RNA–Protein interactions for RNA: ENST00000494179.5

MRPL38-215, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 3

Gene MRPL38, Length 870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-215ENST00000494179 NISCHQ9Y2I1 1504 aa41.62■■■■■ 4.25
MRPL38-215ENST00000494179 ABCC9O60706 1549 aa37.56■■■■□ 3.6
MRPL38-215ENST00000494179 CCDC180Q9P1Z9 1646 aa37.5■■■■□ 3.59
MRPL38-215ENST00000494179 RB1CC1Q8TDY2 1594 aa35.71■■■■□ 3.31
MRPL38-215ENST00000494179 NACADO15069 1562 aa35.41■■■■□ 3.26
MRPL38-215ENST00000494179 DNAJC5BQ9UF47 199 aa35.22■■■■□ 3.23
MRPL38-215ENST00000494179 DCAF8L2P0C7V8 631 aa35.12■■■■□ 3.21
MRPL38-215ENST00000494179 UNC13AQ9UPW8 1703 aa35.01■■■■□ 3.2
MRPL38-215ENST00000494179 PABPN1Q86U42 306 aaKnown RBP eCLIP34.87■■■■□ 3.17
MRPL38-215ENST00000494179 MYO15BQ96JP2 1530 aa34.84■■■■□ 3.17
MRPL38-215ENST00000494179 BICRAQ9NZM4 1560 aa34.66■■■■□ 3.14
MRPL38-215ENST00000494179 ZCCHC6Q5VYS8 1495 aaKnown RBP34.5■■■■□ 3.11
MRPL38-215ENST00000494179 DCAF1Q9Y4B6 1507 aa34.35■■■■□ 3.09
MRPL38-215ENST00000494179 SHROOM4Q9ULL8 1493 aa34.18■■■■□ 3.06
MRPL38-215ENST00000494179 SCRIBQ14160 1630 aa34.18■■■■□ 3.06
MRPL38-215ENST00000494179 CC2D2AQ9P2K1 1620 aa33.95■■■■□ 3.03
MRPL38-215ENST00000494179 EIF4G1Q04637 1599 aaKnown RBP33.85■■■■□ 3.01
MRPL38-215ENST00000494179 CECR2Q9BXF3 1484 aa33.83■■■■□ 3.01
MRPL38-215ENST00000494179 NCAPD3P42695 1498 aa32.62■■■□□ 2.81
MRPL38-215ENST00000494179 SMARCA4P51532 1647 aa32.56■■■□□ 2.8
MRPL38-215ENST00000494179 ATAD2BQ9ULI0 1458 aa32.54■■■□□ 2.8
MRPL38-215ENST00000494179 SMARCA2P51531 1590 aa32.49■■■□□ 2.79
MRPL38-215ENST00000494179 HMGXB3Q12766 1538 aa32.46■■■□□ 2.79
MRPL38-215ENST00000494179 ERCC6Q03468 1493 aa32.46■■■□□ 2.79
MRPL38-215ENST00000494179 DNAJC5Q9H3Z4 198 aa32.42■■■□□ 2.78
MRPL38-215ENST00000494179 CUX2O14529 1486 aa32.42■■■□□ 2.78
MRPL38-215ENST00000494179 BAZ1AQ9NRL2 1556 aaPredicted RBP32.34■■■□□ 2.77
MRPL38-215ENST00000494179 BAZ1BQ9UIG0 1483 aaKnown RBP32.27■■■□□ 2.76
MRPL38-215ENST00000494179 NESP48681 1621 aa32.22■■■□□ 2.75
MRPL38-215ENST00000494179 PEG3Q9GZU2 1588 aa32.19■■■□□ 2.74
MRPL38-215ENST00000494179 MROH2BQ7Z745 1585 aa32.08■■■□□ 2.73
MRPL38-215ENST00000494179 LAMC3Q9Y6N6 1575 aa32■■■□□ 2.71
MRPL38-215ENST00000494179 THOC2Q8NI27 1593 aaKnown RBP31.99■■■□□ 2.71
MRPL38-215ENST00000494179 KIF21AQ7Z4S6 1674 aa31.91■■■□□ 2.7
MRPL38-215ENST00000494179 PDS5BQ9NTI5 1447 aa31.75■■■□□ 2.67
MRPL38-215ENST00000494179 WIZO95785 1651 aa31.74■■■□□ 2.67
MRPL38-215ENST00000494179 CADPSQ9ULU8 1353 aa31.62■■■□□ 2.65
MRPL38-215ENST00000494179 MRC2Q9UBG0 1479 aa31.54■■■□□ 2.64
MRPL38-215ENST00000494179 WDR62O43379 1518 aa31.49■■■□□ 2.63
MRPL38-215ENST00000494179 CEP164Q9UPV0 1460 aa31.4■■■□□ 2.62
MRPL38-215ENST00000494179 FANCD2Q9BXW9 1451 aa31.33■■■□□ 2.61
MRPL38-215ENST00000494179 RSF1Q96T23 1441 aaPredicted RBP31.32■■■□□ 2.61
MRPL38-215ENST00000494179 TOP2AP11388 1531 aaKnown RBP31.32■■■□□ 2.6
MRPL38-215ENST00000494179 CFTRP13569 1480 aa31.27■■■□□ 2.6
MRPL38-215ENST00000494179 PRDM2Q13029 1718 aa31.13■■■□□ 2.57
MRPL38-215ENST00000494179 URB2Q14146 1524 aaKnown RBP31.08■■■□□ 2.57
MRPL38-215ENST00000494179 TRIM41Q8WV44 630 aa31.04■■■□□ 2.56
MRPL38-215ENST00000494179 CCDC88BA6NC98 1476 aa30.89■■■□□ 2.54
MRPL38-215ENST00000494179 OSCARQ8IYS5 282 aa30.81■■■□□ 2.52
MRPL38-215ENST00000494179 IFT140Q96RY7 1462 aa30.75■■■□□ 2.51
MRPL38-215ENST00000494179 TOPBP1Q92547 1522 aa30.73■■■□□ 2.51
MRPL38-215ENST00000494179 ZNF608Q9ULD9 1512 aaPredicted RBP30.73■■■□□ 2.51
MRPL38-215ENST00000494179 DNMBPQ6XZF7 1577 aa30.64■■■□□ 2.5
MRPL38-215ENST00000494179 EIF4G3O43432 1585 aaKnown RBP30.63■■■□□ 2.49
MRPL38-215ENST00000494179 ABCC8Q09428 1581 aa30.62■■■□□ 2.49
MRPL38-215ENST00000494179 RIMBP3CA6NJZ7 1639 aa30.58■■■□□ 2.49
MRPL38-215ENST00000494179 RIMBP3BA6NNM3 1639 aa30.58■■■□□ 2.49
MRPL38-215ENST00000494179 RIMBP3Q9UFD9 1639 aa30.58■■■□□ 2.49
MRPL38-215ENST00000494179 TARBP1Q13395 1621 aaKnown RBP30.49■■■□□ 2.47
MRPL38-215ENST00000494179 CHD1O14646 1710 aa30.46■■■□□ 2.47
MRPL38-215ENST00000494179 ARHGEF11O15085 1522 aa30.43■■■□□ 2.46
MRPL38-215ENST00000494179 POLA1P09884 1462 aaPredicted RBP30.41■■■□□ 2.46
MRPL38-215ENST00000494179 AQRO60306 1485 aaKnown RBP eCLIP30.39■■■□□ 2.461e-6■■□□□ 12.5
MRPL38-215ENST00000494179 RAD54L2Q9Y4B4 1467 aa30.28■■■□□ 2.44
MRPL38-215ENST00000494179 FGD5Q6ZNL6 1462 aa30.21■■■□□ 2.43
MRPL38-215ENST00000494179 FBLN2P98095 1184 aa30.21■■■□□ 2.43
MRPL38-215ENST00000494179 SOGA1O94964 1423 aa30.21■■■□□ 2.43
MRPL38-215ENST00000494179 WDR97A6NE52 1622 aa30.18■■■□□ 2.42
MRPL38-215ENST00000494179 TDRD9Q8NDG6 1382 aaKnown RBP30.17■■■□□ 2.42
MRPL38-215ENST00000494179 CUX1P39880 1505 aa30.17■■■□□ 2.42
MRPL38-215ENST00000494179 SNAPC4Q5SXM2 1469 aa30.15■■■□□ 2.42
MRPL38-215ENST00000494179 ARAP1Q96P48 1450 aa30.13■■■□□ 2.41
MRPL38-215ENST00000494179 CYB5RLQ6IPT4 315 aa30.12■■■□□ 2.41
MRPL38-215ENST00000494179 MAGI1Q96QZ7 1491 aaPredicted RBP30.04■■■□□ 2.4
MRPL38-215ENST00000494179 CLASP1Q7Z460 1538 aa30.02■■■□□ 2.4
MRPL38-215ENST00000494179 PBRM1Q86U86 1689 aa30.01■■■□□ 2.4
MRPL38-215ENST00000494179 SYNJ1O43426 1573 aa30.01■■■□□ 2.39
MRPL38-215ENST00000494179 GRIN2BQ13224 1484 aa30■■■□□ 2.39
MRPL38-215ENST00000494179 CHMP7Q8WUX9 453 aaPredicted RBP29.95■■■□□ 2.39
MRPL38-215ENST00000494179 SUPT5HO00267 1087 aaKnown RBP29.94■■■□□ 2.38
MRPL38-215ENST00000494179 SYNJ2O15056 1496 aa29.93■■■□□ 2.38
MRPL38-215ENST00000494179 GAPVD1Q14C86 1478 aa29.88■■■□□ 2.37
MRPL38-215ENST00000494179 ABCA5Q8WWZ7 1642 aa29.88■■■□□ 2.37
MRPL38-215ENST00000494179 TRHP20396 242 aaPredicted RBP29.86■■■□□ 2.37
MRPL38-215ENST00000494179 ABCA10Q8WWZ4 1543 aa29.84■■■□□ 2.37
MRPL38-215ENST00000494179 BIVM-ERCC5R4GMW8 1640 aa29.7■■■□□ 2.34
MRPL38-215ENST00000494179 ADAMTS12P58397 1594 aa29.68■■■□□ 2.34
MRPL38-215ENST00000494179 TOP2BQ02880 1626 aa29.67■■■□□ 2.34
MRPL38-215ENST00000494179 WRNQ14191 1432 aaPredicted RBP eCLIP29.66■■■□□ 2.34
MRPL38-215ENST00000494179 GRIN2AQ12879 1464 aa29.64■■■□□ 2.34
MRPL38-215ENST00000494179 CEP170Q5SW79 1584 aa29.57■■■□□ 2.32
MRPL38-215ENST00000494179 ERCC6L2Q5T890 1561 aa29.56■■■□□ 2.32
MRPL38-215ENST00000494179 NUP160Q12769 1436 aa29.52■■■□□ 2.32
MRPL38-215ENST00000494179 FHAD1B1AJZ9 1412 aa29.48■■■□□ 2.31
MRPL38-215ENST00000494179 ERICH3Q5RHP9 1530 aa29.47■■■□□ 2.31
MRPL38-215ENST00000494179 SHROOM2Q13796 1616 aa29.46■■■□□ 2.31
MRPL38-215ENST00000494179 RUSC2Q8N2Y8 1516 aa29.27■■■□□ 2.28
MRPL38-215ENST00000494179 PRG4Q92954 1404 aaPredicted RBP29.23■■■□□ 2.27
MRPL38-215ENST00000494179 KIF13AQ9H1H9 1805 aa29.19■■■□□ 2.26
MRPL38-215ENST00000494179 JPH4Q96JJ6 628 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms