RNA–Protein interactions for RNA: ENST00000491982.1

RBFOX2-213, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 2

Gene RBFOX2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-213ENST00000491982 AEBP2Q6ZN18 517 aaPredicted RBP24.2■■□□□ 1.46
RBFOX2-213ENST00000491982 CHIC1Q5VXU3 224 aa22.93■■□□□ 1.26
RBFOX2-213ENST00000491982 SENP3Q9H4L4 574 aaPredicted RBP20.61■□□□□ 0.89
RBFOX2-213ENST00000491982 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.85
RBFOX2-213ENST00000491982 NISCHQ9Y2I1 1504 aa19.51■□□□□ 0.71
RBFOX2-213ENST00000491982 FOXD1Q16676 465 aa19.23■□□□□ 0.67
RBFOX2-213ENST00000491982 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
RBFOX2-213ENST00000491982 MSH5O43196 834 aa17.99■□□□□ 0.47
RBFOX2-213ENST00000491982 PPP6R1Q9UPN7 881 aa17.95■□□□□ 0.46
RBFOX2-213ENST00000491982 PIAS4Q8N2W9 510 aaPredicted RBP17.92■□□□□ 0.46
RBFOX2-213ENST00000491982 ADRA2BP18089 450 aa17.85■□□□□ 0.45
RBFOX2-213ENST00000491982 POTEDQ86YR6 584 aa17.65■□□□□ 0.42
RBFOX2-213ENST00000491982 CCDC180Q9P1Z9 1646 aa17.18■□□□□ 0.34
RBFOX2-213ENST00000491982 ABCC9O60706 1549 aa16.56■□□□□ 0.24
RBFOX2-213ENST00000491982 MAPK8IP2Q13387 824 aaPredicted RBP16.41■□□□□ 0.22
RBFOX2-213ENST00000491982 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
RBFOX2-213ENST00000491982 ZCCHC6Q5VYS8 1495 aaKnown RBP16.32■□□□□ 0.2
RBFOX2-213ENST00000491982 SCAF1Q9H7N4 1312 aaKnown RBP16.32■□□□□ 0.2
RBFOX2-213ENST00000491982 DCAF8L2P0C7V8 631 aa16.21■□□□□ 0.19
RBFOX2-213ENST00000491982 DCAF1Q9Y4B6 1507 aa16.09■□□□□ 0.17
RBFOX2-213ENST00000491982 NACADO15069 1562 aa16.04■□□□□ 0.16
RBFOX2-213ENST00000491982 MYO15BQ96JP2 1530 aa16.01■□□□□ 0.15
RBFOX2-213ENST00000491982 RB1CC1Q8TDY2 1594 aa16■□□□□ 0.15
RBFOX2-213ENST00000491982 PPP4R3CPQ6ZMV5 832 aa16■□□□□ 0.15
RBFOX2-213ENST00000491982 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
RBFOX2-213ENST00000491982 HOXD11P31277 338 aaPredicted RBP15.76■□□□□ 0.11
RBFOX2-213ENST00000491982 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
RBFOX2-213ENST00000491982 SHROOM4Q9ULL8 1493 aa15.72■□□□□ 0.11
RBFOX2-213ENST00000491982 CNKSR2Q8WXI2 1034 aa15.72■□□□□ 0.11
RBFOX2-213ENST00000491982 RNF216Q9NWF9 866 aaPredicted RBP15.6■□□□□ 0.09
RBFOX2-213ENST00000491982 DCAF8L1A6NGE4 600 aa15.58■□□□□ 0.08
RBFOX2-213ENST00000491982 BICRAQ9NZM4 1560 aa15.56■□□□□ 0.08
RBFOX2-213ENST00000491982 PABPN1Q86U42 306 aaKnown RBP eCLIP15.54■□□□□ 0.08
RBFOX2-213ENST00000491982 CACNB1Q02641 598 aaPredicted RBP15.42■□□□□ 0.06
RBFOX2-213ENST00000491982 RNF39Q9H2S5 420 aa15.38■□□□□ 0.05
RBFOX2-213ENST00000491982 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
RBFOX2-213ENST00000491982 DNAJC5BQ9UF47 199 aa15.26■□□□□ 0.03
RBFOX2-213ENST00000491982 CECR2Q9BXF3 1484 aa15.21■□□□□ 0.03
RBFOX2-213ENST00000491982 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
RBFOX2-213ENST00000491982 C1QBPQ07021 282 aaKnown RBP15.13■□□□□ 0.01
RBFOX2-213ENST00000491982 EIF4G1Q04637 1599 aaKnown RBP15.11■□□□□ 0.01
RBFOX2-213ENST00000491982 SMARCA4P51532 1647 aa15.09■□□□□ 0.01
RBFOX2-213ENST00000491982 MROH2BQ7Z745 1585 aa15.08■□□□□ 0
RBFOX2-213ENST00000491982 BAZ1AQ9NRL2 1556 aaPredicted RBP15.08■□□□□ 0
RBFOX2-213ENST00000491982 RSF1Q96T23 1441 aaPredicted RBP15□□□□□ -0.01
RBFOX2-213ENST00000491982 CC2D2AQ9P2K1 1620 aa14.98□□□□□ -0.01
RBFOX2-213ENST00000491982 WIZO95785 1651 aa14.96□□□□□ -0.01
RBFOX2-213ENST00000491982 SUPT5HO00267 1087 aaKnown RBP14.92□□□□□ -0.02
RBFOX2-213ENST00000491982 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.92□□□□□ -0.02
RBFOX2-213ENST00000491982 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
RBFOX2-213ENST00000491982 PEG3Q9GZU2 1588 aa14.88□□□□□ -0.03
RBFOX2-213ENST00000491982 SMARCA2P51531 1590 aa14.87□□□□□ -0.03
RBFOX2-213ENST00000491982 KCNA4P22459 653 aa14.84□□□□□ -0.03
RBFOX2-213ENST00000491982 NCAPD3P42695 1498 aa14.8□□□□□ -0.04
RBFOX2-213ENST00000491982 BAZ1BQ9UIG0 1483 aaKnown RBP14.8□□□□□ -0.04
RBFOX2-213ENST00000491982 HMGXB3Q12766 1538 aa14.77□□□□□ -0.04
RBFOX2-213ENST00000491982 TOP2AP11388 1531 aaKnown RBP14.76□□□□□ -0.05
RBFOX2-213ENST00000491982 U3KPZ7 1027 aaPredicted RBP14.68□□□□□ -0.06
RBFOX2-213ENST00000491982 CCDC88BA6NC98 1476 aa14.6□□□□□ -0.07
RBFOX2-213ENST00000491982 SLC4A2P04920 1241 aa14.53□□□□□ -0.08
RBFOX2-213ENST00000491982 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.09
RBFOX2-213ENST00000491982 NESP48681 1621 aa14.44□□□□□ -0.1
RBFOX2-213ENST00000491982 CADPSQ9ULU8 1353 aa14.4□□□□□ -0.1
RBFOX2-213ENST00000491982 CFTRP13569 1480 aa14.39□□□□□ -0.11
RBFOX2-213ENST00000491982 CAPN15O75808 1086 aa14.38□□□□□ -0.11
RBFOX2-213ENST00000491982 DSG3P32926 999 aa14.37□□□□□ -0.11
RBFOX2-213ENST00000491982 LAMC3Q9Y6N6 1575 aa14.37□□□□□ -0.11
RBFOX2-213ENST00000491982 PRDM2Q13029 1718 aa14.35□□□□□ -0.11
RBFOX2-213ENST00000491982 KIF21AQ7Z4S6 1674 aa14.29□□□□□ -0.12
RBFOX2-213ENST00000491982 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.12
RBFOX2-213ENST00000491982 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
RBFOX2-213ENST00000491982 ABCC8Q09428 1581 aa14.23□□□□□ -0.13
RBFOX2-213ENST00000491982 ERCC6Q03468 1493 aa14.21□□□□□ -0.13
RBFOX2-213ENST00000491982 APLP2Q06481 763 aa14.21□□□□□ -0.13
RBFOX2-213ENST00000491982 CEP164Q9UPV0 1460 aa14.2□□□□□ -0.14
RBFOX2-213ENST00000491982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.2□□□□□ -0.14
RBFOX2-213ENST00000491982 HNRNPUL2Q1KMD3 747 aaKnown RBP14.2□□□□□ -0.14
RBFOX2-213ENST00000491982 ZNF219Q9P2Y4 722 aaPredicted RBP14.16□□□□□ -0.14
RBFOX2-213ENST00000491982 SAMD1Q6SPF0 538 aaPredicted RBP14.14□□□□□ -0.15
RBFOX2-213ENST00000491982 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
RBFOX2-213ENST00000491982 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
RBFOX2-213ENST00000491982 WRNQ14191 1432 aaPredicted RBP eCLIP14.13□□□□□ -0.15
RBFOX2-213ENST00000491982 SYNJ1O43426 1573 aa14.13□□□□□ -0.15
RBFOX2-213ENST00000491982 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
RBFOX2-213ENST00000491982 CUX1P39880 1505 aa14.12□□□□□ -0.15
RBFOX2-213ENST00000491982 MRC2Q9UBG0 1479 aa14.12□□□□□ -0.15
RBFOX2-213ENST00000491982 DNMBPQ6XZF7 1577 aa14.09□□□□□ -0.15
RBFOX2-213ENST00000491982 TOPBP1Q92547 1522 aa14.08□□□□□ -0.16
RBFOX2-213ENST00000491982 TOP2BQ02880 1626 aa14.07□□□□□ -0.16
RBFOX2-213ENST00000491982 WDR62O43379 1518 aa14.06□□□□□ -0.16
RBFOX2-213ENST00000491982 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
RBFOX2-213ENST00000491982 ABCB7O75027 752 aa14.06□□□□□ -0.16
RBFOX2-213ENST00000491982 MYCNP04198 464 aaPredicted RBP14.03□□□□□ -0.16
RBFOX2-213ENST00000491982 TRIM41Q8WV44 630 aa14.02□□□□□ -0.17
RBFOX2-213ENST00000491982 FGD5Q6ZNL6 1462 aa14.01□□□□□ -0.17
RBFOX2-213ENST00000491982 POLA1P09884 1462 aaPredicted RBP13.99□□□□□ -0.17
RBFOX2-213ENST00000491982 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
RBFOX2-213ENST00000491982 RAD54L2Q9Y4B4 1467 aa13.96□□□□□ -0.17
RBFOX2-213ENST00000491982 CUX2O14529 1486 aa13.95□□□□□ -0.18
RBFOX2-213ENST00000491982 SOGA1O94964 1423 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms