RNA–Protein interactions for RNA: ENST00000494856.3

RN7SL127P-201, Transcript of RNA, 7SL, cytoplasmic 127, pseudogene, humanhuman

BASIC

Gene RN7SL127P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL127P-201ENST00000494856 NISCHQ9Y2I1 1504 aa25.82■■□□□ 1.72
RN7SL127P-201ENST00000494856 ABCC9O60706 1549 aa23.4■■□□□ 1.34
RN7SL127P-201ENST00000494856 CCDC180Q9P1Z9 1646 aa23■■□□□ 1.27
RN7SL127P-201ENST00000494856 DNAJC5BQ9UF47 199 aa22.16■■□□□ 1.14
RN7SL127P-201ENST00000494856 DCAF8L2P0C7V8 631 aa22.11■■□□□ 1.13
RN7SL127P-201ENST00000494856 RB1CC1Q8TDY2 1594 aa22.04■■□□□ 1.12
RN7SL127P-201ENST00000494856 PABPN1Q86U42 306 aaKnown RBP eCLIP21.91■■□□□ 1.1
RN7SL127P-201ENST00000494856 NACADO15069 1562 aa21.86■■□□□ 1.09
RN7SL127P-201ENST00000494856 UNC13AQ9UPW8 1703 aa21.49■■□□□ 1.03
RN7SL127P-201ENST00000494856 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
RN7SL127P-201ENST00000494856 MYO15BQ96JP2 1530 aa21.46■■□□□ 1.03
RN7SL127P-201ENST00000494856 ZCCHC6Q5VYS8 1495 aaKnown RBP21.35■■□□□ 1.01
RN7SL127P-201ENST00000494856 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
RN7SL127P-201ENST00000494856 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
RN7SL127P-201ENST00000494856 CECR2Q9BXF3 1484 aa21.03■□□□□ 0.96
RN7SL127P-201ENST00000494856 CC2D2AQ9P2K1 1620 aa21.02■□□□□ 0.96
RN7SL127P-201ENST00000494856 SHROOM4Q9ULL8 1493 aa20.98■□□□□ 0.95
RN7SL127P-201ENST00000494856 EIF4G1Q04637 1599 aaKnown RBP20.93■□□□□ 0.94
RN7SL127P-201ENST00000494856 DNAJC5Q9H3Z4 198 aa20.28■□□□□ 0.84
RN7SL127P-201ENST00000494856 NCAPD3P42695 1498 aa20.26■□□□□ 0.83
RN7SL127P-201ENST00000494856 ATAD2BQ9ULI0 1458 aa20.24■□□□□ 0.83
RN7SL127P-201ENST00000494856 ERCC6Q03468 1493 aa20.13■□□□□ 0.81
RN7SL127P-201ENST00000494856 SMARCA4P51532 1647 aa20.11■□□□□ 0.81
RN7SL127P-201ENST00000494856 NESP48681 1621 aa20.09■□□□□ 0.81
RN7SL127P-201ENST00000494856 SMARCA2P51531 1590 aa20.05■□□□□ 0.8
RN7SL127P-201ENST00000494856 CUX2O14529 1486 aa20.03■□□□□ 0.8
RN7SL127P-201ENST00000494856 HMGXB3Q12766 1538 aa20.02■□□□□ 0.79
RN7SL127P-201ENST00000494856 BAZ1BQ9UIG0 1483 aaKnown RBP20■□□□□ 0.79
RN7SL127P-201ENST00000494856 BAZ1AQ9NRL2 1556 aaPredicted RBP19.98■□□□□ 0.79
RN7SL127P-201ENST00000494856 MROH2BQ7Z745 1585 aa19.96■□□□□ 0.79
RN7SL127P-201ENST00000494856 PEG3Q9GZU2 1588 aa19.85■□□□□ 0.77
RN7SL127P-201ENST00000494856 THOC2Q8NI27 1593 aaKnown RBP19.74■□□□□ 0.75
RN7SL127P-201ENST00000494856 LAMC3Q9Y6N6 1575 aa19.73■□□□□ 0.75
RN7SL127P-201ENST00000494856 PDS5BQ9NTI5 1447 aa19.7■□□□□ 0.74
RN7SL127P-201ENST00000494856 CADPSQ9ULU8 1353 aa19.7■□□□□ 0.74
RN7SL127P-201ENST00000494856 WIZO95785 1651 aa19.68■□□□□ 0.74
RN7SL127P-201ENST00000494856 KIF21AQ7Z4S6 1674 aa19.66■□□□□ 0.74
RN7SL127P-201ENST00000494856 MRC2Q9UBG0 1479 aa19.54■□□□□ 0.72
RN7SL127P-201ENST00000494856 RSF1Q96T23 1441 aaPredicted RBP19.53■□□□□ 0.72
RN7SL127P-201ENST00000494856 TRIM41Q8WV44 630 aa19.48■□□□□ 0.71
RN7SL127P-201ENST00000494856 FANCD2Q9BXW9 1451 aa19.46■□□□□ 0.71
RN7SL127P-201ENST00000494856 WDR62O43379 1518 aa19.45■□□□□ 0.7
RN7SL127P-201ENST00000494856 CEP164Q9UPV0 1460 aa19.44■□□□□ 0.7
RN7SL127P-201ENST00000494856 CFTRP13569 1480 aa19.41■□□□□ 0.7
RN7SL127P-201ENST00000494856 TOP2AP11388 1531 aaKnown RBP19.36■□□□□ 0.69
RN7SL127P-201ENST00000494856 URB2Q14146 1524 aaKnown RBP19.32■□□□□ 0.68
RN7SL127P-201ENST00000494856 CCDC88BA6NC98 1476 aa19.26■□□□□ 0.67
RN7SL127P-201ENST00000494856 OSCARQ8IYS5 282 aa19.25■□□□□ 0.67
RN7SL127P-201ENST00000494856 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
RN7SL127P-201ENST00000494856 ZNF608Q9ULD9 1512 aaPredicted RBP19.15■□□□□ 0.66
RN7SL127P-201ENST00000494856 TOPBP1Q92547 1522 aa19.07■□□□□ 0.64
RN7SL127P-201ENST00000494856 IFT140Q96RY7 1462 aa19.05■□□□□ 0.64
RN7SL127P-201ENST00000494856 AQRO60306 1485 aaKnown RBP eCLIP18.99■□□□□ 0.63
RN7SL127P-201ENST00000494856 FBLN2P98095 1184 aa18.94■□□□□ 0.62
RN7SL127P-201ENST00000494856 DNMBPQ6XZF7 1577 aa18.93■□□□□ 0.62
RN7SL127P-201ENST00000494856 RAD54L2Q9Y4B4 1467 aa18.91■□□□□ 0.62
RN7SL127P-201ENST00000494856 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
RN7SL127P-201ENST00000494856 RIMBP3CA6NJZ7 1639 aa18.91■□□□□ 0.62
RN7SL127P-201ENST00000494856 RIMBP3BA6NNM3 1639 aa18.91■□□□□ 0.62
RN7SL127P-201ENST00000494856 RIMBP3Q9UFD9 1639 aa18.91■□□□□ 0.62
RN7SL127P-201ENST00000494856 EIF4G3O43432 1585 aaKnown RBP18.89■□□□□ 0.62
RN7SL127P-201ENST00000494856 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.61
RN7SL127P-201ENST00000494856 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
RN7SL127P-201ENST00000494856 POLA1P09884 1462 aaPredicted RBP18.88■□□□□ 0.61
RN7SL127P-201ENST00000494856 ARHGEF11O15085 1522 aa18.87■□□□□ 0.61
RN7SL127P-201ENST00000494856 TARBP1Q13395 1621 aaKnown RBP18.85■□□□□ 0.61
RN7SL127P-201ENST00000494856 SOGA1O94964 1423 aa18.83■□□□□ 0.61
RN7SL127P-201ENST00000494856 SUPT5HO00267 1087 aaKnown RBP18.79■□□□□ 0.6
RN7SL127P-201ENST00000494856 FGD5Q6ZNL6 1462 aa18.76■□□□□ 0.59
RN7SL127P-201ENST00000494856 CHD1O14646 1710 aa18.74■□□□□ 0.59
RN7SL127P-201ENST00000494856 CUX1P39880 1505 aa18.74■□□□□ 0.59
RN7SL127P-201ENST00000494856 CHMP7Q8WUX9 453 aaPredicted RBP18.72■□□□□ 0.59
RN7SL127P-201ENST00000494856 SNAPC4Q5SXM2 1469 aa18.71■□□□□ 0.59
RN7SL127P-201ENST00000494856 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
RN7SL127P-201ENST00000494856 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
RN7SL127P-201ENST00000494856 GRIN2BQ13224 1484 aa18.61■□□□□ 0.57
RN7SL127P-201ENST00000494856 GAPVD1Q14C86 1478 aa18.57■□□□□ 0.56
RN7SL127P-201ENST00000494856 MAGI1Q96QZ7 1491 aaPredicted RBP18.57■□□□□ 0.56
RN7SL127P-201ENST00000494856 CLASP1Q7Z460 1538 aa18.56■□□□□ 0.56
RN7SL127P-201ENST00000494856 SYNJ2O15056 1496 aa18.54■□□□□ 0.56
RN7SL127P-201ENST00000494856 SYNJ1O43426 1573 aa18.51■□□□□ 0.55
RN7SL127P-201ENST00000494856 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
RN7SL127P-201ENST00000494856 WDR97A6NE52 1622 aa18.49■□□□□ 0.55
RN7SL127P-201ENST00000494856 WRNQ14191 1432 aaPredicted RBP eCLIP18.43■□□□□ 0.54
RN7SL127P-201ENST00000494856 PBRM1Q86U86 1689 aa18.43■□□□□ 0.54
RN7SL127P-201ENST00000494856 ABCA5Q8WWZ7 1642 aa18.42■□□□□ 0.54
RN7SL127P-201ENST00000494856 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
RN7SL127P-201ENST00000494856 ERCC6L2Q5T890 1561 aa18.4■□□□□ 0.54
RN7SL127P-201ENST00000494856 GRIN2AQ12879 1464 aa18.38■□□□□ 0.53
RN7SL127P-201ENST00000494856 TOP2BQ02880 1626 aa18.35■□□□□ 0.53
RN7SL127P-201ENST00000494856 CEP170Q5SW79 1584 aa18.32■□□□□ 0.52
RN7SL127P-201ENST00000494856 NUP160Q12769 1436 aa18.32■□□□□ 0.52
RN7SL127P-201ENST00000494856 ADAMTS12P58397 1594 aa18.31■□□□□ 0.52
RN7SL127P-201ENST00000494856 FHAD1B1AJZ9 1412 aa18.31■□□□□ 0.52
RN7SL127P-201ENST00000494856 JPH4Q96JJ6 628 aa18.24■□□□□ 0.51
RN7SL127P-201ENST00000494856 PRG4Q92954 1404 aaPredicted RBP18.22■□□□□ 0.51
RN7SL127P-201ENST00000494856 ERICH3Q5RHP9 1530 aa18.21■□□□□ 0.51
RN7SL127P-201ENST00000494856 AEBP2Q6ZN18 517 aaPredicted RBP18.17■□□□□ 0.5
RN7SL127P-201ENST00000494856 SHROOM2Q13796 1616 aa18.16■□□□□ 0.5
RN7SL127P-201ENST00000494856 IGF1RP08069 1367 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms