RNA–Protein interactions for RNA: ENST00000494516.6

GATAD2A-212, Transcript of GATA zinc finger domain containing 2A, humanhuman

TSL 2

Gene GATAD2A, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATAD2A-212ENST00000494516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.63■■□□□ 1.051e-7■■■■■ 128.4
GATAD2A-212ENST00000494516 SF3B1O75533 1304 aaKnown RBP eCLIP22.24■■□□□ 1.159e-6■■■■■ 68.9
GATAD2A-212ENST00000494516 MATR3P43243 847 aaKnown RBP eCLIP22.16■■□□□ 1.143e-7■■■■■ 61.2
GATAD2A-212ENST00000494516 PCBP2Q15366 365 aaKnown RBP eCLIP18.99■□□□□ 0.632e-6■■■■■ 57
GATAD2A-212ENST00000494516 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.14■□□□□ 0.653e-10■■■■■ 54.6
GATAD2A-212ENST00000494516 GTF2F1P35269 517 aaKnown RBP eCLIP22.59■■□□□ 1.212e-13■■■■■ 43.6
GATAD2A-212ENST00000494516 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.73■■□□□ 1.551e-7■■■■■ 36.7
GATAD2A-212ENST00000494516 PCBP1Q15365 356 aaKnown RBP eCLIP22.52■■□□□ 1.21e-10■■■■■ 32.8
GATAD2A-212ENST00000494516 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20■□□□□ 0.791e-18■■■■■ 32.8
GATAD2A-212ENST00000494516 PTBP1P26599 531 aaKnown RBP eCLIP15.37■□□□□ 0.054e-7■■■■■ 27
GATAD2A-212ENST00000494516 WRNQ14191 1432 aaPredicted RBP eCLIP35.93■■■■□ 3.341e-6■■■■□ 26.6
GATAD2A-212ENST00000494516 TARDBPQ13148 414 aaKnown RBP eCLIP20.34■□□□□ 0.859e-9■■■■□ 25.6
GATAD2A-212ENST00000494516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.03■□□□□ 0.963e-6■■■■□ 23.1
GATAD2A-212ENST00000494516 HNRNPMP52272 730 aaKnown RBP eCLIP32.29■■■□□ 2.765e-7■■■■□ 22.8
GATAD2A-212ENST00000494516 DKC1O60832 514 aaKnown RBP eCLIP22.74■■□□□ 1.237e-13■■■■□ 22.2
GATAD2A-212ENST00000494516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.59■■■□□ 2.172e-6■■■■□ 21.1
GATAD2A-212ENST00000494516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.17■■■□□ 2.96e-9■■■■□ 20.6
GATAD2A-212ENST00000494516 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.99■□□□□ 0.952e-6■■■■□ 20.5
GATAD2A-212ENST00000494516 TAF15Q92804 592 aaKnown RBP eCLIP16.72■□□□□ 0.276e-6■■■■□ 19.7
GATAD2A-212ENST00000494516 EIF4G2P78344 907 aaKnown RBP eCLIP28.29■■■□□ 2.127e-13■■■□□ 19.1
GATAD2A-212ENST00000494516 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.16■■□□□ 1.467e-8■■■□□ 18.9
GATAD2A-212ENST00000494516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.28■■■□□ 2.65e-8■■■□□ 18
GATAD2A-212ENST00000494516 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.99■■□□□ 1.114e-8■■■□□ 17
GATAD2A-212ENST00000494516 NONOQ15233 471 aaKnown RBP eCLIP22.99■■□□□ 1.271e-6■■■□□ 16.6
GATAD2A-212ENST00000494516 RBFOX2O43251 390 aaKnown RBP eCLIP15.54■□□□□ 0.082e-7■■■□□ 16.5
GATAD2A-212ENST00000494516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.6■□□□□ 0.896e-8■■■□□ 16.1
GATAD2A-212ENST00000494516 U2AF2P26368 475 aaKnown RBP eCLIP22.68■■□□□ 1.224e-10■■■□□ 15.6
GATAD2A-212ENST00000494516 SFPQP23246 707 aaKnown RBP eCLIP22.65■■□□□ 1.222e-6■■■□□ 15.5
GATAD2A-212ENST00000494516 DDX3XO00571 662 aaKnown RBP eCLIP20.77■□□□□ 0.922e-7■■■□□ 15.3
GATAD2A-212ENST00000494516 PRPF4O43172 522 aaKnown RBP eCLIP19.26■□□□□ 0.672e-7■■□□□ 14.3
GATAD2A-212ENST00000494516 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.02■□□□□ 0.641e-6■■□□□ 13.9
GATAD2A-212ENST00000494516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.22■■■□□ 2.591e-6■■□□□ 13.7
GATAD2A-212ENST00000494516 ILF3Q12906 894 aaKnown RBP eCLIP20.17■□□□□ 0.821e-7■■□□□ 13.2
GATAD2A-212ENST00000494516 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.43■□□□□ 0.381e-8■□□□□ 10.6
GATAD2A-212ENST00000494516 FXR2P51116 673 aaKnown RBP eCLIP22.6■■□□□ 1.218e-6■□□□□ 10.6
GATAD2A-212ENST00000494516 EWSR1Q01844 656 aaKnown RBP eCLIP14.93□□□□□ -0.025e-7■□□□□ 10.6
GATAD2A-212ENST00000494516 METAP2P50579 478 aaKnown RBP eCLIP23.33■■□□□ 1.332e-8■□□□□ 10.5
GATAD2A-212ENST00000494516 HNRNPCP07910 306 aaKnown RBP eCLIP14.93□□□□□ -0.021e-6■□□□□ 10.4
GATAD2A-212ENST00000494516 NKRFO15226 690 aaKnown RBP eCLIP23.52■■□□□ 1.361e-7■□□□□ 10.3
GATAD2A-212ENST00000494516 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.78■□□□□ 0.64e-15■□□□□ 10.3
GATAD2A-212ENST00000494516 NOLC1Q14978 699 aaKnown RBP eCLIP22.23■■□□□ 1.153e-6■□□□□ 10.3
GATAD2A-212ENST00000494516 YBX3P16989 372 aaKnown RBP eCLIP27■■□□□ 1.914e-6■□□□□ 9.7
GATAD2A-212ENST00000494516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.69■■■□□ 2.029e-9■□□□□ 9.1
GATAD2A-212ENST00000494516 NCBP2P52298 156 aaKnown RBP eCLIP18.56■□□□□ 0.569e-6■□□□□ 8.4
Retrieved 44 of 44 RNA–protein pairs in 11.2 ms