RNA–Protein interactions for RNA: ENST00000490914.1

SSB-211, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-211ENST00000490914 AEBP2Q6ZN18 517 aaPredicted RBP30.13■■■□□ 2.41
SSB-211ENST00000490914 CHIC1Q5VXU3 224 aa28.86■■■□□ 2.21
SSB-211ENST00000490914 SENP3Q9H4L4 574 aaPredicted RBP25.64■■□□□ 1.7
SSB-211ENST00000490914 PHF23Q9BUL5 403 aaPredicted RBP25.38■■□□□ 1.65
SSB-211ENST00000490914 FOXD1Q16676 465 aa23.86■■□□□ 1.41
SSB-211ENST00000490914 PLPPR3Q6T4P5 718 aa23.17■■□□□ 1.3
SSB-211ENST00000490914 PPP6R1Q9UPN7 881 aa22.57■■□□□ 1.2
SSB-211ENST00000490914 ADRA2BP18089 450 aa22.51■■□□□ 1.19
SSB-211ENST00000490914 PIAS4Q8N2W9 510 aaPredicted RBP22.38■■□□□ 1.17
SSB-211ENST00000490914 MSH5O43196 834 aa22.28■■□□□ 1.16
SSB-211ENST00000490914 POTEDQ86YR6 584 aa21.44■■□□□ 1.02
SSB-211ENST00000490914 MAPK8IP2Q13387 824 aaPredicted RBP20.59■□□□□ 0.89
SSB-211ENST00000490914 SCAF1Q9H7N4 1312 aaKnown RBP20.52■□□□□ 0.87
SSB-211ENST00000490914 PPP4R3CPQ6ZMV5 832 aa20.39■□□□□ 0.85
SSB-211ENST00000490914 DMRT2Q9Y5R5 561 aa20.34■□□□□ 0.85
SSB-211ENST00000490914 CNKSR2Q8WXI2 1034 aa19.9■□□□□ 0.78
SSB-211ENST00000490914 HOXD11P31277 338 aaPredicted RBP19.71■□□□□ 0.75
SSB-211ENST00000490914 NCBP3Q53F19 620 aaKnown RBP19.64■□□□□ 0.73
SSB-211ENST00000490914 RNF216Q9NWF9 866 aaPredicted RBP19.64■□□□□ 0.73
SSB-211ENST00000490914 DCAF8L1A6NGE4 600 aa19.59■□□□□ 0.73
SSB-211ENST00000490914 NPM3O75607 178 aaKnown RBP19.44■□□□□ 0.7
SSB-211ENST00000490914 KCNA4P22459 653 aa19.38■□□□□ 0.69
SSB-211ENST00000490914 CACNB1Q02641 598 aaPredicted RBP19.04■□□□□ 0.64
SSB-211ENST00000490914 RNF39Q9H2S5 420 aa19.01■□□□□ 0.63
SSB-211ENST00000490914 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
SSB-211ENST00000490914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.79■□□□□ 0.61e-8■■□□□ 14.5
SSB-211ENST00000490914 C1QBPQ07021 282 aaKnown RBP18.75■□□□□ 0.59
SSB-211ENST00000490914 SLC4A2P04920 1241 aa18.5■□□□□ 0.55
SSB-211ENST00000490914 U3KPZ7 1027 aaPredicted RBP18.47■□□□□ 0.55
SSB-211ENST00000490914 SLC4A1APQ9BWU0 796 aaKnown RBP18.32■□□□□ 0.52
SSB-211ENST00000490914 SPINK5Q9NQ38 1064 aaPredicted RBP18.12■□□□□ 0.49
SSB-211ENST00000490914 CAPN15O75808 1086 aa18.07■□□□□ 0.48
SSB-211ENST00000490914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.94■□□□□ 0.46
SSB-211ENST00000490914 HNRNPUL2Q1KMD3 747 aaKnown RBP17.94■□□□□ 0.46
SSB-211ENST00000490914 MYCNP04198 464 aaPredicted RBP17.93■□□□□ 0.46
SSB-211ENST00000490914 APLP2Q06481 763 aa17.93■□□□□ 0.46
SSB-211ENST00000490914 FOXD4L1Q9NU39 408 aa17.93■□□□□ 0.46
SSB-211ENST00000490914 SAMD1Q6SPF0 538 aaPredicted RBP17.88■□□□□ 0.45
SSB-211ENST00000490914 DSG3P32926 999 aa17.87■□□□□ 0.45
SSB-211ENST00000490914 ZBTB22O15209 634 aa17.85■□□□□ 0.45
SSB-211ENST00000490914 TRHP20396 242 aaPredicted RBP17.83■□□□□ 0.44
SSB-211ENST00000490914 ZNF219Q9P2Y4 722 aaPredicted RBP17.77■□□□□ 0.44
SSB-211ENST00000490914 ABCB7O75027 752 aa17.68■□□□□ 0.42
SSB-211ENST00000490914 ATF5Q9Y2D1 282 aaPredicted RBP17.58■□□□□ 0.4
SSB-211ENST00000490914 POLA2Q14181 598 aa17.41■□□□□ 0.38
SSB-211ENST00000490914 ATXN8OSP0DMR3 200 aa17.3■□□□□ 0.36
SSB-211ENST00000490914 CSRNP3Q8WYN3 585 aa17.3■□□□□ 0.36
SSB-211ENST00000490914 EHMT2Q96KQ7 1210 aa17.25■□□□□ 0.35
SSB-211ENST00000490914 RBM42Q9BTD8 480 aaKnown RBP17.07■□□□□ 0.32
SSB-211ENST00000490914 ZBTB12Q9Y330 459 aaPredicted RBP17.02■□□□□ 0.32
SSB-211ENST00000490914 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
SSB-211ENST00000490914 POTEHQ6S545 545 aa16.85■□□□□ 0.29
SSB-211ENST00000490914 MKRN4PQ13434 485 aaPredicted RBP16.77■□□□□ 0.28
SSB-211ENST00000490914 FBLN2P98095 1184 aa16.76■□□□□ 0.27
SSB-211ENST00000490914 AKT1S1Q96B36 256 aa16.7■□□□□ 0.26
SSB-211ENST00000490914 CHRDL2Q6WN34 429 aa16.62■□□□□ 0.25
SSB-211ENST00000490914 SPDYE2BA6NHP3 402 aa16.54■□□□□ 0.24
SSB-211ENST00000490914 SPDYE6P0CI01 402 aa16.54■□□□□ 0.24
SSB-211ENST00000490914 SPDYE2Q495Y8 402 aa16.54■□□□□ 0.24
SSB-211ENST00000490914 REM2Q8IYK8 340 aaPredicted RBP16.54■□□□□ 0.24
SSB-211ENST00000490914 ZNF692Q9BU19 519 aaPredicted RBP16.42■□□□□ 0.22
SSB-211ENST00000490914 SSUH2Q9Y2M2 353 aa16.4■□□□□ 0.22
SSB-211ENST00000490914 PITPNM1O00562 1244 aa16.38■□□□□ 0.21
SSB-211ENST00000490914 PIP4P2Q8N4L2 257 aa16.26■□□□□ 0.19
SSB-211ENST00000490914 PABPN1Q86U42 306 aaKnown RBP eCLIP16.21■□□□□ 0.19
SSB-211ENST00000490914 SPDYE1Q8NFV5 336 aaPredicted RBP16.18■□□□□ 0.18
SSB-211ENST00000490914 CLEC11AQ9Y240 323 aa16.18■□□□□ 0.18
SSB-211ENST00000490914 FXR2P51116 673 aaKnown RBP eCLIP16.17■□□□□ 0.181e-10■■□□□ 14.4
SSB-211ENST00000490914 SPDYE4A6NLX3 237 aa16.09■□□□□ 0.17
SSB-211ENST00000490914 PRKAR2AP13861 404 aaKnown RBP15.97■□□□□ 0.15
SSB-211ENST00000490914 HAX1O00165 279 aa15.95■□□□□ 0.14
SSB-211ENST00000490914 PRR29P0C7W0 189 aa15.92■□□□□ 0.14
SSB-211ENST00000490914 CHADLQ6NUI6 762 aa15.88■□□□□ 0.13
SSB-211ENST00000490914 SP7Q8TDD2 431 aaPredicted RBP15.88■□□□□ 0.13
SSB-211ENST00000490914 PROM2Q8N271 834 aa15.77■□□□□ 0.12
SSB-211ENST00000490914 STAG3Q9UJ98 1225 aa15.76■□□□□ 0.11
SSB-211ENST00000490914 EVX2Q03828 476 aa15.71■□□□□ 0.11
SSB-211ENST00000490914 CREBZFQ9NS37 354 aa15.66■□□□□ 0.1
SSB-211ENST00000490914 C19orf67A6NJJ6 358 aa15.65■□□□□ 0.1
SSB-211ENST00000490914 FKBP8Q14318 412 aa15.65■□□□□ 0.1
SSB-211ENST00000490914 FARP1Q9Y4F1 1045 aaPredicted RBP15.62■□□□□ 0.09
SSB-211ENST00000490914 CD44P16070 742 aaKnown RBP15.48■□□□□ 0.07
SSB-211ENST00000490914 MNX1P50219 401 aaPredicted RBP15.44■□□□□ 0.06
SSB-211ENST00000490914 GABBR2O75899 941 aa15.39■□□□□ 0.05
SSB-211ENST00000490914 NPM1P06748 294 aaKnown RBP eCLIP15.3■□□□□ 0.04
SSB-211ENST00000490914 MIER1Q8N108 512 aa15.3■□□□□ 0.04
SSB-211ENST00000490914 ZRANB1Q9UGI0 708 aa15.29■□□□□ 0.04
SSB-211ENST00000490914 PAK3O75914 559 aaPredicted RBP15.23■□□□□ 0.03
SSB-211ENST00000490914 ZNF579Q8NAF0 562 aaKnown RBP15.22■□□□□ 0.03
SSB-211ENST00000490914 PLCD3Q8N3E9 789 aa15.21■□□□□ 0.03
SSB-211ENST00000490914 PLEKHG5O94827 1062 aa15.19■□□□□ 0.02
SSB-211ENST00000490914 CLCN6P51797 869 aa15.19■□□□□ 0.02
SSB-211ENST00000490914 FBXO3Q9UK99 471 aa15.15■□□□□ 0.02
SSB-211ENST00000490914 PHF12Q96QT6 1004 aa15.14■□□□□ 0.01
SSB-211ENST00000490914 TSPYL2Q9H2G4 693 aaPredicted RBP15.1■□□□□ 0.01
SSB-211ENST00000490914 RASEFQ8IZ41 740 aa15.07■□□□□ 0
SSB-211ENST00000490914 GALR2O43603 387 aaPredicted RBP15.06■□□□□ 0
SSB-211ENST00000490914 DCBLD2Q96PD2 775 aa15.05■□□□□ -0
SSB-211ENST00000490914 POTEIP0CG38 1075 aa15.04■□□□□ -0
SSB-211ENST00000490914 VASPP50552 380 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms