RNA–Protein interactions for RNA: ENST00000491797.1

C1orf109-209, Transcript of chromosome 1 open reading frame 109, humanhuman

TSL 2

Gene C1orf109, Length 649 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf109-209ENST00000491797 NISCHQ9Y2I1 1504 aa31.65■■■□□ 2.66
C1orf109-209ENST00000491797 ABCC9O60706 1549 aa28.92■■■□□ 2.22
C1orf109-209ENST00000491797 CCDC180Q9P1Z9 1646 aa28.69■■■□□ 2.18
C1orf109-209ENST00000491797 RB1CC1Q8TDY2 1594 aa27.45■■□□□ 1.99
C1orf109-209ENST00000491797 DNAJC5BQ9UF47 199 aa27.45■■□□□ 1.98
C1orf109-209ENST00000491797 NACADO15069 1562 aa27.17■■□□□ 1.94
C1orf109-209ENST00000491797 UNC13AQ9UPW8 1703 aa26.86■■□□□ 1.89
C1orf109-209ENST00000491797 PABPN1Q86U42 306 aaKnown RBP eCLIP26.8■■□□□ 1.88
C1orf109-209ENST00000491797 DCAF8L2P0C7V8 631 aa26.76■■□□□ 1.87
C1orf109-209ENST00000491797 MYO15BQ96JP2 1530 aa26.7■■□□□ 1.86
C1orf109-209ENST00000491797 BICRAQ9NZM4 1560 aa26.64■■□□□ 1.86
C1orf109-209ENST00000491797 SHROOM4Q9ULL8 1493 aa26.33■■□□□ 1.81
C1orf109-209ENST00000491797 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
C1orf109-209ENST00000491797 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
C1orf109-209ENST00000491797 ZCCHC6Q5VYS8 1495 aaKnown RBP26.16■■□□□ 1.78
C1orf109-209ENST00000491797 CECR2Q9BXF3 1484 aa26.14■■□□□ 1.78
C1orf109-209ENST00000491797 EIF4G1Q04637 1599 aaKnown RBP26.03■■□□□ 1.76
C1orf109-209ENST00000491797 SCRIBQ14160 1630 aa25.99■■□□□ 1.75
C1orf109-209ENST00000491797 DNAJC5Q9H3Z4 198 aa25.57■■□□□ 1.68
C1orf109-209ENST00000491797 CUX2O14529 1486 aa25.19■■□□□ 1.62
C1orf109-209ENST00000491797 NCAPD3P42695 1498 aa25.05■■□□□ 1.6
C1orf109-209ENST00000491797 ERCC6Q03468 1493 aa25.04■■□□□ 1.6
C1orf109-209ENST00000491797 ATAD2BQ9ULI0 1458 aa24.89■■□□□ 1.58
C1orf109-209ENST00000491797 HMGXB3Q12766 1538 aa24.87■■□□□ 1.57
C1orf109-209ENST00000491797 SMARCA2P51531 1590 aa24.86■■□□□ 1.57
C1orf109-209ENST00000491797 SMARCA4P51532 1647 aa24.81■■□□□ 1.56
C1orf109-209ENST00000491797 NESP48681 1621 aa24.73■■□□□ 1.55
C1orf109-209ENST00000491797 THOC2Q8NI27 1593 aaKnown RBP24.65■■□□□ 1.54
C1orf109-209ENST00000491797 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.54
C1orf109-209ENST00000491797 BAZ1AQ9NRL2 1556 aaPredicted RBP24.63■■□□□ 1.53
C1orf109-209ENST00000491797 PEG3Q9GZU2 1588 aa24.6■■□□□ 1.53
C1orf109-209ENST00000491797 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
C1orf109-209ENST00000491797 KIF21AQ7Z4S6 1674 aa24.49■■□□□ 1.51
C1orf109-209ENST00000491797 PDS5BQ9NTI5 1447 aa24.43■■□□□ 1.5
C1orf109-209ENST00000491797 MROH2BQ7Z745 1585 aa24.35■■□□□ 1.49
C1orf109-209ENST00000491797 CADPSQ9ULU8 1353 aa24.25■■□□□ 1.47
C1orf109-209ENST00000491797 MRC2Q9UBG0 1479 aa24.23■■□□□ 1.47
C1orf109-209ENST00000491797 WDR62O43379 1518 aa24.22■■□□□ 1.47
C1orf109-209ENST00000491797 TRIM41Q8WV44 630 aa24.21■■□□□ 1.47
C1orf109-209ENST00000491797 WIZO95785 1651 aa24.06■■□□□ 1.44
C1orf109-209ENST00000491797 CEP164Q9UPV0 1460 aa24.06■■□□□ 1.44
C1orf109-209ENST00000491797 FANCD2Q9BXW9 1451 aa23.97■■□□□ 1.43
C1orf109-209ENST00000491797 CFTRP13569 1480 aa23.91■■□□□ 1.42
C1orf109-209ENST00000491797 OSCARQ8IYS5 282 aa23.9■■□□□ 1.42
C1orf109-209ENST00000491797 URB2Q14146 1524 aaKnown RBP23.79■■□□□ 1.4
C1orf109-209ENST00000491797 TOP2AP11388 1531 aaKnown RBP23.75■■□□□ 1.39
C1orf109-209ENST00000491797 PRDM2Q13029 1718 aa23.75■■□□□ 1.39
C1orf109-209ENST00000491797 RSF1Q96T23 1441 aaPredicted RBP23.69■■□□□ 1.38
C1orf109-209ENST00000491797 RIMBP3CA6NJZ7 1639 aa23.68■■□□□ 1.38
C1orf109-209ENST00000491797 RIMBP3BA6NNM3 1639 aa23.68■■□□□ 1.38
C1orf109-209ENST00000491797 RIMBP3Q9UFD9 1639 aa23.68■■□□□ 1.38
C1orf109-209ENST00000491797 IFT140Q96RY7 1462 aa23.59■■□□□ 1.37
C1orf109-209ENST00000491797 ARHGEF11O15085 1522 aa23.55■■□□□ 1.36
C1orf109-209ENST00000491797 ZNF608Q9ULD9 1512 aaPredicted RBP23.55■■□□□ 1.36
C1orf109-209ENST00000491797 TOPBP1Q92547 1522 aa23.48■■□□□ 1.35
C1orf109-209ENST00000491797 EIF4G3O43432 1585 aaKnown RBP23.47■■□□□ 1.35
C1orf109-209ENST00000491797 ABCC8Q09428 1581 aa23.45■■□□□ 1.34
C1orf109-209ENST00000491797 CCDC88BA6NC98 1476 aa23.44■■□□□ 1.34
C1orf109-209ENST00000491797 DNMBPQ6XZF7 1577 aa23.4■■□□□ 1.34
C1orf109-209ENST00000491797 CHD1O14646 1710 aa23.38■■□□□ 1.33
C1orf109-209ENST00000491797 TARBP1Q13395 1621 aaKnown RBP23.34■■□□□ 1.33
C1orf109-209ENST00000491797 CYB5RLQ6IPT4 315 aa23.33■■□□□ 1.33
C1orf109-209ENST00000491797 AQRO60306 1485 aaKnown RBP eCLIP23.28■■□□□ 1.325e-6■■■□□ 16.9
C1orf109-209ENST00000491797 ARAP1Q96P48 1450 aa23.27■■□□□ 1.32
C1orf109-209ENST00000491797 POLA1P09884 1462 aaPredicted RBP23.21■■□□□ 1.31
C1orf109-209ENST00000491797 TRHP20396 242 aaPredicted RBP23.2■■□□□ 1.3
C1orf109-209ENST00000491797 FBLN2P98095 1184 aa23.17■■□□□ 1.3
C1orf109-209ENST00000491797 WDR97A6NE52 1622 aa23.15■■□□□ 1.3
C1orf109-209ENST00000491797 CLASP1Q7Z460 1538 aa23.09■■□□□ 1.29
C1orf109-209ENST00000491797 RAD54L2Q9Y4B4 1467 aa23.09■■□□□ 1.29
C1orf109-209ENST00000491797 SOGA1O94964 1423 aa23.08■■□□□ 1.28
C1orf109-209ENST00000491797 SNAPC4Q5SXM2 1469 aa23.05■■□□□ 1.28
C1orf109-209ENST00000491797 TDRD9Q8NDG6 1382 aaKnown RBP23.05■■□□□ 1.28
C1orf109-209ENST00000491797 SYNJ1O43426 1573 aa23.05■■□□□ 1.28
C1orf109-209ENST00000491797 MAGI1Q96QZ7 1491 aaPredicted RBP23.03■■□□□ 1.28
C1orf109-209ENST00000491797 FGD5Q6ZNL6 1462 aa23■■□□□ 1.27
C1orf109-209ENST00000491797 CHMP7Q8WUX9 453 aaPredicted RBP22.97■■□□□ 1.27
C1orf109-209ENST00000491797 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
C1orf109-209ENST00000491797 SYNJ2O15056 1496 aa22.94■■□□□ 1.26
C1orf109-209ENST00000491797 CUX1P39880 1505 aa22.92■■□□□ 1.26
C1orf109-209ENST00000491797 PBRM1Q86U86 1689 aa22.89■■□□□ 1.25
C1orf109-209ENST00000491797 AEBP2Q6ZN18 517 aaPredicted RBP22.85■■□□□ 1.25
C1orf109-209ENST00000491797 GAPVD1Q14C86 1478 aa22.84■■□□□ 1.25
C1orf109-209ENST00000491797 ABCA5Q8WWZ7 1642 aa22.77■■□□□ 1.24
C1orf109-209ENST00000491797 ABCA10Q8WWZ4 1543 aa22.75■■□□□ 1.23
C1orf109-209ENST00000491797 GRIN2AQ12879 1464 aa22.66■■□□□ 1.22
C1orf109-209ENST00000491797 ERCC6L2Q5T890 1561 aa22.64■■□□□ 1.22
C1orf109-209ENST00000491797 ADAMTS12P58397 1594 aa22.62■■□□□ 1.21
C1orf109-209ENST00000491797 CEP170Q5SW79 1584 aa22.62■■□□□ 1.21
C1orf109-209ENST00000491797 NUP160Q12769 1436 aa22.6■■□□□ 1.21
C1orf109-209ENST00000491797 SHROOM2Q13796 1616 aa22.6■■□□□ 1.21
C1orf109-209ENST00000491797 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
C1orf109-209ENST00000491797 KIF13AQ9H1H9 1805 aa22.53■■□□□ 1.2
C1orf109-209ENST00000491797 FHAD1B1AJZ9 1412 aa22.51■■□□□ 1.19
C1orf109-209ENST00000491797 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
C1orf109-209ENST00000491797 TOP2BQ02880 1626 aa22.48■■□□□ 1.19
C1orf109-209ENST00000491797 ERICH3Q5RHP9 1530 aa22.47■■□□□ 1.19
C1orf109-209ENST00000491797 PRG4Q92954 1404 aaPredicted RBP22.39■■□□□ 1.17
C1orf109-209ENST00000491797 RUSC2Q8N2Y8 1516 aa22.32■■□□□ 1.16
C1orf109-209ENST00000491797 JPH4Q96JJ6 628 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 773.2 ms