RNA–Protein interactions for RNA: ENST00000491348.5

GNAS-250, Transcript of GNAS complex locus, humanhuman

TSL 3

Gene GNAS, Length 1,068 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNAS-250ENST00000491348 TRA2AQ13595 282 aaKnown RBP eCLIP17.91■□□□□ 0.467e-17■■■■■ 73.3
GNAS-250ENST00000491348 GTF2F1P35269 517 aaKnown RBP eCLIP20.26■□□□□ 0.832e-9■■■■■ 69.5
GNAS-250ENST00000491348 AGGF1Q8N302 714 aaeCLIP17.08■□□□□ 0.323e-8■■■■■ 55.1
GNAS-250ENST00000491348 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.78■■□□□ 1.087e-23■■■■■ 46.4
GNAS-250ENST00000491348 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.98■□□□□ 0.634e-6■■■■■ 41.6
GNAS-250ENST00000491348 PCBP2Q15366 365 aaKnown RBP eCLIP16.64■□□□□ 0.252e-8■■■■■ 38
GNAS-250ENST00000491348 SF3B1O75533 1304 aaKnown RBP eCLIP19.87■□□□□ 0.771e-6■■■■■ 35.8
GNAS-250ENST00000491348 NCBP2P52298 156 aaKnown RBP eCLIP16.31■□□□□ 0.23e-11■■■■■ 33.2
GNAS-250ENST00000491348 NONOQ15233 471 aaKnown RBP eCLIP20.28■□□□□ 0.846e-7■■■■■ 32.8
GNAS-250ENST00000491348 AQRO60306 1485 aaKnown RBP eCLIP32.6■■■□□ 2.812e-10■■■■■ 32.6
GNAS-250ENST00000491348 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.79■□□□□ 0.762e-9■■■■■ 31.7
GNAS-250ENST00000491348 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.09■□□□□ 0.332e-7■■■■■ 30.3
GNAS-250ENST00000491348 DDX3XO00571 662 aaKnown RBP eCLIP18.11■□□□□ 0.494e-21■■■■■ 29
GNAS-250ENST00000491348 RBFOX2O43251 390 aaKnown RBP eCLIP13.61□□□□□ -0.236e-7■■■■■ 27.7
GNAS-250ENST00000491348 PRPF4O43172 522 aaKnown RBP eCLIP17.18■□□□□ 0.346e-9■■■■■ 27.7
GNAS-250ENST00000491348 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.02■□□□□ 0.322e-11■■■■■ 27
GNAS-250ENST00000491348 QKIQ96PU8 341 aaKnown RBP eCLIP17.69■□□□□ 0.422e-11■■■■□ 25.7
GNAS-250ENST00000491348 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.51■□□□□ 0.552e-8■■■■□ 25.1
GNAS-250ENST00000491348 CDC40O60508 579 aaKnown RBP eCLIP16.71■□□□□ 0.278e-9■■■■□ 23.3
GNAS-250ENST00000491348 YWHAGP61981 247 aaKnown RBP eCLIP18.88■□□□□ 0.612e-6■■■■□ 22.9
GNAS-250ENST00000491348 EWSR1Q01844 656 aaKnown RBP eCLIP13.28□□□□□ -0.287e-7■■■■□ 21.8
GNAS-250ENST00000491348 SRSF1Q07955 248 aaKnown RBP eCLIP17.4■□□□□ 0.381e-7■■■■□ 21.3
GNAS-250ENST00000491348 SFPQP23246 707 aaKnown RBP eCLIP20.2■□□□□ 0.825e-7■■■■□ 20.8
GNAS-250ENST00000491348 PUM1Q14671 1186 aaKnown RBP eCLIP19.3■□□□□ 0.686e-9■■■■□ 20.6
GNAS-250ENST00000491348 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.63■□□□□ 0.091e-11■■■■□ 20.6
GNAS-250ENST00000491348 PCBP1Q15365 356 aaKnown RBP eCLIP20.1■□□□□ 0.811e-36■■■■□ 20
GNAS-250ENST00000491348 FUSP35637 526 aaKnown RBP eCLIP12.13□□□□□ -0.472e-6■■■□□ 19.1
GNAS-250ENST00000491348 GPKOWQ92917 476 aaPredicted RBP eCLIP20.75■□□□□ 0.912e-7■■■□□ 19.1
GNAS-250ENST00000491348 FTOQ9C0B1 505 aaKnown RBP eCLIP20.83■□□□□ 0.939e-7■■■□□ 18.4
GNAS-250ENST00000491348 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.67■□□□□ 0.264e-25■■■□□ 18.1
GNAS-250ENST00000491348 TROVE2P10155 538 aaKnown RBP eCLIP15.41■□□□□ 0.062e-7■■■□□ 18
GNAS-250ENST00000491348 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.64■□□□□ 0.571e-7■■■□□ 17.6
GNAS-250ENST00000491348 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.06■■■□□ 2.084e-16■■■□□ 16.9
GNAS-250ENST00000491348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.72■■■□□ 2.353e-7■■■□□ 16.6
GNAS-250ENST00000491348 XRCC6P12956 609 aaKnown RBP eCLIP20.04■□□□□ 0.84e-10■■■□□ 16.4
GNAS-250ENST00000491348 EFTUD2Q15029 972 aaKnown RBP eCLIP16.78■□□□□ 0.281e-8■■■□□ 16.4
GNAS-250ENST00000491348 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.02■□□□□ 0.481e-6■■■□□ 16.3
GNAS-250ENST00000491348 SMNDC1O75940 238 aaKnown RBP eCLIP16.23■□□□□ 0.194e-7■■■□□ 16.1
GNAS-250ENST00000491348 HNRNPLP14866 589 aaKnown RBP eCLIP18.97■□□□□ 0.632e-7■■■□□ 15.9
GNAS-250ENST00000491348 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.22■□□□□ 0.192e-7■■■□□ 15.7
GNAS-250ENST00000491348 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.98■□□□□ 0.312e-8■■■□□ 14.8
GNAS-250ENST00000491348 SF3B4Q15427 424 aaKnown RBP eCLIP16.51■□□□□ 0.237e-10■■■□□ 14.8
GNAS-250ENST00000491348 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.69□□□□□ -0.068e-8■■■□□ 14.7
GNAS-250ENST00000491348 UPF1Q92900 1129 aaKnown RBP eCLIP26.42■■□□□ 1.828e-9■■□□□ 14
GNAS-250ENST00000491348 HNRNPMP52272 730 aaKnown RBP eCLIP28.85■■■□□ 2.212e-13■■□□□ 13.8
GNAS-250ENST00000491348 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.07■□□□□ 0.964e-7■■□□□ 13.8
GNAS-250ENST00000491348 RBM22Q9NW64 420 aaKnown RBP eCLIP17.93■□□□□ 0.462e-10■■□□□ 12.9
GNAS-250ENST00000491348 G3BP1Q13283 466 aaKnown RBP eCLIP22.23■■□□□ 1.159e-10■■□□□ 12.6
GNAS-250ENST00000491348 SAFB2Q14151 953 aaKnown RBP eCLIP26.34■■□□□ 1.814e-7■■□□□ 12.5
GNAS-250ENST00000491348 TARDBPQ13148 414 aaKnown RBP eCLIP18.31■□□□□ 0.521e-12■■□□□ 12.4
GNAS-250ENST00000491348 NKRFO15226 690 aaKnown RBP eCLIP21.07■□□□□ 0.962e-10■■□□□ 12.2
GNAS-250ENST00000491348 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.1□□□□□ -0.155e-6■■□□□ 12.2
GNAS-250ENST00000491348 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.62■□□□□ 0.895e-12■■□□□ 12
GNAS-250ENST00000491348 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.58■□□□□ 0.246e-7■■□□□ 11.7
GNAS-250ENST00000491348 TIA1P31483 386 aaKnown RBP eCLIP16.38■□□□□ 0.211e-18■■□□□ 11.5
GNAS-250ENST00000491348 YBX3P16989 372 aaKnown RBP eCLIP24.42■■□□□ 1.52e-6■■□□□ 11.4
GNAS-250ENST00000491348 WRNQ14191 1432 aaPredicted RBP eCLIP32.09■■■□□ 2.734e-6■■□□□ 11.4
GNAS-250ENST00000491348 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.45■□□□□ 0.387e-7■□□□□ 11.1
GNAS-250ENST00000491348 RBM5P52756 815 aaKnown RBP eCLIP22.6■■□□□ 1.218e-8■□□□□ 11.1
GNAS-250ENST00000491348 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.05■□□□□ -03e-6■□□□□ 11
GNAS-250ENST00000491348 DDX6P26196 483 aaKnown RBP eCLIP19.36■□□□□ 0.692e-9■□□□□ 10.7
GNAS-250ENST00000491348 PPIGQ13427 754 aaKnown RBP eCLIP21.12■□□□□ 0.977e-21■□□□□ 10.4
GNAS-250ENST00000491348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.08■■□□□ 1.137e-6■□□□□ 9.9
GNAS-250ENST00000491348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.92■■■□□ 2.064e-8■□□□□ 9.9
GNAS-250ENST00000491348 DDX21Q9NR30 783 aaKnown RBP eCLIP23.51■■□□□ 1.355e-6■□□□□ 9.8
GNAS-250ENST00000491348 METAP2P50579 478 aaKnown RBP eCLIP20.53■□□□□ 0.881e-7■□□□□ 9.5
GNAS-250ENST00000491348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.41■■□□□ 1.021e-13■□□□□ 9.5
GNAS-250ENST00000491348 SF3A3Q12874 501 aaKnown RBP eCLIP15.28■□□□□ 0.047e-9■□□□□ 9.4
GNAS-250ENST00000491348 HNRNPCP07910 306 aaKnown RBP eCLIP13.12□□□□□ -0.316e-9■□□□□ 9.3
GNAS-250ENST00000491348 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.77■■□□□ 1.086e-7■□□□□ 8.8
GNAS-250ENST00000491348 HNRNPUQ00839 825 aaKnown RBP eCLIP22.2■■□□□ 1.142e-8■□□□□ 8.8
GNAS-250ENST00000491348 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.76■□□□□ 0.592e-6■□□□□ 8.6
GNAS-250ENST00000491348 DDX42Q86XP3 938 aaKnown RBP eCLIP19.15■□□□□ 0.662e-6■□□□□ 8.3
Retrieved 73 of 73 RNA–protein pairs in 226.9 ms