RNA–Protein interactions for RNA: ENST00000495833.1

PPP2CA-204, Transcript of protein phosphatase 2 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP2CA, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2CA-204ENST00000495833 AEBP2Q6ZN18 517 aaPredicted RBP24.75■■□□□ 1.55
PPP2CA-204ENST00000495833 CHIC1Q5VXU3 224 aa23.53■■□□□ 1.36
PPP2CA-204ENST00000495833 SENP3Q9H4L4 574 aaPredicted RBP20.98■□□□□ 0.95
PPP2CA-204ENST00000495833 PHF23Q9BUL5 403 aaPredicted RBP20.74■□□□□ 0.91
PPP2CA-204ENST00000495833 NISCHQ9Y2I1 1504 aa20.68■□□□□ 0.9
PPP2CA-204ENST00000495833 FOXD1Q16676 465 aa19.6■□□□□ 0.73
PPP2CA-204ENST00000495833 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
PPP2CA-204ENST00000495833 PPP6R1Q9UPN7 881 aa18.43■□□□□ 0.54
PPP2CA-204ENST00000495833 ADRA2BP18089 450 aa18.34■□□□□ 0.53
PPP2CA-204ENST00000495833 PIAS4Q8N2W9 510 aaPredicted RBP18.29■□□□□ 0.52
PPP2CA-204ENST00000495833 MSH5O43196 834 aa18.23■□□□□ 0.51
PPP2CA-204ENST00000495833 CCDC180Q9P1Z9 1646 aa18.2■□□□□ 0.5
PPP2CA-204ENST00000495833 POTEDQ86YR6 584 aa17.83■□□□□ 0.44
PPP2CA-204ENST00000495833 ABCC9O60706 1549 aa17.72■□□□□ 0.43
PPP2CA-204ENST00000495833 DCAF8L2P0C7V8 631 aa17.36■□□□□ 0.37
PPP2CA-204ENST00000495833 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
PPP2CA-204ENST00000495833 NACADO15069 1562 aa17.15■□□□□ 0.34
PPP2CA-204ENST00000495833 MYO15BQ96JP2 1530 aa17.11■□□□□ 0.33
PPP2CA-204ENST00000495833 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
PPP2CA-204ENST00000495833 RB1CC1Q8TDY2 1594 aa17.11■□□□□ 0.33
PPP2CA-204ENST00000495833 MAPK8IP2Q13387 824 aaPredicted RBP16.82■□□□□ 0.28
PPP2CA-204ENST00000495833 DMRT2Q9Y5R5 561 aa16.7■□□□□ 0.26
PPP2CA-204ENST00000495833 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
PPP2CA-204ENST00000495833 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
PPP2CA-204ENST00000495833 SCAF1Q9H7N4 1312 aaKnown RBP16.65■□□□□ 0.26
PPP2CA-204ENST00000495833 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
PPP2CA-204ENST00000495833 BICRAQ9NZM4 1560 aa16.53■□□□□ 0.24
PPP2CA-204ENST00000495833 SHROOM4Q9ULL8 1493 aa16.53■□□□□ 0.24
PPP2CA-204ENST00000495833 PPP4R3CPQ6ZMV5 832 aa16.5■□□□□ 0.23
PPP2CA-204ENST00000495833 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
PPP2CA-204ENST00000495833 HOXD11P31277 338 aaPredicted RBP16.13■□□□□ 0.17
PPP2CA-204ENST00000495833 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
PPP2CA-204ENST00000495833 EIF4G1Q04637 1599 aaKnown RBP16.11■□□□□ 0.17
PPP2CA-204ENST00000495833 CECR2Q9BXF3 1484 aa16.1■□□□□ 0.17
PPP2CA-204ENST00000495833 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
PPP2CA-204ENST00000495833 RNF216Q9NWF9 866 aaPredicted RBP16.01■□□□□ 0.15
PPP2CA-204ENST00000495833 CC2D2AQ9P2K1 1620 aa15.98■□□□□ 0.15
PPP2CA-204ENST00000495833 SMARCA4P51532 1647 aa15.96■□□□□ 0.15
PPP2CA-204ENST00000495833 MROH2BQ7Z745 1585 aa15.93■□□□□ 0.14
PPP2CA-204ENST00000495833 DCAF8L1A6NGE4 600 aa15.89■□□□□ 0.13
PPP2CA-204ENST00000495833 ATAD2BQ9ULI0 1458 aa15.88■□□□□ 0.13
PPP2CA-204ENST00000495833 RSF1Q96T23 1441 aaPredicted RBP15.86■□□□□ 0.13
PPP2CA-204ENST00000495833 NCAPD3P42695 1498 aa15.85■□□□□ 0.13
PPP2CA-204ENST00000495833 SMARCA2P51531 1590 aa15.85■□□□□ 0.13
PPP2CA-204ENST00000495833 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
PPP2CA-204ENST00000495833 PEG3Q9GZU2 1588 aa15.8■□□□□ 0.12
PPP2CA-204ENST00000495833 BAZ1BQ9UIG0 1483 aaKnown RBP15.77■□□□□ 0.11
PPP2CA-204ENST00000495833 HMGXB3Q12766 1538 aa15.73■□□□□ 0.11
PPP2CA-204ENST00000495833 WIZO95785 1651 aa15.73■□□□□ 0.11
PPP2CA-204ENST00000495833 SUPT5HO00267 1087 aaKnown RBP15.72■□□□□ 0.11
PPP2CA-204ENST00000495833 NPM3O75607 178 aaKnown RBP15.71■□□□□ 0.11
PPP2CA-204ENST00000495833 RNF39Q9H2S5 420 aa15.63■□□□□ 0.09
PPP2CA-204ENST00000495833 CACNB1Q02641 598 aaPredicted RBP15.61■□□□□ 0.09
PPP2CA-204ENST00000495833 TOP2AP11388 1531 aaKnown RBP15.61■□□□□ 0.09
PPP2CA-204ENST00000495833 KCNA4P22459 653 aa15.5■□□□□ 0.07
PPP2CA-204ENST00000495833 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
PPP2CA-204ENST00000495833 CADPSQ9ULU8 1353 aa15.43■□□□□ 0.06
PPP2CA-204ENST00000495833 NESP48681 1621 aa15.37■□□□□ 0.05
PPP2CA-204ENST00000495833 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
PPP2CA-204ENST00000495833 C1QBPQ07021 282 aaKnown RBP15.35■□□□□ 0.05
PPP2CA-204ENST00000495833 CFTRP13569 1480 aa15.34■□□□□ 0.05
PPP2CA-204ENST00000495833 PDS5BQ9NTI5 1447 aa15.33■□□□□ 0.04
PPP2CA-204ENST00000495833 ERCC6Q03468 1493 aa15.28■□□□□ 0.04
PPP2CA-204ENST00000495833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.27■□□□□ 0.042e-6■■□□□ 11.9
PPP2CA-204ENST00000495833 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.03
PPP2CA-204ENST00000495833 CEP164Q9UPV0 1460 aa15.17■□□□□ 0.02
PPP2CA-204ENST00000495833 KIF21AQ7Z4S6 1674 aa15.1■□□□□ 0.01
PPP2CA-204ENST00000495833 MRC2Q9UBG0 1479 aa15.1■□□□□ 0.01
PPP2CA-204ENST00000495833 PRDM2Q13029 1718 aa15.07■□□□□ 0
PPP2CA-204ENST00000495833 U3KPZ7 1027 aaPredicted RBP15.07■□□□□ 0
PPP2CA-204ENST00000495833 ABCC8Q09428 1581 aa15.03■□□□□ -0
PPP2CA-204ENST00000495833 THOC2Q8NI27 1593 aaKnown RBP15.02■□□□□ -0
PPP2CA-204ENST00000495833 URB2Q14146 1524 aaKnown RBP15.02■□□□□ -0
PPP2CA-204ENST00000495833 CUX2O14529 1486 aa15.01□□□□□ -0.01
PPP2CA-204ENST00000495833 SLC4A2P04920 1241 aa15.01□□□□□ -0.01
PPP2CA-204ENST00000495833 WDR62O43379 1518 aa15.01□□□□□ -0.01
PPP2CA-204ENST00000495833 TOPBP1Q92547 1522 aa14.97□□□□□ -0.01
PPP2CA-204ENST00000495833 WRNQ14191 1432 aaPredicted RBP eCLIP14.97□□□□□ -0.01
PPP2CA-204ENST00000495833 DNMBPQ6XZF7 1577 aa14.95□□□□□ -0.02
PPP2CA-204ENST00000495833 CUX1P39880 1505 aa14.92□□□□□ -0.02
PPP2CA-204ENST00000495833 SOGA1O94964 1423 aa14.88□□□□□ -0.03
PPP2CA-204ENST00000495833 POLA1P09884 1462 aaPredicted RBP14.87□□□□□ -0.03
PPP2CA-204ENST00000495833 TRIM41Q8WV44 630 aa14.86□□□□□ -0.03
PPP2CA-204ENST00000495833 FGD5Q6ZNL6 1462 aa14.86□□□□□ -0.03
PPP2CA-204ENST00000495833 IFT140Q96RY7 1462 aa14.86□□□□□ -0.03
PPP2CA-204ENST00000495833 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
PPP2CA-204ENST00000495833 SYNJ1O43426 1573 aa14.83□□□□□ -0.04
PPP2CA-204ENST00000495833 RAD54L2Q9Y4B4 1467 aa14.82□□□□□ -0.04
PPP2CA-204ENST00000495833 SPINK5Q9NQ38 1064 aaPredicted RBP14.81□□□□□ -0.04
PPP2CA-204ENST00000495833 BIVM-ERCC5R4GMW8 1640 aa14.8□□□□□ -0.04
PPP2CA-204ENST00000495833 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
PPP2CA-204ENST00000495833 ZNF608Q9ULD9 1512 aaPredicted RBP14.75□□□□□ -0.05
PPP2CA-204ENST00000495833 TARBP1Q13395 1621 aaKnown RBP14.74□□□□□ -0.05
PPP2CA-204ENST00000495833 ABCA10Q8WWZ4 1543 aa14.73□□□□□ -0.05
PPP2CA-204ENST00000495833 AQRO60306 1485 aaKnown RBP eCLIP14.73□□□□□ -0.05
PPP2CA-204ENST00000495833 CAPN15O75808 1086 aa14.69□□□□□ -0.06
PPP2CA-204ENST00000495833 GAPVD1Q14C86 1478 aa14.67□□□□□ -0.06
PPP2CA-204ENST00000495833 WDR97A6NE52 1622 aa14.66□□□□□ -0.06
PPP2CA-204ENST00000495833 DSG3P32926 999 aa14.66□□□□□ -0.06
PPP2CA-204ENST00000495833 KIF27Q86VH2 1401 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms