RNA–Protein interactions for RNA: ENST00000492992.1

ECHDC2-217, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 370 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-217ENST00000492992 NISCHQ9Y2I1 1504 aa27.18■■□□□ 1.94
ECHDC2-217ENST00000492992 CCDC180Q9P1Z9 1646 aa23.95■■□□□ 1.43
ECHDC2-217ENST00000492992 ABCC9O60706 1549 aa22.9■■□□□ 1.26
ECHDC2-217ENST00000492992 ZCCHC6Q5VYS8 1495 aaKnown RBP22.75■■□□□ 1.23
ECHDC2-217ENST00000492992 DCAF1Q9Y4B6 1507 aa22.59■■□□□ 1.21
ECHDC2-217ENST00000492992 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
ECHDC2-217ENST00000492992 NACADO15069 1562 aa22.44■■□□□ 1.18
ECHDC2-217ENST00000492992 DCAF8L2P0C7V8 631 aa22.38■■□□□ 1.17
ECHDC2-217ENST00000492992 RB1CC1Q8TDY2 1594 aa22.3■■□□□ 1.16
ECHDC2-217ENST00000492992 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
ECHDC2-217ENST00000492992 UNC13AQ9UPW8 1703 aa21.72■■□□□ 1.07
ECHDC2-217ENST00000492992 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
ECHDC2-217ENST00000492992 SHROOM4Q9ULL8 1493 aa21.6■■□□□ 1.05
ECHDC2-217ENST00000492992 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
ECHDC2-217ENST00000492992 PABPN1Q86U42 306 aaKnown RBP eCLIP21.47■■□□□ 1.032e-7■□□□□ 10.8
ECHDC2-217ENST00000492992 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
ECHDC2-217ENST00000492992 BAZ1AQ9NRL2 1556 aaPredicted RBP21.04■□□□□ 0.96
ECHDC2-217ENST00000492992 EIF4G1Q04637 1599 aaKnown RBP21■□□□□ 0.95
ECHDC2-217ENST00000492992 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
ECHDC2-217ENST00000492992 MROH2BQ7Z745 1585 aa20.92■□□□□ 0.94
ECHDC2-217ENST00000492992 RSF1Q96T23 1441 aaPredicted RBP20.88■□□□□ 0.93
ECHDC2-217ENST00000492992 PEG3Q9GZU2 1588 aa20.83■□□□□ 0.92
ECHDC2-217ENST00000492992 CC2D2AQ9P2K1 1620 aa20.77■□□□□ 0.92
ECHDC2-217ENST00000492992 ATAD2BQ9ULI0 1458 aa20.76■□□□□ 0.91
ECHDC2-217ENST00000492992 SMARCA2P51531 1590 aa20.76■□□□□ 0.91
ECHDC2-217ENST00000492992 NCAPD3P42695 1498 aa20.72■□□□□ 0.91
ECHDC2-217ENST00000492992 WIZO95785 1651 aa20.68■□□□□ 0.9
ECHDC2-217ENST00000492992 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
ECHDC2-217ENST00000492992 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
ECHDC2-217ENST00000492992 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.89
ECHDC2-217ENST00000492992 TOP2AP11388 1531 aaKnown RBP20.55■□□□□ 0.88
ECHDC2-217ENST00000492992 DNAJC5Q9H3Z4 198 aa20.33■□□□□ 0.85
ECHDC2-217ENST00000492992 CCDC88BA6NC98 1476 aa20.3■□□□□ 0.84
ECHDC2-217ENST00000492992 CADPSQ9ULU8 1353 aa20.11■□□□□ 0.81
ECHDC2-217ENST00000492992 CFTRP13569 1480 aa20.1■□□□□ 0.81
ECHDC2-217ENST00000492992 LAMC3Q9Y6N6 1575 aa20.06■□□□□ 0.8
ECHDC2-217ENST00000492992 NESP48681 1621 aa19.95■□□□□ 0.78
ECHDC2-217ENST00000492992 PDS5BQ9NTI5 1447 aa19.92■□□□□ 0.78
ECHDC2-217ENST00000492992 PRDM2Q13029 1718 aa19.91■□□□□ 0.78
ECHDC2-217ENST00000492992 FANCD2Q9BXW9 1451 aa19.84■□□□□ 0.77
ECHDC2-217ENST00000492992 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
ECHDC2-217ENST00000492992 KIF21AQ7Z4S6 1674 aa19.71■□□□□ 0.75
ECHDC2-217ENST00000492992 ERCC6Q03468 1493 aa19.71■□□□□ 0.75
ECHDC2-217ENST00000492992 ABCC8Q09428 1581 aa19.67■□□□□ 0.74
ECHDC2-217ENST00000492992 WRNQ14191 1432 aaPredicted RBP eCLIP19.67■□□□□ 0.74
ECHDC2-217ENST00000492992 MRC2Q9UBG0 1479 aa19.65■□□□□ 0.74
ECHDC2-217ENST00000492992 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
ECHDC2-217ENST00000492992 DNMBPQ6XZF7 1577 aa19.6■□□□□ 0.73
ECHDC2-217ENST00000492992 THOC2Q8NI27 1593 aaKnown RBP19.59■□□□□ 0.73
ECHDC2-217ENST00000492992 WDR62O43379 1518 aa19.59■□□□□ 0.73
ECHDC2-217ENST00000492992 CUX1P39880 1505 aa19.59■□□□□ 0.73
ECHDC2-217ENST00000492992 TOPBP1Q92547 1522 aa19.58■□□□□ 0.73
ECHDC2-217ENST00000492992 CHIC1Q5VXU3 224 aa19.58■□□□□ 0.72
ECHDC2-217ENST00000492992 TOP2BQ02880 1626 aa19.58■□□□□ 0.72
ECHDC2-217ENST00000492992 BIVM-ERCC5R4GMW8 1640 aa19.56■□□□□ 0.72
ECHDC2-217ENST00000492992 SYNJ1O43426 1573 aa19.55■□□□□ 0.72
ECHDC2-217ENST00000492992 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
ECHDC2-217ENST00000492992 POLA1P09884 1462 aaPredicted RBP19.45■□□□□ 0.7
ECHDC2-217ENST00000492992 FGD5Q6ZNL6 1462 aa19.45■□□□□ 0.7
ECHDC2-217ENST00000492992 CUX2O14529 1486 aa19.41■□□□□ 0.7
ECHDC2-217ENST00000492992 SOGA1O94964 1423 aa19.38■□□□□ 0.69
ECHDC2-217ENST00000492992 IFT140Q96RY7 1462 aa19.37■□□□□ 0.69
ECHDC2-217ENST00000492992 ABCA10Q8WWZ4 1543 aa19.34■□□□□ 0.69
ECHDC2-217ENST00000492992 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.68
ECHDC2-217ENST00000492992 RAD54L2Q9Y4B4 1467 aa19.32■□□□□ 0.68
ECHDC2-217ENST00000492992 WDR97A6NE52 1622 aa19.28■□□□□ 0.68
ECHDC2-217ENST00000492992 KIF27Q86VH2 1401 aa19.24■□□□□ 0.67
ECHDC2-217ENST00000492992 EEA1Q15075 1411 aa19.23■□□□□ 0.67
ECHDC2-217ENST00000492992 ABCA5Q8WWZ7 1642 aa19.18■□□□□ 0.66
ECHDC2-217ENST00000492992 ZNF608Q9ULD9 1512 aaPredicted RBP19.18■□□□□ 0.66
ECHDC2-217ENST00000492992 TDRD9Q8NDG6 1382 aaKnown RBP19.18■□□□□ 0.66
ECHDC2-217ENST00000492992 GAPVD1Q14C86 1478 aa19.16■□□□□ 0.66
ECHDC2-217ENST00000492992 RUSC2Q8N2Y8 1516 aa19.15■□□□□ 0.66
ECHDC2-217ENST00000492992 AQRO60306 1485 aaKnown RBP eCLIP19.14■□□□□ 0.653e-6■■□□□ 13.8
ECHDC2-217ENST00000492992 EIF4G3O43432 1585 aaKnown RBP19.13■□□□□ 0.65
ECHDC2-217ENST00000492992 ERICH3Q5RHP9 1530 aa19.12■□□□□ 0.65
ECHDC2-217ENST00000492992 IGF1RP08069 1367 aa19.11■□□□□ 0.65
ECHDC2-217ENST00000492992 GRIN2BQ13224 1484 aa19.1■□□□□ 0.65
ECHDC2-217ENST00000492992 CSRNP3Q8WYN3 585 aa19.08■□□□□ 0.64
ECHDC2-217ENST00000492992 PBRM1Q86U86 1689 aa19.04■□□□□ 0.64
ECHDC2-217ENST00000492992 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
ECHDC2-217ENST00000492992 PRXQ9BXM0 1461 aa19.01■□□□□ 0.63
ECHDC2-217ENST00000492992 CUL7Q14999 1698 aa19.01■□□□□ 0.63
ECHDC2-217ENST00000492992 FAM9AQ8IZU1 332 aaPredicted RBP18.99■□□□□ 0.63
ECHDC2-217ENST00000492992 FHAD1B1AJZ9 1412 aa18.99■□□□□ 0.63
ECHDC2-217ENST00000492992 CARMIL1Q5VZK9 1371 aa18.98■□□□□ 0.63
ECHDC2-217ENST00000492992 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
ECHDC2-217ENST00000492992 ADAMTS12P58397 1594 aa18.95■□□□□ 0.62
ECHDC2-217ENST00000492992 KIF21BO75037 1637 aa18.93■□□□□ 0.62
ECHDC2-217ENST00000492992 SYNJ2O15056 1496 aa18.93■□□□□ 0.62
ECHDC2-217ENST00000492992 RAPGEF2Q9Y4G8 1499 aa18.93■□□□□ 0.62
ECHDC2-217ENST00000492992 GOLGA3Q08378 1498 aa18.85■□□□□ 0.61
ECHDC2-217ENST00000492992 GRIN2AQ12879 1464 aa18.85■□□□□ 0.61
ECHDC2-217ENST00000492992 CHMP7Q8WUX9 453 aaPredicted RBP18.85■□□□□ 0.61
ECHDC2-217ENST00000492992 NUP160Q12769 1436 aa18.78■□□□□ 0.6
ECHDC2-217ENST00000492992 FBLN2P98095 1184 aa18.76■□□□□ 0.59
ECHDC2-217ENST00000492992 CHD1O14646 1710 aa18.75■□□□□ 0.59
ECHDC2-217ENST00000492992 TNIKQ9UKE5 1360 aa18.74■□□□□ 0.59
ECHDC2-217ENST00000492992 LOC105371045A0A1W2PR82 267 aa18.72■□□□□ 0.59
ECHDC2-217ENST00000492992 KIAA0586Q9BVV6 1533 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms