RNA–Protein interactions for RNA: ENST00000495300.1

PBX2-204, Transcript of PBX homeobox 2, humanhuman

TSL 3

Gene PBX2, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX2-204ENST00000495300 NISCHQ9Y2I1 1504 aa33.34■■■□□ 2.93
PBX2-204ENST00000495300 CCDC180Q9P1Z9 1646 aa29.63■■■□□ 2.33
PBX2-204ENST00000495300 ABCC9O60706 1549 aa28.81■■■□□ 2.2
PBX2-204ENST00000495300 ZCCHC6Q5VYS8 1495 aaKnown RBP27.8■■■□□ 2.04
PBX2-204ENST00000495300 NACADO15069 1562 aa27.8■■■□□ 2.04
PBX2-204ENST00000495300 RB1CC1Q8TDY2 1594 aa27.79■■■□□ 2.04
PBX2-204ENST00000495300 MYO15BQ96JP2 1530 aa27.71■■■□□ 2.03
PBX2-204ENST00000495300 DCAF8L2P0C7V8 631 aa27.67■■■□□ 2.02
PBX2-204ENST00000495300 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
PBX2-204ENST00000495300 UNC13AQ9UPW8 1703 aa27.25■■□□□ 1.95
PBX2-204ENST00000495300 BICRAQ9NZM4 1560 aa27.01■■□□□ 1.92
PBX2-204ENST00000495300 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
PBX2-204ENST00000495300 PABPN1Q86U42 306 aaKnown RBP eCLIP26.91■■□□□ 1.9
PBX2-204ENST00000495300 SHROOM4Q9ULL8 1493 aa26.7■■□□□ 1.87
PBX2-204ENST00000495300 DNAJC5BQ9UF47 199 aa26.4■■□□□ 1.82
PBX2-204ENST00000495300 EIF4G1Q04637 1599 aaKnown RBP26.24■■□□□ 1.79
PBX2-204ENST00000495300 CC2D2AQ9P2K1 1620 aa26.11■■□□□ 1.77
PBX2-204ENST00000495300 CECR2Q9BXF3 1484 aa25.96■■□□□ 1.75
PBX2-204ENST00000495300 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
PBX2-204ENST00000495300 BAZ1AQ9NRL2 1556 aaPredicted RBP25.82■■□□□ 1.72
PBX2-204ENST00000495300 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
PBX2-204ENST00000495300 ATAD2BQ9ULI0 1458 aa25.67■■□□□ 1.7
PBX2-204ENST00000495300 NCAPD3P42695 1498 aa25.66■■□□□ 1.7
PBX2-204ENST00000495300 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
PBX2-204ENST00000495300 SMARCA2P51531 1590 aa25.64■■□□□ 1.69
PBX2-204ENST00000495300 HMGXB3Q12766 1538 aa25.55■■□□□ 1.68
PBX2-204ENST00000495300 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
PBX2-204ENST00000495300 WIZO95785 1651 aa25.44■■□□□ 1.66
PBX2-204ENST00000495300 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
PBX2-204ENST00000495300 TOP2AP11388 1531 aaKnown RBP25.15■■□□□ 1.62
PBX2-204ENST00000495300 NESP48681 1621 aa24.99■■□□□ 1.59
PBX2-204ENST00000495300 LAMC3Q9Y6N6 1575 aa24.96■■□□□ 1.59
PBX2-204ENST00000495300 CADPSQ9ULU8 1353 aa24.88■■□□□ 1.57
PBX2-204ENST00000495300 CCDC88BA6NC98 1476 aa24.85■■□□□ 1.57
PBX2-204ENST00000495300 CFTRP13569 1480 aa24.79■■□□□ 1.56
PBX2-204ENST00000495300 ERCC6Q03468 1493 aa24.78■■□□□ 1.56
PBX2-204ENST00000495300 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
PBX2-204ENST00000495300 PDS5BQ9NTI5 1447 aa24.74■■□□□ 1.55
PBX2-204ENST00000495300 KIF21AQ7Z4S6 1674 aa24.74■■□□□ 1.55
PBX2-204ENST00000495300 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
PBX2-204ENST00000495300 THOC2Q8NI27 1593 aaKnown RBP24.63■■□□□ 1.53
PBX2-204ENST00000495300 FANCD2Q9BXW9 1451 aa24.59■■□□□ 1.53
PBX2-204ENST00000495300 CUX2O14529 1486 aa24.55■■□□□ 1.52
PBX2-204ENST00000495300 CEP164Q9UPV0 1460 aa24.54■■□□□ 1.52
PBX2-204ENST00000495300 MRC2Q9UBG0 1479 aa24.5■■□□□ 1.51
PBX2-204ENST00000495300 WDR62O43379 1518 aa24.45■■□□□ 1.51
PBX2-204ENST00000495300 URB2Q14146 1524 aaKnown RBP24.37■■□□□ 1.49
PBX2-204ENST00000495300 TOPBP1Q92547 1522 aa24.23■■□□□ 1.47
PBX2-204ENST00000495300 ABCC8Q09428 1581 aa24.22■■□□□ 1.47
PBX2-204ENST00000495300 DNMBPQ6XZF7 1577 aa24.21■■□□□ 1.47
PBX2-204ENST00000495300 CUX1P39880 1505 aa24.1■■□□□ 1.45
PBX2-204ENST00000495300 POLA1P09884 1462 aaPredicted RBP24.03■■□□□ 1.44
PBX2-204ENST00000495300 IFT140Q96RY7 1462 aa24.03■■□□□ 1.44
PBX2-204ENST00000495300 TARBP1Q13395 1621 aaKnown RBP24■■□□□ 1.43
PBX2-204ENST00000495300 FGD5Q6ZNL6 1462 aa23.98■■□□□ 1.43
PBX2-204ENST00000495300 BIVM-ERCC5R4GMW8 1640 aa23.95■■□□□ 1.42
PBX2-204ENST00000495300 WRNQ14191 1432 aaPredicted RBP eCLIP23.94■■□□□ 1.42
PBX2-204ENST00000495300 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
PBX2-204ENST00000495300 TOP2BQ02880 1626 aa23.93■■□□□ 1.42
PBX2-204ENST00000495300 SYNJ1O43426 1573 aa23.93■■□□□ 1.42
PBX2-204ENST00000495300 RAD54L2Q9Y4B4 1467 aa23.91■■□□□ 1.42
PBX2-204ENST00000495300 SOGA1O94964 1423 aa23.91■■□□□ 1.42
PBX2-204ENST00000495300 EIF4G3O43432 1585 aaKnown RBP23.86■■□□□ 1.41
PBX2-204ENST00000495300 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
PBX2-204ENST00000495300 AQRO60306 1485 aaKnown RBP eCLIP23.8■■□□□ 1.41e-9■■■■■ 37.7
PBX2-204ENST00000495300 ABCA10Q8WWZ4 1543 aa23.77■■□□□ 1.4
PBX2-204ENST00000495300 TDRD9Q8NDG6 1382 aaKnown RBP23.75■■□□□ 1.39
PBX2-204ENST00000495300 ABCA5Q8WWZ7 1642 aa23.69■■□□□ 1.38
PBX2-204ENST00000495300 DNAJC5Q9H3Z4 198 aa23.67■■□□□ 1.38
PBX2-204ENST00000495300 GAPVD1Q14C86 1478 aa23.64■■□□□ 1.38
PBX2-204ENST00000495300 PBRM1Q86U86 1689 aa23.63■■□□□ 1.37
PBX2-204ENST00000495300 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
PBX2-204ENST00000495300 SNAPC4Q5SXM2 1469 aa23.57■■□□□ 1.36
PBX2-204ENST00000495300 MAGI1Q96QZ7 1491 aaPredicted RBP23.56■■□□□ 1.36
PBX2-204ENST00000495300 CHD1O14646 1710 aa23.56■■□□□ 1.36
PBX2-204ENST00000495300 OSCARQ8IYS5 282 aa23.51■■□□□ 1.35
PBX2-204ENST00000495300 ERICH3Q5RHP9 1530 aa23.49■■□□□ 1.35
PBX2-204ENST00000495300 SYNJ2O15056 1496 aa23.47■■□□□ 1.35
PBX2-204ENST00000495300 ADAMTS12P58397 1594 aa23.43■■□□□ 1.34
PBX2-204ENST00000495300 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
PBX2-204ENST00000495300 FBLN2P98095 1184 aa23.4■■□□□ 1.34
PBX2-204ENST00000495300 CHMP7Q8WUX9 453 aaPredicted RBP23.39■■□□□ 1.33
PBX2-204ENST00000495300 TRIM41Q8WV44 630 aa23.39■■□□□ 1.33
PBX2-204ENST00000495300 FHAD1B1AJZ9 1412 aa23.36■■□□□ 1.33
PBX2-204ENST00000495300 IGF1RP08069 1367 aa23.35■■□□□ 1.33
PBX2-204ENST00000495300 GRIN2AQ12879 1464 aa23.33■■□□□ 1.33
PBX2-204ENST00000495300 CLASP1Q7Z460 1538 aa23.3■■□□□ 1.32
PBX2-204ENST00000495300 CUL7Q14999 1698 aa23.3■■□□□ 1.32
PBX2-204ENST00000495300 RUSC2Q8N2Y8 1516 aa23.28■■□□□ 1.32
PBX2-204ENST00000495300 NUP160Q12769 1436 aa23.24■■□□□ 1.31
PBX2-204ENST00000495300 CEP170Q5SW79 1584 aa23.23■■□□□ 1.31
PBX2-204ENST00000495300 CHIC1Q5VXU3 224 aa23.22■■□□□ 1.31
PBX2-204ENST00000495300 RIMBP3CA6NJZ7 1639 aa23.19■■□□□ 1.3
PBX2-204ENST00000495300 RIMBP3BA6NNM3 1639 aa23.19■■□□□ 1.3
PBX2-204ENST00000495300 RIMBP3Q9UFD9 1639 aa23.19■■□□□ 1.3
PBX2-204ENST00000495300 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
PBX2-204ENST00000495300 ARHGEF11O15085 1522 aa23.18■■□□□ 1.3
PBX2-204ENST00000495300 SHROOM2Q13796 1616 aa23.09■■□□□ 1.29
PBX2-204ENST00000495300 RAPGEF2Q9Y4G8 1499 aa23.06■■□□□ 1.28
PBX2-204ENST00000495300 EEA1Q15075 1411 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms