RNA–Protein interactions for RNA: ENST00000496485.1

CBS-217, Transcript of cystathionine-beta-synthase, humanhuman

TSL 2

Gene CBS, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBS-217ENST00000496485 NISCHQ9Y2I1 1504 aa47.22■■■■■ 5.15
CBS-217ENST00000496485 ABCC9O60706 1549 aa42.49■■■■■ 4.39
CBS-217ENST00000496485 CCDC180Q9P1Z9 1646 aa42.42■■■■■ 4.38
CBS-217ENST00000496485 RB1CC1Q8TDY2 1594 aa40.44■■■■■ 4.06
CBS-217ENST00000496485 NACADO15069 1562 aa40.14■■■■■ 4.02
CBS-217ENST00000496485 DCAF8L2P0C7V8 631 aa39.91■■■■□ 3.98
CBS-217ENST00000496485 DNAJC5BQ9UF47 199 aa39.88■■■■□ 3.97
CBS-217ENST00000496485 MYO15BQ96JP2 1530 aa39.58■■■■□ 3.93
CBS-217ENST00000496485 PABPN1Q86U42 306 aaKnown RBP eCLIP39.54■■■■□ 3.92
CBS-217ENST00000496485 UNC13AQ9UPW8 1703 aa39.4■■■■□ 3.9
CBS-217ENST00000496485 BICRAQ9NZM4 1560 aa39.2■■■■□ 3.87
CBS-217ENST00000496485 ZCCHC6Q5VYS8 1495 aaKnown RBP39.12■■■■□ 3.85
CBS-217ENST00000496485 DCAF1Q9Y4B6 1507 aa39.03■■■■□ 3.84
CBS-217ENST00000496485 SHROOM4Q9ULL8 1493 aa38.78■■■■□ 3.8
CBS-217ENST00000496485 SCRIBQ14160 1630 aa38.63■■■■□ 3.77
CBS-217ENST00000496485 CC2D2AQ9P2K1 1620 aa38.36■■■■□ 3.73
CBS-217ENST00000496485 CECR2Q9BXF3 1484 aa38.31■■■■□ 3.72
CBS-217ENST00000496485 EIF4G1Q04637 1599 aaKnown RBP38.27■■■■□ 3.72
CBS-217ENST00000496485 NCAPD3P42695 1498 aa37.06■■■■□ 3.52
CBS-217ENST00000496485 ATAD2BQ9ULI0 1458 aa36.91■■■■□ 3.5
CBS-217ENST00000496485 SMARCA2P51531 1590 aa36.84■■■■□ 3.49
CBS-217ENST00000496485 SMARCA4P51532 1647 aa36.84■■■■□ 3.49
CBS-217ENST00000496485 HMGXB3Q12766 1538 aa36.78■■■■□ 3.48
CBS-217ENST00000496485 DNAJC5Q9H3Z4 198 aa36.76■■■■□ 3.48
CBS-217ENST00000496485 ERCC6Q03468 1493 aa36.75■■■■□ 3.47
CBS-217ENST00000496485 CUX2O14529 1486 aa36.71■■■■□ 3.47
CBS-217ENST00000496485 BAZ1AQ9NRL2 1556 aaPredicted RBP36.69■■■■□ 3.46
CBS-217ENST00000496485 BAZ1BQ9UIG0 1483 aaKnown RBP36.58■■■■□ 3.45
CBS-217ENST00000496485 PEG3Q9GZU2 1588 aa36.49■■■■□ 3.43
CBS-217ENST00000496485 NESP48681 1621 aa36.45■■■■□ 3.43
CBS-217ENST00000496485 MROH2BQ7Z745 1585 aa36.36■■■■□ 3.41
CBS-217ENST00000496485 LAMC3Q9Y6N6 1575 aa36.23■■■■□ 3.39
CBS-217ENST00000496485 THOC2Q8NI27 1593 aaKnown RBP36.1■■■■□ 3.37
CBS-217ENST00000496485 PDS5BQ9NTI5 1447 aa36.07■■■■□ 3.36
CBS-217ENST00000496485 KIF21AQ7Z4S6 1674 aa35.96■■■■□ 3.35
CBS-217ENST00000496485 CADPSQ9ULU8 1353 aa35.93■■■■□ 3.34
CBS-217ENST00000496485 WIZO95785 1651 aa35.9■■■■□ 3.34
CBS-217ENST00000496485 MRC2Q9UBG0 1479 aa35.73■■■■□ 3.31
CBS-217ENST00000496485 WDR62O43379 1518 aa35.62■■■■□ 3.29
CBS-217ENST00000496485 RSF1Q96T23 1441 aaPredicted RBP35.61■■■■□ 3.29
CBS-217ENST00000496485 CEP164Q9UPV0 1460 aa35.58■■■■□ 3.29
CBS-217ENST00000496485 FANCD2Q9BXW9 1451 aa35.52■■■■□ 3.28
CBS-217ENST00000496485 TOP2AP11388 1531 aaKnown RBP35.5■■■■□ 3.27
CBS-217ENST00000496485 CFTRP13569 1480 aa35.49■■■■□ 3.27
CBS-217ENST00000496485 URB2Q14146 1524 aaKnown RBP35.21■■■■□ 3.23
CBS-217ENST00000496485 TRIM41Q8WV44 630 aa35.11■■■■□ 3.21
CBS-217ENST00000496485 PRDM2Q13029 1718 aa35.08■■■■□ 3.21
CBS-217ENST00000496485 CCDC88BA6NC98 1476 aa35.08■■■■□ 3.21
CBS-217ENST00000496485 OSCARQ8IYS5 282 aa35.02■■■■□ 3.2
CBS-217ENST00000496485 IFT140Q96RY7 1462 aa34.88■■■■□ 3.17
CBS-217ENST00000496485 TOPBP1Q92547 1522 aa34.83■■■■□ 3.17
CBS-217ENST00000496485 ABCC8Q09428 1581 aa34.79■■■■□ 3.16
CBS-217ENST00000496485 ZNF608Q9ULD9 1512 aaPredicted RBP34.77■■■■□ 3.16
CBS-217ENST00000496485 DNMBPQ6XZF7 1577 aa34.7■■■■□ 3.14
CBS-217ENST00000496485 EIF4G3O43432 1585 aaKnown RBP34.59■■■■□ 3.13
CBS-217ENST00000496485 RIMBP3CA6NJZ7 1639 aa34.51■■■■□ 3.11
CBS-217ENST00000496485 RIMBP3BA6NNM3 1639 aa34.51■■■■□ 3.11
CBS-217ENST00000496485 RIMBP3Q9UFD9 1639 aa34.51■■■■□ 3.11
CBS-217ENST00000496485 TARBP1Q13395 1621 aaKnown RBP34.49■■■■□ 3.11
CBS-217ENST00000496485 AQRO60306 1485 aaKnown RBP eCLIP34.46■■■■□ 3.11
CBS-217ENST00000496485 POLA1P09884 1462 aaPredicted RBP34.46■■■■□ 3.11
CBS-217ENST00000496485 ARHGEF11O15085 1522 aa34.42■■■■□ 3.1
CBS-217ENST00000496485 SOGA1O94964 1423 aa34.33■■■■□ 3.09
CBS-217ENST00000496485 CHD1O14646 1710 aa34.32■■■■□ 3.08
CBS-217ENST00000496485 RAD54L2Q9Y4B4 1467 aa34.32■■■■□ 3.08
CBS-217ENST00000496485 FBLN2P98095 1184 aa34.3■■■■□ 3.08
CBS-217ENST00000496485 SUPT5HO00267 1087 aaKnown RBP34.26■■■■□ 3.08
CBS-217ENST00000496485 TDRD9Q8NDG6 1382 aaKnown RBP34.25■■■■□ 3.07
CBS-217ENST00000496485 FGD5Q6ZNL6 1462 aa34.24■■■■□ 3.07
CBS-217ENST00000496485 WDR97A6NE52 1622 aa34.2■■■■□ 3.07
CBS-217ENST00000496485 CYB5RLQ6IPT4 315 aa34.18■■■■□ 3.06
CBS-217ENST00000496485 CUX1P39880 1505 aa34.17■■■■□ 3.06
CBS-217ENST00000496485 SNAPC4Q5SXM2 1469 aa34.13■■■■□ 3.05
CBS-217ENST00000496485 ARAP1Q96P48 1450 aa34.07■■■■□ 3.05
CBS-217ENST00000496485 MAGI1Q96QZ7 1491 aaPredicted RBP34.07■■■■□ 3.04
CBS-217ENST00000496485 CHMP7Q8WUX9 453 aaPredicted RBP34.05■■■■□ 3.04
CBS-217ENST00000496485 GRIN2BQ13224 1484 aa34.05■■■■□ 3.04
CBS-217ENST00000496485 SYNJ1O43426 1573 aa33.98■■■■□ 3.03
CBS-217ENST00000496485 CLASP1Q7Z460 1538 aa33.96■■■■□ 3.03
CBS-217ENST00000496485 SYNJ2O15056 1496 aa33.95■■■■□ 3.02
CBS-217ENST00000496485 GAPVD1Q14C86 1478 aa33.9■■■■□ 3.02
CBS-217ENST00000496485 ABCA10Q8WWZ4 1543 aa33.86■■■■□ 3.01
CBS-217ENST00000496485 TRHP20396 242 aaPredicted RBP33.86■■■■□ 3.01
CBS-217ENST00000496485 PBRM1Q86U86 1689 aa33.84■■■■□ 3.01
CBS-217ENST00000496485 ABCA5Q8WWZ7 1642 aa33.79■■■■□ 3
CBS-217ENST00000496485 WRNQ14191 1432 aaPredicted RBP eCLIP33.74■■■□□ 2.99
CBS-217ENST00000496485 TOP2BQ02880 1626 aa33.61■■■□□ 2.97
CBS-217ENST00000496485 BIVM-ERCC5R4GMW8 1640 aa33.61■■■□□ 2.97
CBS-217ENST00000496485 GRIN2AQ12879 1464 aa33.6■■■□□ 2.97
CBS-217ENST00000496485 ADAMTS12P58397 1594 aa33.55■■■□□ 2.96
CBS-217ENST00000496485 FHAD1B1AJZ9 1412 aa33.49■■■□□ 2.95
CBS-217ENST00000496485 NUP160Q12769 1436 aa33.48■■■□□ 2.95
CBS-217ENST00000496485 CEP170Q5SW79 1584 aa33.45■■■□□ 2.95
CBS-217ENST00000496485 ERICH3Q5RHP9 1530 aa33.44■■■□□ 2.94
CBS-217ENST00000496485 ERCC6L2Q5T890 1561 aa33.38■■■□□ 2.93
CBS-217ENST00000496485 SHROOM2Q13796 1616 aa33.31■■■□□ 2.92
CBS-217ENST00000496485 PRG4Q92954 1404 aaPredicted RBP33.18■■■□□ 2.9
CBS-217ENST00000496485 JPH4Q96JJ6 628 aa33.15■■■□□ 2.9
CBS-217ENST00000496485 RUSC2Q8N2Y8 1516 aa33.07■■■□□ 2.89
CBS-217ENST00000496485 KIF27Q86VH2 1401 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms