RNA–Protein interactions for RNA: ENST00000493762.1

AC008040.3-201, humanhuman

BASIC

Gene AC008040.3, Length 1,232 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008040.3-201ENST00000493762 NISCHQ9Y2I1 1504 aa29.88■■■□□ 2.37
AC008040.3-201ENST00000493762 CCDC180Q9P1Z9 1646 aa26.67■■□□□ 1.86
AC008040.3-201ENST00000493762 ABCC9O60706 1549 aa26.12■■□□□ 1.77
AC008040.3-201ENST00000493762 RB1CC1Q8TDY2 1594 aa25.05■■□□□ 1.6
AC008040.3-201ENST00000493762 NACADO15069 1562 aa24.98■■□□□ 1.59
AC008040.3-201ENST00000493762 ZCCHC6Q5VYS8 1495 aaKnown RBP24.94■■□□□ 1.58
AC008040.3-201ENST00000493762 MYO15BQ96JP2 1530 aa24.8■■□□□ 1.56
AC008040.3-201ENST00000493762 DCAF8L2P0C7V8 631 aa24.74■■□□□ 1.55
AC008040.3-201ENST00000493762 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.54
AC008040.3-201ENST00000493762 DCAF1Q9Y4B6 1507 aa24.69■■□□□ 1.54
AC008040.3-201ENST00000493762 BICRAQ9NZM4 1560 aa24.45■■□□□ 1.5
AC008040.3-201ENST00000493762 SCRIBQ14160 1630 aa24.36■■□□□ 1.49
AC008040.3-201ENST00000493762 PABPN1Q86U42 306 aaKnown RBP eCLIP24.3■■□□□ 1.48
AC008040.3-201ENST00000493762 DNAJC5BQ9UF47 199 aa24.02■■□□□ 1.44
AC008040.3-201ENST00000493762 SHROOM4Q9ULL8 1493 aa24.01■■□□□ 1.43
AC008040.3-201ENST00000493762 EIF4G1Q04637 1599 aaKnown RBP23.74■■□□□ 1.39
AC008040.3-201ENST00000493762 CC2D2AQ9P2K1 1620 aa23.66■■□□□ 1.38
AC008040.3-201ENST00000493762 CECR2Q9BXF3 1484 aa23.43■■□□□ 1.34
AC008040.3-201ENST00000493762 SMARCA4P51532 1647 aa23.27■■□□□ 1.32
AC008040.3-201ENST00000493762 BAZ1AQ9NRL2 1556 aaPredicted RBP23.14■■□□□ 1.29
AC008040.3-201ENST00000493762 ATAD2BQ9ULI0 1458 aa23.09■■□□□ 1.29
AC008040.3-201ENST00000493762 MROH2BQ7Z745 1585 aa23.08■■□□□ 1.29
AC008040.3-201ENST00000493762 NCAPD3P42695 1498 aa23.03■■□□□ 1.28
AC008040.3-201ENST00000493762 SMARCA2P51531 1590 aa23.01■■□□□ 1.27
AC008040.3-201ENST00000493762 PEG3Q9GZU2 1588 aa23.01■■□□□ 1.27
AC008040.3-201ENST00000493762 HMGXB3Q12766 1538 aa23■■□□□ 1.27
AC008040.3-201ENST00000493762 BAZ1BQ9UIG0 1483 aaKnown RBP22.87■■□□□ 1.25
AC008040.3-201ENST00000493762 WIZO95785 1651 aa22.86■■□□□ 1.25
AC008040.3-201ENST00000493762 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
AC008040.3-201ENST00000493762 NESP48681 1621 aa22.64■■□□□ 1.21
AC008040.3-201ENST00000493762 TOP2AP11388 1531 aaKnown RBP22.57■■□□□ 1.2
AC008040.3-201ENST00000493762 LAMC3Q9Y6N6 1575 aa22.49■■□□□ 1.19
AC008040.3-201ENST00000493762 AEBP2Q6ZN18 517 aaPredicted RBP22.46■■□□□ 1.19
AC008040.3-201ENST00000493762 KIF21AQ7Z4S6 1674 aa22.43■■□□□ 1.18
AC008040.3-201ENST00000493762 ERCC6Q03468 1493 aa22.42■■□□□ 1.18
AC008040.3-201ENST00000493762 THOC2Q8NI27 1593 aaKnown RBP22.38■■□□□ 1.17
AC008040.3-201ENST00000493762 CADPSQ9ULU8 1353 aa22.32■■□□□ 1.16
AC008040.3-201ENST00000493762 CCDC88BA6NC98 1476 aa22.25■■□□□ 1.15
AC008040.3-201ENST00000493762 CUX2O14529 1486 aa22.25■■□□□ 1.15
AC008040.3-201ENST00000493762 CFTRP13569 1480 aa22.24■■□□□ 1.15
AC008040.3-201ENST00000493762 PRDM2Q13029 1718 aa22.23■■□□□ 1.15
AC008040.3-201ENST00000493762 PDS5BQ9NTI5 1447 aa22.22■■□□□ 1.15
AC008040.3-201ENST00000493762 FANCD2Q9BXW9 1451 aa22.14■■□□□ 1.13
AC008040.3-201ENST00000493762 MRC2Q9UBG0 1479 aa22.12■■□□□ 1.13
AC008040.3-201ENST00000493762 CEP164Q9UPV0 1460 aa22.12■■□□□ 1.13
AC008040.3-201ENST00000493762 WDR62O43379 1518 aa22.11■■□□□ 1.13
AC008040.3-201ENST00000493762 URB2Q14146 1524 aaKnown RBP22■■□□□ 1.11
AC008040.3-201ENST00000493762 SUPT5HO00267 1087 aaKnown RBP21.92■■□□□ 1.1
AC008040.3-201ENST00000493762 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
AC008040.3-201ENST00000493762 DNMBPQ6XZF7 1577 aa21.79■■□□□ 1.08
AC008040.3-201ENST00000493762 CUX1P39880 1505 aa21.67■■□□□ 1.06
AC008040.3-201ENST00000493762 TARBP1Q13395 1621 aaKnown RBP21.65■■□□□ 1.06
AC008040.3-201ENST00000493762 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
AC008040.3-201ENST00000493762 ABCC8Q09428 1581 aa21.64■■□□□ 1.05
AC008040.3-201ENST00000493762 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
AC008040.3-201ENST00000493762 IFT140Q96RY7 1462 aa21.62■■□□□ 1.05
AC008040.3-201ENST00000493762 EIF4G3O43432 1585 aaKnown RBP21.61■■□□□ 1.05
AC008040.3-201ENST00000493762 FGD5Q6ZNL6 1462 aa21.57■■□□□ 1.04
AC008040.3-201ENST00000493762 DNAJC5Q9H3Z4 198 aa21.56■■□□□ 1.04
AC008040.3-201ENST00000493762 WDR97A6NE52 1622 aa21.54■■□□□ 1.04
AC008040.3-201ENST00000493762 RAD54L2Q9Y4B4 1467 aa21.53■■□□□ 1.04
AC008040.3-201ENST00000493762 SYNJ1O43426 1573 aa21.49■■□□□ 1.03
AC008040.3-201ENST00000493762 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
AC008040.3-201ENST00000493762 AQRO60306 1485 aaKnown RBP eCLIP21.43■■□□□ 1.02
AC008040.3-201ENST00000493762 TOP2BQ02880 1626 aa21.43■■□□□ 1.02
AC008040.3-201ENST00000493762 SOGA1O94964 1423 aa21.41■■□□□ 1.02
AC008040.3-201ENST00000493762 WRNQ14191 1432 aaPredicted RBP eCLIP21.38■■□□□ 1.01
AC008040.3-201ENST00000493762 CHD1O14646 1710 aa21.37■■□□□ 1.01
AC008040.3-201ENST00000493762 ABCA5Q8WWZ7 1642 aa21.36■■□□□ 1.01
AC008040.3-201ENST00000493762 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
AC008040.3-201ENST00000493762 TDRD9Q8NDG6 1382 aaKnown RBP21.34■■□□□ 1.01
AC008040.3-201ENST00000493762 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
AC008040.3-201ENST00000493762 ABCA10Q8WWZ4 1543 aa21.32■■□□□ 1
AC008040.3-201ENST00000493762 SNAPC4Q5SXM2 1469 aa21.29■■□□□ 1
AC008040.3-201ENST00000493762 GRIN2BQ13224 1484 aa21.21■□□□□ 0.99
AC008040.3-201ENST00000493762 GAPVD1Q14C86 1478 aa21.21■□□□□ 0.99
AC008040.3-201ENST00000493762 MAGI1Q96QZ7 1491 aaPredicted RBP21.18■□□□□ 0.98
AC008040.3-201ENST00000493762 ADAMTS12P58397 1594 aa21.16■□□□□ 0.98
AC008040.3-201ENST00000493762 OSCARQ8IYS5 282 aa21.13■□□□□ 0.97
AC008040.3-201ENST00000493762 SYNJ2O15056 1496 aa21.11■□□□□ 0.97
AC008040.3-201ENST00000493762 CLASP1Q7Z460 1538 aa21.1■□□□□ 0.97
AC008040.3-201ENST00000493762 RIMBP3CA6NJZ7 1639 aa21.1■□□□□ 0.97
AC008040.3-201ENST00000493762 RIMBP3BA6NNM3 1639 aa21.1■□□□□ 0.97
AC008040.3-201ENST00000493762 RIMBP3Q9UFD9 1639 aa21.1■□□□□ 0.97
AC008040.3-201ENST00000493762 ARHGEF11O15085 1522 aa21.04■□□□□ 0.96
AC008040.3-201ENST00000493762 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
AC008040.3-201ENST00000493762 FBLN2P98095 1184 aa21.02■□□□□ 0.96
AC008040.3-201ENST00000493762 GRIN2AQ12879 1464 aa21■□□□□ 0.95
AC008040.3-201ENST00000493762 CEP170Q5SW79 1584 aa20.99■□□□□ 0.95
AC008040.3-201ENST00000493762 FHAD1B1AJZ9 1412 aa20.94■□□□□ 0.94
AC008040.3-201ENST00000493762 CHMP7Q8WUX9 453 aaPredicted RBP20.93■□□□□ 0.94
AC008040.3-201ENST00000493762 NUP160Q12769 1436 aa20.92■□□□□ 0.94
AC008040.3-201ENST00000493762 ARAP1Q96P48 1450 aa20.91■□□□□ 0.94
AC008040.3-201ENST00000493762 CUL7Q14999 1698 aa20.88■□□□□ 0.93
AC008040.3-201ENST00000493762 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
AC008040.3-201ENST00000493762 RUSC2Q8N2Y8 1516 aa20.87■□□□□ 0.93
AC008040.3-201ENST00000493762 ERCC6L2Q5T890 1561 aa20.85■□□□□ 0.93
AC008040.3-201ENST00000493762 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
AC008040.3-201ENST00000493762 SHROOM2Q13796 1616 aa20.84■□□□□ 0.93
AC008040.3-201ENST00000493762 IGF1RP08069 1367 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms