RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 NISCHQ9Y2I1 1504 aa26.64■■□□□ 1.85
SCRN1-209ENST00000494620 CCDC180Q9P1Z9 1646 aa23.67■■□□□ 1.38
SCRN1-209ENST00000494620 ABCC9O60706 1549 aa23.52■■□□□ 1.36
SCRN1-209ENST00000494620 DCAF8L2P0C7V8 631 aa22.66■■□□□ 1.22
SCRN1-209ENST00000494620 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
SCRN1-209ENST00000494620 NACADO15069 1562 aa22.43■■□□□ 1.18
SCRN1-209ENST00000494620 MYO15BQ96JP2 1530 aa22.21■■□□□ 1.15
SCRN1-209ENST00000494620 DNAJC5BQ9UF47 199 aa22.16■■□□□ 1.14
SCRN1-209ENST00000494620 ZCCHC6Q5VYS8 1495 aaKnown RBP22.09■■□□□ 1.13
SCRN1-209ENST00000494620 PABPN1Q86U42 306 aaKnown RBP eCLIP22.05■■□□□ 1.12
SCRN1-209ENST00000494620 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
SCRN1-209ENST00000494620 UNC13AQ9UPW8 1703 aa21.74■■□□□ 1.07
SCRN1-209ENST00000494620 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
SCRN1-209ENST00000494620 SCRIBQ14160 1630 aa21.62■■□□□ 1.05
SCRN1-209ENST00000494620 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.04
SCRN1-209ENST00000494620 EIF4G1Q04637 1599 aaKnown RBP21.22■□□□□ 0.99
SCRN1-209ENST00000494620 CECR2Q9BXF3 1484 aa21.18■□□□□ 0.98
SCRN1-209ENST00000494620 CC2D2AQ9P2K1 1620 aa21.18■□□□□ 0.98
SCRN1-209ENST00000494620 NCAPD3P42695 1498 aa20.74■□□□□ 0.91
SCRN1-209ENST00000494620 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
SCRN1-209ENST00000494620 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
SCRN1-209ENST00000494620 SMARCA2P51531 1590 aa20.66■□□□□ 0.9
SCRN1-209ENST00000494620 SMARCA4P51532 1647 aa20.65■□□□□ 0.9
SCRN1-209ENST00000494620 DNAJC5Q9H3Z4 198 aa20.62■□□□□ 0.89
SCRN1-209ENST00000494620 BAZ1BQ9UIG0 1483 aaKnown RBP20.53■□□□□ 0.88
SCRN1-209ENST00000494620 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
SCRN1-209ENST00000494620 MROH2BQ7Z745 1585 aa20.5■□□□□ 0.87
SCRN1-209ENST00000494620 PEG3Q9GZU2 1588 aa20.45■□□□□ 0.86
SCRN1-209ENST00000494620 ERCC6Q03468 1493 aa20.37■□□□□ 0.85
SCRN1-209ENST00000494620 RSF1Q96T23 1441 aaPredicted RBP20.26■□□□□ 0.83
SCRN1-209ENST00000494620 CUX2O14529 1486 aa20.24■□□□□ 0.83
SCRN1-209ENST00000494620 NESP48681 1621 aa20.23■□□□□ 0.83
SCRN1-209ENST00000494620 WIZO95785 1651 aa20.22■□□□□ 0.83
SCRN1-209ENST00000494620 PDS5BQ9NTI5 1447 aa20.19■□□□□ 0.82
SCRN1-209ENST00000494620 CADPSQ9ULU8 1353 aa20.18■□□□□ 0.82
SCRN1-209ENST00000494620 LAMC3Q9Y6N6 1575 aa20.17■□□□□ 0.82
SCRN1-209ENST00000494620 TOP2AP11388 1531 aaKnown RBP20.04■□□□□ 0.8
SCRN1-209ENST00000494620 CFTRP13569 1480 aa19.93■□□□□ 0.78
SCRN1-209ENST00000494620 MRC2Q9UBG0 1479 aa19.89■□□□□ 0.77
SCRN1-209ENST00000494620 FANCD2Q9BXW9 1451 aa19.88■□□□□ 0.77
SCRN1-209ENST00000494620 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
SCRN1-209ENST00000494620 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
SCRN1-209ENST00000494620 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
SCRN1-209ENST00000494620 THOC2Q8NI27 1593 aaKnown RBP19.86■□□□□ 0.77
SCRN1-209ENST00000494620 SUPT5HO00267 1087 aaKnown RBP19.77■□□□□ 0.76
SCRN1-209ENST00000494620 WDR62O43379 1518 aa19.75■□□□□ 0.75
SCRN1-209ENST00000494620 URB2Q14146 1524 aaKnown RBP19.62■□□□□ 0.73
SCRN1-209ENST00000494620 ABCC8Q09428 1581 aa19.61■□□□□ 0.73
SCRN1-209ENST00000494620 PRDM2Q13029 1718 aa19.55■□□□□ 0.72
SCRN1-209ENST00000494620 TRIM41Q8WV44 630 aa19.52■□□□□ 0.72
SCRN1-209ENST00000494620 IFT140Q96RY7 1462 aa19.5■□□□□ 0.71
SCRN1-209ENST00000494620 TOPBP1Q92547 1522 aa19.5■□□□□ 0.71
SCRN1-209ENST00000494620 OSCARQ8IYS5 282 aa19.48■□□□□ 0.71
SCRN1-209ENST00000494620 DNMBPQ6XZF7 1577 aa19.44■□□□□ 0.7
SCRN1-209ENST00000494620 SOGA1O94964 1423 aa19.35■□□□□ 0.69
SCRN1-209ENST00000494620 ZNF608Q9ULD9 1512 aaPredicted RBP19.35■□□□□ 0.69
SCRN1-209ENST00000494620 POLA1P09884 1462 aaPredicted RBP19.32■□□□□ 0.68
SCRN1-209ENST00000494620 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.68
SCRN1-209ENST00000494620 FBLN2P98095 1184 aa19.28■□□□□ 0.68
SCRN1-209ENST00000494620 TDRD9Q8NDG6 1382 aaKnown RBP19.26■□□□□ 0.67
SCRN1-209ENST00000494620 FGD5Q6ZNL6 1462 aa19.26■□□□□ 0.67
SCRN1-209ENST00000494620 RAD54L2Q9Y4B4 1467 aa19.26■□□□□ 0.67
SCRN1-209ENST00000494620 CUX1P39880 1505 aa19.23■□□□□ 0.67
SCRN1-209ENST00000494620 TARBP1Q13395 1621 aaKnown RBP19.22■□□□□ 0.67
SCRN1-209ENST00000494620 CHMP7Q8WUX9 453 aaPredicted RBP19.19■□□□□ 0.66
SCRN1-209ENST00000494620 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
SCRN1-209ENST00000494620 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
SCRN1-209ENST00000494620 WDR97A6NE52 1622 aa19.11■□□□□ 0.65
SCRN1-209ENST00000494620 GRIN2BQ13224 1484 aa19.11■□□□□ 0.65
SCRN1-209ENST00000494620 GAPVD1Q14C86 1478 aa19.08■□□□□ 0.64
SCRN1-209ENST00000494620 SNAPC4Q5SXM2 1469 aa19.06■□□□□ 0.64
SCRN1-209ENST00000494620 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
SCRN1-209ENST00000494620 MAGI1Q96QZ7 1491 aaPredicted RBP19.05■□□□□ 0.64
SCRN1-209ENST00000494620 RIMBP3CA6NJZ7 1639 aa19.05■□□□□ 0.64
SCRN1-209ENST00000494620 RIMBP3BA6NNM3 1639 aa19.05■□□□□ 0.64
SCRN1-209ENST00000494620 RIMBP3Q9UFD9 1639 aa19.05■□□□□ 0.64
SCRN1-209ENST00000494620 TOP2BQ02880 1626 aa19.01■□□□□ 0.63
SCRN1-209ENST00000494620 SYNJ2O15056 1496 aa18.99■□□□□ 0.63
SCRN1-209ENST00000494620 CYB5RLQ6IPT4 315 aa18.98■□□□□ 0.63
SCRN1-209ENST00000494620 SYNJ1O43426 1573 aa18.95■□□□□ 0.62
SCRN1-209ENST00000494620 BIVM-ERCC5R4GMW8 1640 aa18.95■□□□□ 0.62
SCRN1-209ENST00000494620 CHD1O14646 1710 aa18.94■□□□□ 0.62
SCRN1-209ENST00000494620 ARHGEF11O15085 1522 aa18.93■□□□□ 0.62
SCRN1-209ENST00000494620 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.61
SCRN1-209ENST00000494620 FHAD1B1AJZ9 1412 aa18.87■□□□□ 0.61
SCRN1-209ENST00000494620 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
SCRN1-209ENST00000494620 ERICH3Q5RHP9 1530 aa18.83■□□□□ 0.6
SCRN1-209ENST00000494620 KIF27Q86VH2 1401 aa18.82■□□□□ 0.6
SCRN1-209ENST00000494620 GRIN2AQ12879 1464 aa18.81■□□□□ 0.6
SCRN1-209ENST00000494620 CLASP1Q7Z460 1538 aa18.79■□□□□ 0.6
SCRN1-209ENST00000494620 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
SCRN1-209ENST00000494620 ADAMTS12P58397 1594 aa18.74■□□□□ 0.59
SCRN1-209ENST00000494620 IGF1RP08069 1367 aa18.74■□□□□ 0.59
SCRN1-209ENST00000494620 NUP160Q12769 1436 aa18.74■□□□□ 0.59
SCRN1-209ENST00000494620 TRHP20396 242 aaPredicted RBP18.73■□□□□ 0.59
SCRN1-209ENST00000494620 JPH4Q96JJ6 628 aa18.72■□□□□ 0.59
SCRN1-209ENST00000494620 CARMIL1Q5VZK9 1371 aa18.67■□□□□ 0.58
SCRN1-209ENST00000494620 CEP170Q5SW79 1584 aa18.64■□□□□ 0.57
SCRN1-209ENST00000494620 PRG4Q92954 1404 aaPredicted RBP18.61■□□□□ 0.57
SCRN1-209ENST00000494620 CUL7Q14999 1698 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms