e-6■□□□□ 10.4
LAMA5-214ENST00000497363 RBM22Q9NW64 420 aaKnown RBP eCLIP16.58■□□□□ 0.243e-52■□□□□ 9.1
LAMA5-214ENST00000497363 SND1Q7KZF4 910 aaKnown RBP eCLIP17.02■□□□□ 0.324e-10■□□□□ 8.5
LAMA5-214ENST00000497363 U2AF2P26368 475 aaKnown RBP eCLIP18.48■□□□□ 0.552e-10■□□□□ 8.4
Retrieved 22 of 22 RNA–protein pairs in 15.8 ms