RNA–Protein interactions for RNA: ENST00000496509.2

NINL-207, Transcript of ninein like, humanhuman

TSL 5

Gene NINL, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINL-207ENST00000496509 NISCHQ9Y2I1 1504 aa32.5■■■□□ 2.79
NINL-207ENST00000496509 CCDC180Q9P1Z9 1646 aa28.93■■■□□ 2.22
NINL-207ENST00000496509 AEBP2Q6ZN18 517 aaPredicted RBP28.46■■■□□ 2.15
NINL-207ENST00000496509 ABCC9O60706 1549 aa28.37■■■□□ 2.13
NINL-207ENST00000496509 RB1CC1Q8TDY2 1594 aa27.26■■□□□ 1.96
NINL-207ENST00000496509 NACADO15069 1562 aa27.22■■□□□ 1.95
NINL-207ENST00000496509 DCAF8L2P0C7V8 631 aa27.17■■□□□ 1.94
NINL-207ENST00000496509 ZCCHC6Q5VYS8 1495 aaKnown RBP27.06■■□□□ 1.92
NINL-207ENST00000496509 MYO15BQ96JP2 1530 aa27.02■■□□□ 1.92
NINL-207ENST00000496509 DCAF1Q9Y4B6 1507 aa26.88■■□□□ 1.89
NINL-207ENST00000496509 UNC13AQ9UPW8 1703 aa26.65■■□□□ 1.86
NINL-207ENST00000496509 CHIC1Q5VXU3 224 aa26.49■■□□□ 1.83
NINL-207ENST00000496509 PABPN1Q86U42 306 aaKnown RBP eCLIP26.49■■□□□ 1.83
NINL-207ENST00000496509 BICRAQ9NZM4 1560 aa26.45■■□□□ 1.82
NINL-207ENST00000496509 SCRIBQ14160 1630 aa26.39■■□□□ 1.82
NINL-207ENST00000496509 SHROOM4Q9ULL8 1493 aa26.15■■□□□ 1.78
NINL-207ENST00000496509 DNAJC5BQ9UF47 199 aa26.09■■□□□ 1.77
NINL-207ENST00000496509 EIF4G1Q04637 1599 aaKnown RBP25.75■■□□□ 1.71
NINL-207ENST00000496509 CC2D2AQ9P2K1 1620 aa25.66■■□□□ 1.7
NINL-207ENST00000496509 CECR2Q9BXF3 1484 aa25.5■■□□□ 1.67
NINL-207ENST00000496509 SMARCA4P51532 1647 aa25.23■■□□□ 1.63
NINL-207ENST00000496509 BAZ1AQ9NRL2 1556 aaPredicted RBP25.19■■□□□ 1.62
NINL-207ENST00000496509 ATAD2BQ9ULI0 1458 aa25.11■■□□□ 1.61
NINL-207ENST00000496509 NCAPD3P42695 1498 aa25.1■■□□□ 1.61
NINL-207ENST00000496509 SMARCA2P51531 1590 aa25.08■■□□□ 1.61
NINL-207ENST00000496509 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
NINL-207ENST00000496509 PEG3Q9GZU2 1588 aa24.98■■□□□ 1.59
NINL-207ENST00000496509 HMGXB3Q12766 1538 aa24.98■■□□□ 1.59
NINL-207ENST00000496509 BAZ1BQ9UIG0 1483 aaKnown RBP24.9■■□□□ 1.58
NINL-207ENST00000496509 WIZO95785 1651 aa24.78■■□□□ 1.56
NINL-207ENST00000496509 RSF1Q96T23 1441 aaPredicted RBP24.73■■□□□ 1.55
NINL-207ENST00000496509 NESP48681 1621 aa24.53■■□□□ 1.52
NINL-207ENST00000496509 TOP2AP11388 1531 aaKnown RBP24.51■■□□□ 1.51
NINL-207ENST00000496509 LAMC3Q9Y6N6 1575 aa24.46■■□□□ 1.51
NINL-207ENST00000496509 ERCC6Q03468 1493 aa24.46■■□□□ 1.51
NINL-207ENST00000496509 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
NINL-207ENST00000496509 PDS5BQ9NTI5 1447 aa24.29■■□□□ 1.48
NINL-207ENST00000496509 KIF21AQ7Z4S6 1674 aa24.24■■□□□ 1.47
NINL-207ENST00000496509 CUX2O14529 1486 aa24.22■■□□□ 1.47
NINL-207ENST00000496509 CCDC88BA6NC98 1476 aa24.21■■□□□ 1.47
NINL-207ENST00000496509 CFTRP13569 1480 aa24.21■■□□□ 1.47
NINL-207ENST00000496509 THOC2Q8NI27 1593 aaKnown RBP24.18■■□□□ 1.46
NINL-207ENST00000496509 SENP3Q9H4L4 574 aaPredicted RBP24.16■■□□□ 1.46
NINL-207ENST00000496509 FANCD2Q9BXW9 1451 aa24.09■■□□□ 1.45
NINL-207ENST00000496509 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
NINL-207ENST00000496509 SUPT5HO00267 1087 aaKnown RBP24.05■■□□□ 1.44
NINL-207ENST00000496509 MRC2Q9UBG0 1479 aa24.05■■□□□ 1.44
NINL-207ENST00000496509 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
NINL-207ENST00000496509 WDR62O43379 1518 aa23.98■■□□□ 1.43
NINL-207ENST00000496509 PHF23Q9BUL5 403 aaPredicted RBP23.87■■□□□ 1.41
NINL-207ENST00000496509 URB2Q14146 1524 aaKnown RBP23.86■■□□□ 1.41
NINL-207ENST00000496509 TOPBP1Q92547 1522 aa23.7■■□□□ 1.38
NINL-207ENST00000496509 ABCC8Q09428 1581 aa23.69■■□□□ 1.38
NINL-207ENST00000496509 DNMBPQ6XZF7 1577 aa23.67■■□□□ 1.38
NINL-207ENST00000496509 IFT140Q96RY7 1462 aa23.56■■□□□ 1.36
NINL-207ENST00000496509 DNAJC5Q9H3Z4 198 aa23.56■■□□□ 1.36
NINL-207ENST00000496509 CUX1P39880 1505 aa23.5■■□□□ 1.35
NINL-207ENST00000496509 POLA1P09884 1462 aaPredicted RBP23.49■■□□□ 1.35
NINL-207ENST00000496509 ZNF608Q9ULD9 1512 aaPredicted RBP23.47■■□□□ 1.35
NINL-207ENST00000496509 TARBP1Q13395 1621 aaKnown RBP23.45■■□□□ 1.34
NINL-207ENST00000496509 FGD5Q6ZNL6 1462 aa23.43■■□□□ 1.34
NINL-207ENST00000496509 SOGA1O94964 1423 aa23.4■■□□□ 1.34
NINL-207ENST00000496509 RAD54L2Q9Y4B4 1467 aa23.39■■□□□ 1.34
NINL-207ENST00000496509 EIF4G3O43432 1585 aaKnown RBP23.39■■□□□ 1.33
NINL-207ENST00000496509 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.32
NINL-207ENST00000496509 AQRO60306 1485 aaKnown RBP eCLIP23.32■■□□□ 1.322e-9■■■■□ 19.7
NINL-207ENST00000496509 TOP2BQ02880 1626 aa23.29■■□□□ 1.32
NINL-207ENST00000496509 BIVM-ERCC5R4GMW8 1640 aa23.28■■□□□ 1.32
NINL-207ENST00000496509 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.32
NINL-207ENST00000496509 SYNJ1O43426 1573 aa23.27■■□□□ 1.32
NINL-207ENST00000496509 WDR97A6NE52 1622 aa23.26■■□□□ 1.31
NINL-207ENST00000496509 OSCARQ8IYS5 282 aa23.2■■□□□ 1.3
NINL-207ENST00000496509 ABCA10Q8WWZ4 1543 aa23.19■■□□□ 1.3
NINL-207ENST00000496509 GRIN2BQ13224 1484 aa23.13■■□□□ 1.29
NINL-207ENST00000496509 GAPVD1Q14C86 1478 aa23.13■■□□□ 1.29
NINL-207ENST00000496509 ABCA5Q8WWZ7 1642 aa23.12■■□□□ 1.29
NINL-207ENST00000496509 SNAPC4Q5SXM2 1469 aa23.11■■□□□ 1.29
NINL-207ENST00000496509 CHD1O14646 1710 aa23.11■■□□□ 1.29
NINL-207ENST00000496509 PBRM1Q86U86 1689 aa23.09■■□□□ 1.29
NINL-207ENST00000496509 MAGI1Q96QZ7 1491 aaPredicted RBP23.09■■□□□ 1.29
NINL-207ENST00000496509 FBLN2P98095 1184 aa23.06■■□□□ 1.28
NINL-207ENST00000496509 SYNJ2O15056 1496 aa22.99■■□□□ 1.27
NINL-207ENST00000496509 CHMP7Q8WUX9 453 aaPredicted RBP22.99■■□□□ 1.27
NINL-207ENST00000496509 ERICH3Q5RHP9 1530 aa22.92■■□□□ 1.26
NINL-207ENST00000496509 ADAMTS12P58397 1594 aa22.9■■□□□ 1.26
NINL-207ENST00000496509 FHAD1B1AJZ9 1412 aa22.85■■□□□ 1.25
NINL-207ENST00000496509 CLASP1Q7Z460 1538 aa22.85■■□□□ 1.25
NINL-207ENST00000496509 RIMBP3CA6NJZ7 1639 aa22.85■■□□□ 1.25
NINL-207ENST00000496509 RIMBP3BA6NNM3 1639 aa22.85■■□□□ 1.25
NINL-207ENST00000496509 RIMBP3Q9UFD9 1639 aa22.85■■□□□ 1.25
NINL-207ENST00000496509 KIF27Q86VH2 1401 aa22.84■■□□□ 1.25
NINL-207ENST00000496509 GRIN2AQ12879 1464 aa22.84■■□□□ 1.25
NINL-207ENST00000496509 ARHGEF11O15085 1522 aa22.83■■□□□ 1.25
NINL-207ENST00000496509 TRIM41Q8WV44 630 aa22.76■■□□□ 1.23
NINL-207ENST00000496509 IGF1RP08069 1367 aa22.75■■□□□ 1.23
NINL-207ENST00000496509 NUP160Q12769 1436 aa22.74■■□□□ 1.23
NINL-207ENST00000496509 CEP170Q5SW79 1584 aa22.73■■□□□ 1.23
NINL-207ENST00000496509 CUL7Q14999 1698 aa22.71■■□□□ 1.23
NINL-207ENST00000496509 FOXD1Q16676 465 aa22.7■■□□□ 1.22
NINL-207ENST00000496509 ARAP1Q96P48 1450 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms