RNA–Protein interactions for RNA: ENST00000495563.5

RTL8C-203, Transcript of retrotransposon Gag like 8C, humanhuman

TSL 5

Gene RTL8C, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8C-203ENST00000495563 NISCHQ9Y2I1 1504 aa28.79■■■□□ 2.2
RTL8C-203ENST00000495563 CCDC180Q9P1Z9 1646 aa25.67■■□□□ 1.7
RTL8C-203ENST00000495563 ABCC9O60706 1549 aa25.22■■□□□ 1.63
RTL8C-203ENST00000495563 RB1CC1Q8TDY2 1594 aa24.14■■□□□ 1.45
RTL8C-203ENST00000495563 NACADO15069 1562 aa24.08■■□□□ 1.44
RTL8C-203ENST00000495563 ZCCHC6Q5VYS8 1495 aaKnown RBP23.99■■□□□ 1.43
RTL8C-203ENST00000495563 DCAF8L2P0C7V8 631 aa23.93■■□□□ 1.42
RTL8C-203ENST00000495563 MYO15BQ96JP2 1530 aa23.87■■□□□ 1.41
RTL8C-203ENST00000495563 UNC13AQ9UPW8 1703 aa23.86■■□□□ 1.41
RTL8C-203ENST00000495563 DCAF1Q9Y4B6 1507 aa23.76■■□□□ 1.39
RTL8C-203ENST00000495563 BICRAQ9NZM4 1560 aa23.58■■□□□ 1.37
RTL8C-203ENST00000495563 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
RTL8C-203ENST00000495563 SCRIBQ14160 1630 aa23.47■■□□□ 1.35
RTL8C-203ENST00000495563 DNAJC5BQ9UF47 199 aa23.3■■□□□ 1.32
RTL8C-203ENST00000495563 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
RTL8C-203ENST00000495563 EIF4G1Q04637 1599 aaKnown RBP22.88■■□□□ 1.25
RTL8C-203ENST00000495563 CC2D2AQ9P2K1 1620 aa22.83■■□□□ 1.25
RTL8C-203ENST00000495563 CECR2Q9BXF3 1484 aa22.61■■□□□ 1.21
RTL8C-203ENST00000495563 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
RTL8C-203ENST00000495563 BAZ1AQ9NRL2 1556 aaPredicted RBP22.27■■□□□ 1.16
RTL8C-203ENST00000495563 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
RTL8C-203ENST00000495563 ATAD2BQ9ULI0 1458 aa22.25■■□□□ 1.15
RTL8C-203ENST00000495563 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
RTL8C-203ENST00000495563 SMARCA2P51531 1590 aa22.17■■□□□ 1.14
RTL8C-203ENST00000495563 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
RTL8C-203ENST00000495563 HMGXB3Q12766 1538 aa22.14■■□□□ 1.13
RTL8C-203ENST00000495563 WIZO95785 1651 aa22.05■■□□□ 1.12
RTL8C-203ENST00000495563 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
RTL8C-203ENST00000495563 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.1
RTL8C-203ENST00000495563 NESP48681 1621 aa21.86■■□□□ 1.09
RTL8C-203ENST00000495563 TOP2AP11388 1531 aaKnown RBP21.71■■□□□ 1.07
RTL8C-203ENST00000495563 LAMC3Q9Y6N6 1575 aa21.66■■□□□ 1.06
RTL8C-203ENST00000495563 KIF21AQ7Z4S6 1674 aa21.65■■□□□ 1.06
RTL8C-203ENST00000495563 ERCC6Q03468 1493 aa21.64■■□□□ 1.05
RTL8C-203ENST00000495563 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
RTL8C-203ENST00000495563 CADPSQ9ULU8 1353 aa21.53■■□□□ 1.04
RTL8C-203ENST00000495563 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.03
RTL8C-203ENST00000495563 CUX2O14529 1486 aa21.45■■□□□ 1.03
RTL8C-203ENST00000495563 CFTRP13569 1480 aa21.43■■□□□ 1.02
RTL8C-203ENST00000495563 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
RTL8C-203ENST00000495563 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
RTL8C-203ENST00000495563 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
RTL8C-203ENST00000495563 MRC2Q9UBG0 1479 aa21.31■■□□□ 1
RTL8C-203ENST00000495563 CEP164Q9UPV0 1460 aa21.3■■□□□ 1
RTL8C-203ENST00000495563 WDR62O43379 1518 aa21.29■■□□□ 1
RTL8C-203ENST00000495563 URB2Q14146 1524 aaKnown RBP21.22■□□□□ 0.99
RTL8C-203ENST00000495563 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
RTL8C-203ENST00000495563 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
RTL8C-203ENST00000495563 DNMBPQ6XZF7 1577 aa20.98■□□□□ 0.95
RTL8C-203ENST00000495563 DNAJC5Q9H3Z4 198 aa20.91■□□□□ 0.94
RTL8C-203ENST00000495563 ZNF608Q9ULD9 1512 aaPredicted RBP20.88■□□□□ 0.93
RTL8C-203ENST00000495563 CUX1P39880 1505 aa20.88■□□□□ 0.93
RTL8C-203ENST00000495563 TARBP1Q13395 1621 aaKnown RBP20.87■□□□□ 0.93
RTL8C-203ENST00000495563 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
RTL8C-203ENST00000495563 POLA1P09884 1462 aaPredicted RBP20.84■□□□□ 0.93
RTL8C-203ENST00000495563 IFT140Q96RY7 1462 aa20.84■□□□□ 0.93
RTL8C-203ENST00000495563 EIF4G3O43432 1585 aaKnown RBP20.8■□□□□ 0.92
RTL8C-203ENST00000495563 RAD54L2Q9Y4B4 1467 aa20.78■□□□□ 0.92
RTL8C-203ENST00000495563 FGD5Q6ZNL6 1462 aa20.77■□□□□ 0.92
RTL8C-203ENST00000495563 WDR97A6NE52 1622 aa20.74■□□□□ 0.91
RTL8C-203ENST00000495563 AQRO60306 1485 aaKnown RBP eCLIP20.69■□□□□ 0.92e-11■□□□□ 10.5
RTL8C-203ENST00000495563 SYNJ1O43426 1573 aa20.69■□□□□ 0.9
RTL8C-203ENST00000495563 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
RTL8C-203ENST00000495563 SOGA1O94964 1423 aa20.66■□□□□ 0.9
RTL8C-203ENST00000495563 TOP2BQ02880 1626 aa20.64■□□□□ 0.89
RTL8C-203ENST00000495563 CHD1O14646 1710 aa20.63■□□□□ 0.89
RTL8C-203ENST00000495563 TDRD9Q8NDG6 1382 aaKnown RBP20.61■□□□□ 0.89
RTL8C-203ENST00000495563 WRNQ14191 1432 aaPredicted RBP eCLIP20.59■□□□□ 0.89
RTL8C-203ENST00000495563 PBRM1Q86U86 1689 aa20.57■□□□□ 0.88
RTL8C-203ENST00000495563 ABCA5Q8WWZ7 1642 aa20.56■□□□□ 0.88
RTL8C-203ENST00000495563 ABCA10Q8WWZ4 1543 aa20.53■□□□□ 0.88
RTL8C-203ENST00000495563 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
RTL8C-203ENST00000495563 GAPVD1Q14C86 1478 aa20.45■□□□□ 0.86
RTL8C-203ENST00000495563 OSCARQ8IYS5 282 aa20.45■□□□□ 0.86
RTL8C-203ENST00000495563 GRIN2BQ13224 1484 aa20.44■□□□□ 0.86
RTL8C-203ENST00000495563 MAGI1Q96QZ7 1491 aaPredicted RBP20.41■□□□□ 0.86
RTL8C-203ENST00000495563 RIMBP3CA6NJZ7 1639 aa20.37■□□□□ 0.85
RTL8C-203ENST00000495563 RIMBP3BA6NNM3 1639 aa20.37■□□□□ 0.85
RTL8C-203ENST00000495563 RIMBP3Q9UFD9 1639 aa20.37■□□□□ 0.85
RTL8C-203ENST00000495563 ADAMTS12P58397 1594 aa20.35■□□□□ 0.85
RTL8C-203ENST00000495563 SYNJ2O15056 1496 aa20.34■□□□□ 0.85
RTL8C-203ENST00000495563 CLASP1Q7Z460 1538 aa20.33■□□□□ 0.85
RTL8C-203ENST00000495563 FBLN2P98095 1184 aa20.33■□□□□ 0.85
RTL8C-203ENST00000495563 ARHGEF11O15085 1522 aa20.3■□□□□ 0.84
RTL8C-203ENST00000495563 ERICH3Q5RHP9 1530 aa20.27■□□□□ 0.83
RTL8C-203ENST00000495563 CEP170Q5SW79 1584 aa20.23■□□□□ 0.83
RTL8C-203ENST00000495563 CHMP7Q8WUX9 453 aaPredicted RBP20.23■□□□□ 0.83
RTL8C-203ENST00000495563 GRIN2AQ12879 1464 aa20.23■□□□□ 0.83
RTL8C-203ENST00000495563 TRIM41Q8WV44 630 aa20.18■□□□□ 0.82
RTL8C-203ENST00000495563 FHAD1B1AJZ9 1412 aa20.18■□□□□ 0.82
RTL8C-203ENST00000495563 ARAP1Q96P48 1450 aa20.17■□□□□ 0.82
RTL8C-203ENST00000495563 NUP160Q12769 1436 aa20.15■□□□□ 0.82
RTL8C-203ENST00000495563 ERCC6L2Q5T890 1561 aa20.12■□□□□ 0.81
RTL8C-203ENST00000495563 KIF27Q86VH2 1401 aa20.11■□□□□ 0.81
RTL8C-203ENST00000495563 IGF1RP08069 1367 aa20.1■□□□□ 0.81
RTL8C-203ENST00000495563 RUSC2Q8N2Y8 1516 aa20.1■□□□□ 0.81
RTL8C-203ENST00000495563 SHROOM2Q13796 1616 aa20.09■□□□□ 0.81
RTL8C-203ENST00000495563 CUL7Q14999 1698 aa20.09■□□□□ 0.81
RTL8C-203ENST00000495563 CYB5RLQ6IPT4 315 aa20■□□□□ 0.79
RTL8C-203ENST00000495563 CARMIL1Q5VZK9 1371 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms