RNA–Protein interactions for RNA: ENST00000495347.5

PRKCZ-221, Transcript of protein kinase C zeta, humanhuman

TSL 4

Gene PRKCZ, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCZ-221ENST00000495347 SF3B1O75533 1304 aaKnown RBP eCLIP17.14■□□□□ 0.333e-9■■■■■ 206.8
PRKCZ-221ENST00000495347 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.04□□□□□ -0.327e-7■■■■■ 64.4
PRKCZ-221ENST00000495347 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.82□□□□□ -0.048e-8■■■■■ 61.9
PRKCZ-221ENST00000495347 PCBP2Q15366 365 aaKnown RBP eCLIP14.16□□□□□ -0.144e-7■■■■■ 53.8
PRKCZ-221ENST00000495347 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.5□□□□□ -0.411e-7■■■■■ 51.6
PRKCZ-221ENST00000495347 BCCIPQ9P287 314 aaKnown RBP eCLIP16.47■□□□□ 0.231e-6■■■■■ 35.1
PRKCZ-221ENST00000495347 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.61□□□□□ -0.231e-6■■■■■ 33
PRKCZ-221ENST00000495347 EFTUD2Q15029 972 aaKnown RBP eCLIP14.16□□□□□ -0.142e-7■■■■■ 32.6
PRKCZ-221ENST00000495347 HNRNPMP52272 730 aaKnown RBP eCLIP25.28■■□□□ 1.642e-7■■■■■ 30.7
PRKCZ-221ENST00000495347 RBM5P52756 815 aaKnown RBP eCLIP19.65■□□□□ 0.748e-8■■■■■ 27.9
PRKCZ-221ENST00000495347 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.17■□□□□ 0.665e-6■■■■■ 27.2
PRKCZ-221ENST00000495347 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.13■□□□□ 0.652e-11■■■■■ 27.2
PRKCZ-221ENST00000495347 NCBP2P52298 156 aaKnown RBP eCLIP13.73□□□□□ -0.213e-6■■■■□ 21.7
PRKCZ-221ENST00000495347 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.9■□□□□ 0.144e-6■■■■□ 21
PRKCZ-221ENST00000495347 SF3B4Q15427 424 aaKnown RBP eCLIP14.01□□□□□ -0.173e-6■■■■□ 20.6
PRKCZ-221ENST00000495347 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.16■□□□□ 0.341e-6■■■■□ 20.5
PRKCZ-221ENST00000495347 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■■■■□ 19.7
PRKCZ-221ENST00000495347 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.8■□□□□ 0.125e-6■■■□□ 17.9
PRKCZ-221ENST00000495347 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.68□□□□□ -0.066e-7■■■□□ 17.4
PRKCZ-221ENST00000495347 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.57■□□□□ 0.565e-6■■■□□ 16.1
PRKCZ-221ENST00000495347 ILF3Q12906 894 aaKnown RBP eCLIP15.41■□□□□ 0.063e-6■■■□□ 16
PRKCZ-221ENST00000495347 GTF2F1P35269 517 aaKnown RBP eCLIP17.88■□□□□ 0.455e-7■■■□□ 15.3
PRKCZ-221ENST00000495347 PRPF4O43172 522 aaKnown RBP eCLIP14.58□□□□□ -0.081e-6■■■□□ 15.3
PRKCZ-221ENST00000495347 SFPQP23246 707 aaKnown RBP eCLIP17.36■□□□□ 0.379e-8■■■□□ 15
PRKCZ-221ENST00000495347 HNRNPKP61978 463 aaKnown RBP eCLIP15.76■□□□□ 0.113e-7■■□□□ 14
PRKCZ-221ENST00000495347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.41■■□□□ 1.52e-7■■□□□ 13.4
PRKCZ-221ENST00000495347 NKRFO15226 690 aaKnown RBP eCLIP18.15■□□□□ 0.53e-6■■□□□ 12.3
PRKCZ-221ENST00000495347 PPIGQ13427 754 aaKnown RBP eCLIP18.48■□□□□ 0.551e-14■□□□□ 10.6
Retrieved 28 of 28 RNA–protein pairs in 12.2 ms