RNA–Protein interactions for RNA: ENST00000494834.1

AC008040.4-201, humanhuman

BASIC

Gene AC008040.4, Length 768 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008040.4-201ENST00000494834 NISCHQ9Y2I1 1504 aa18.01■□□□□ 0.47
AC008040.4-201ENST00000494834 CCDC180Q9P1Z9 1646 aa16.05■□□□□ 0.16
AC008040.4-201ENST00000494834 ABCC9O60706 1549 aa15.57■□□□□ 0.08
AC008040.4-201ENST00000494834 ZCCHC6Q5VYS8 1495 aaKnown RBP15.04■□□□□ -0
AC008040.4-201ENST00000494834 RB1CC1Q8TDY2 1594 aa15.03■□□□□ -0
AC008040.4-201ENST00000494834 NACADO15069 1562 aa15.02■□□□□ -0
AC008040.4-201ENST00000494834 MYO15BQ96JP2 1530 aa14.95□□□□□ -0.02
AC008040.4-201ENST00000494834 DCAF8L2P0C7V8 631 aa14.92□□□□□ -0.02
AC008040.4-201ENST00000494834 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
AC008040.4-201ENST00000494834 UNC13AQ9UPW8 1703 aa14.8□□□□□ -0.04
AC008040.4-201ENST00000494834 SCRIBQ14160 1630 aa14.63□□□□□ -0.07
AC008040.4-201ENST00000494834 BICRAQ9NZM4 1560 aa14.59□□□□□ -0.07
AC008040.4-201ENST00000494834 PABPN1Q86U42 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
AC008040.4-201ENST00000494834 SHROOM4Q9ULL8 1493 aa14.43□□□□□ -0.1
AC008040.4-201ENST00000494834 EIF4G1Q04637 1599 aaKnown RBP14.2□□□□□ -0.14
AC008040.4-201ENST00000494834 DNAJC5BQ9UF47 199 aa14.18□□□□□ -0.14
AC008040.4-201ENST00000494834 CC2D2AQ9P2K1 1620 aa14.12□□□□□ -0.15
AC008040.4-201ENST00000494834 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
AC008040.4-201ENST00000494834 SMARCA4P51532 1647 aa14□□□□□ -0.17
AC008040.4-201ENST00000494834 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
AC008040.4-201ENST00000494834 MROH2BQ7Z745 1585 aa13.88□□□□□ -0.19
AC008040.4-201ENST00000494834 SMARCA2P51531 1590 aa13.86□□□□□ -0.19
AC008040.4-201ENST00000494834 PEG3Q9GZU2 1588 aa13.86□□□□□ -0.19
AC008040.4-201ENST00000494834 ATAD2BQ9ULI0 1458 aa13.86□□□□□ -0.19
AC008040.4-201ENST00000494834 NCAPD3P42695 1498 aa13.82□□□□□ -0.2
AC008040.4-201ENST00000494834 HMGXB3Q12766 1538 aa13.82□□□□□ -0.2
AC008040.4-201ENST00000494834 WIZO95785 1651 aa13.78□□□□□ -0.2
AC008040.4-201ENST00000494834 BAZ1BQ9UIG0 1483 aaKnown RBP13.76□□□□□ -0.21
AC008040.4-201ENST00000494834 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
AC008040.4-201ENST00000494834 CHIC1Q5VXU3 224 aa13.71□□□□□ -0.21
AC008040.4-201ENST00000494834 TOP2AP11388 1531 aaKnown RBP13.62□□□□□ -0.23
AC008040.4-201ENST00000494834 NESP48681 1621 aa13.5□□□□□ -0.25
AC008040.4-201ENST00000494834 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
AC008040.4-201ENST00000494834 KIF21AQ7Z4S6 1674 aa13.42□□□□□ -0.26
AC008040.4-201ENST00000494834 CADPSQ9ULU8 1353 aa13.42□□□□□ -0.26
AC008040.4-201ENST00000494834 CCDC88BA6NC98 1476 aa13.42□□□□□ -0.26
AC008040.4-201ENST00000494834 PRDM2Q13029 1718 aa13.42□□□□□ -0.26
AC008040.4-201ENST00000494834 ERCC6Q03468 1493 aa13.41□□□□□ -0.26
AC008040.4-201ENST00000494834 SUPT5HO00267 1087 aaKnown RBP13.38□□□□□ -0.27
AC008040.4-201ENST00000494834 CFTRP13569 1480 aa13.37□□□□□ -0.27
AC008040.4-201ENST00000494834 AEBP2Q6ZN18 517 aaPredicted RBP13.35□□□□□ -0.27
AC008040.4-201ENST00000494834 PDS5BQ9NTI5 1447 aa13.35□□□□□ -0.27
AC008040.4-201ENST00000494834 THOC2Q8NI27 1593 aaKnown RBP13.34□□□□□ -0.27
AC008040.4-201ENST00000494834 FANCD2Q9BXW9 1451 aa13.29□□□□□ -0.28
AC008040.4-201ENST00000494834 CEP164Q9UPV0 1460 aa13.28□□□□□ -0.28
AC008040.4-201ENST00000494834 CUX2O14529 1486 aa13.25□□□□□ -0.29
AC008040.4-201ENST00000494834 MRC2Q9UBG0 1479 aa13.24□□□□□ -0.29
AC008040.4-201ENST00000494834 WDR62O43379 1518 aa13.22□□□□□ -0.29
AC008040.4-201ENST00000494834 URB2Q14146 1524 aaKnown RBP13.17□□□□□ -0.3
AC008040.4-201ENST00000494834 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
AC008040.4-201ENST00000494834 TOPBP1Q92547 1522 aa13.1□□□□□ -0.31
AC008040.4-201ENST00000494834 ABCC8Q09428 1581 aa13.07□□□□□ -0.32
AC008040.4-201ENST00000494834 CUX1P39880 1505 aa13.03□□□□□ -0.32
AC008040.4-201ENST00000494834 POLA1P09884 1462 aaPredicted RBP12.99□□□□□ -0.33
AC008040.4-201ENST00000494834 IFT140Q96RY7 1462 aa12.98□□□□□ -0.33
AC008040.4-201ENST00000494834 BIVM-ERCC5R4GMW8 1640 aa12.98□□□□□ -0.33
AC008040.4-201ENST00000494834 FGD5Q6ZNL6 1462 aa12.97□□□□□ -0.33
AC008040.4-201ENST00000494834 TARBP1Q13395 1621 aaKnown RBP12.97□□□□□ -0.33
AC008040.4-201ENST00000494834 SYNJ1O43426 1573 aa12.96□□□□□ -0.33
AC008040.4-201ENST00000494834 TOP2BQ02880 1626 aa12.95□□□□□ -0.34
AC008040.4-201ENST00000494834 WRNQ14191 1432 aaPredicted RBP eCLIP12.95□□□□□ -0.34
AC008040.4-201ENST00000494834 WDR97A6NE52 1622 aa12.94□□□□□ -0.34
AC008040.4-201ENST00000494834 EIF4G3O43432 1585 aaKnown RBP12.94□□□□□ -0.34
AC008040.4-201ENST00000494834 ZNF608Q9ULD9 1512 aaPredicted RBP12.93□□□□□ -0.34
AC008040.4-201ENST00000494834 RAD54L2Q9Y4B4 1467 aa12.92□□□□□ -0.34
AC008040.4-201ENST00000494834 SOGA1O94964 1423 aa12.89□□□□□ -0.35
AC008040.4-201ENST00000494834 ABCA10Q8WWZ4 1543 aa12.84□□□□□ -0.35
AC008040.4-201ENST00000494834 PBRM1Q86U86 1689 aa12.84□□□□□ -0.35
AC008040.4-201ENST00000494834 AQRO60306 1485 aaKnown RBP eCLIP12.84□□□□□ -0.35
AC008040.4-201ENST00000494834 ABCA5Q8WWZ7 1642 aa12.83□□□□□ -0.36
AC008040.4-201ENST00000494834 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
AC008040.4-201ENST00000494834 CHD1O14646 1710 aa12.79□□□□□ -0.36
AC008040.4-201ENST00000494834 GAPVD1Q14C86 1478 aa12.77□□□□□ -0.37
AC008040.4-201ENST00000494834 GRIN2BQ13224 1484 aa12.76□□□□□ -0.37
AC008040.4-201ENST00000494834 SNAPC4Q5SXM2 1469 aa12.76□□□□□ -0.37
AC008040.4-201ENST00000494834 MAGI1Q96QZ7 1491 aaPredicted RBP12.74□□□□□ -0.37
AC008040.4-201ENST00000494834 ADAMTS12P58397 1594 aa12.71□□□□□ -0.37
AC008040.4-201ENST00000494834 DNAJC5Q9H3Z4 198 aa12.7□□□□□ -0.38
AC008040.4-201ENST00000494834 ERICH3Q5RHP9 1530 aa12.7□□□□□ -0.38
AC008040.4-201ENST00000494834 SYNJ2O15056 1496 aa12.68□□□□□ -0.38
AC008040.4-201ENST00000494834 KIF27Q86VH2 1401 aa12.66□□□□□ -0.38
AC008040.4-201ENST00000494834 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
AC008040.4-201ENST00000494834 CUL7Q14999 1698 aa12.64□□□□□ -0.39
AC008040.4-201ENST00000494834 FBLN2P98095 1184 aa12.63□□□□□ -0.39
AC008040.4-201ENST00000494834 TRIM41Q8WV44 630 aa12.63□□□□□ -0.39
AC008040.4-201ENST00000494834 FHAD1B1AJZ9 1412 aa12.62□□□□□ -0.39
AC008040.4-201ENST00000494834 GRIN2AQ12879 1464 aa12.62□□□□□ -0.39
AC008040.4-201ENST00000494834 CHMP7Q8WUX9 453 aaPredicted RBP12.61□□□□□ -0.39
AC008040.4-201ENST00000494834 CLASP1Q7Z460 1538 aa12.61□□□□□ -0.39
AC008040.4-201ENST00000494834 RUSC2Q8N2Y8 1516 aa12.58□□□□□ -0.4
AC008040.4-201ENST00000494834 CEP170Q5SW79 1584 aa12.58□□□□□ -0.4
AC008040.4-201ENST00000494834 IGF1RP08069 1367 aa12.57□□□□□ -0.4
AC008040.4-201ENST00000494834 NUP160Q12769 1436 aa12.55□□□□□ -0.4
AC008040.4-201ENST00000494834 RIMBP3CA6NJZ7 1639 aa12.55□□□□□ -0.4
AC008040.4-201ENST00000494834 RIMBP3BA6NNM3 1639 aa12.55□□□□□ -0.4
AC008040.4-201ENST00000494834 RIMBP3Q9UFD9 1639 aa12.55□□□□□ -0.4
AC008040.4-201ENST00000494834 ARHGEF11O15085 1522 aa12.52□□□□□ -0.4
AC008040.4-201ENST00000494834 CARMIL1Q5VZK9 1371 aa12.51□□□□□ -0.41
AC008040.4-201ENST00000494834 SHROOM2Q13796 1616 aa12.49□□□□□ -0.41
AC008040.4-201ENST00000494834 RAPGEF2Q9Y4G8 1499 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms