RNA–Protein interactions for RNA: ENST00000490605.2

FAM178B-204, Transcript of family with sequence similarity 178 member B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FAM178B, Length 2,710 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM178B-204ENST00000490605 GTF2F1P35269 517 aaKnown RBP eCLIP19.77■□□□□ 0.769e-8■■■■■ 161.6
FAM178B-204ENST00000490605 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.9■□□□□ 0.468e-39■■■■■ 82.2
FAM178B-204ENST00000490605 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.78■□□□□ 0.125e-8■■■■■ 76.6
FAM178B-204ENST00000490605 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.44■□□□□ 0.863e-8■■■■■ 73.7
FAM178B-204ENST00000490605 FTOQ9C0B1 505 aaKnown RBP eCLIP20.06■□□□□ 0.84e-8■■■■■ 73.4
FAM178B-204ENST00000490605 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.73■□□□□ 0.591e-6■■■■■ 68.2
FAM178B-204ENST00000490605 EWSR1Q01844 656 aaKnown RBP eCLIP14.13□□□□□ -0.151e-8■■■■■ 65.9
FAM178B-204ENST00000490605 DDX21Q9NR30 783 aaKnown RBP eCLIP21.39■■□□□ 1.019e-8■■■■■ 58.5
FAM178B-204ENST00000490605 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.79■□□□□ 0.442e-12■■■■■ 57.6
FAM178B-204ENST00000490605 SF3B1O75533 1304 aaKnown RBP eCLIP17.7■□□□□ 0.422e-6■■■■■ 55.8
FAM178B-204ENST00000490605 EIF4G2P78344 907 aaKnown RBP eCLIP24.23■■□□□ 1.475e-8■■■■■ 50.4
FAM178B-204ENST00000490605 TARDBPQ13148 414 aaKnown RBP eCLIP15.95■□□□□ 0.148e-8■■■■■ 43.9
FAM178B-204ENST00000490605 UPF1Q92900 1129 aaKnown RBP eCLIP19.55■□□□□ 0.726e-7■■■■■ 40.6
FAM178B-204ENST00000490605 RBFOX2O43251 390 aaKnown RBP eCLIP13.98□□□□□ -0.171e-11■■■■■ 39.2
FAM178B-204ENST00000490605 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.39■□□□□ 0.373e-6■■■■■ 36.4
FAM178B-204ENST00000490605 GPKOWQ92917 476 aaPredicted RBP eCLIP19.77■□□□□ 0.761e-11■■■■■ 30.2
FAM178B-204ENST00000490605 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.38■□□□□ 0.376e-7■■■■■ 28.3
FAM178B-204ENST00000490605 AQRO60306 1485 aaKnown RBP eCLIP26.58■■□□□ 1.859e-9■■■■□ 24.5
FAM178B-204ENST00000490605 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.6□□□□□ -0.232e-15■■■■□ 23.2
FAM178B-204ENST00000490605 NONOQ15233 471 aaKnown RBP eCLIP19.5■□□□□ 0.712e-7■■■■□ 22.4
FAM178B-204ENST00000490605 HNRNPMP52272 730 aaKnown RBP eCLIP24.97■■□□□ 1.591e-7■■■■□ 22.3
FAM178B-204ENST00000490605 NIPBLQ6KC79 2804 aaeCLIP12.88□□□□□ -0.351e-5■■■■□ 22.3
FAM178B-204ENST00000490605 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.02■□□□□ 0.486e-7■■■■□ 21
FAM178B-204ENST00000490605 SND1Q7KZF4 910 aaKnown RBP eCLIP18.16■□□□□ 0.57e-14■■■■□ 20.8
FAM178B-204ENST00000490605 AATFQ9NY61 560 aaKnown RBP eCLIP20.21■□□□□ 0.833e-8■■■■□ 19.6
FAM178B-204ENST00000490605 HNRNPKP61978 463 aaKnown RBP eCLIP16.13■□□□□ 0.172e-7■■■■□ 19.5
FAM178B-204ENST00000490605 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.84■□□□□ 0.134e-8■■■■□ 19.4
FAM178B-204ENST00000490605 HNRNPUQ00839 825 aaKnown RBP eCLIP23.46■■□□□ 1.353e-6■■■■□ 19.3
FAM178B-204ENST00000490605 WRNQ14191 1432 aaPredicted RBP eCLIP27.94■■■□□ 2.061e-6■■■□□ 18.8
FAM178B-204ENST00000490605 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.42■□□□□ 0.382e-7■■■□□ 18.6
FAM178B-204ENST00000490605 SRSF7Q16629 238 aaKnown RBP eCLIP14.4□□□□□ -0.13e-7■■■□□ 18.5
FAM178B-204ENST00000490605 MATR3P43243 847 aaKnown RBP eCLIP18.61■□□□□ 0.576e-7■■■□□ 17.8
FAM178B-204ENST00000490605 AARSP49588 968 aaKnown RBP eCLIP18.33■□□□□ 0.522e-6■■■□□ 17.3
FAM178B-204ENST00000490605 WDR43Q15061 677 aaKnown RBP eCLIP22.94■■□□□ 1.262e-8■■■□□ 17.3
FAM178B-204ENST00000490605 EIF3GO75821 320 aaKnown RBP eCLIP15.15■□□□□ 0.026e-12■■■□□ 17.1
FAM178B-204ENST00000490605 FUSP35637 526 aaKnown RBP eCLIP11□□□□□ -0.652e-7■■■□□ 16.9
FAM178B-204ENST00000490605 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.26■□□□□ 0.513e-9■■■□□ 16.7
FAM178B-204ENST00000490605 RPS3P23396 243 aaKnown RBP eCLIP16.92■□□□□ 0.33e-23■■■□□ 16.2
FAM178B-204ENST00000490605 DDX6P26196 483 aaKnown RBP eCLIP17.12■□□□□ 0.331e-7■■■□□ 16.1
FAM178B-204ENST00000490605 ILF3Q12906 894 aaKnown RBP eCLIP16.36■□□□□ 0.218e-7■■■□□ 16
FAM178B-204ENST00000490605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.41■■□□□ 1.664e-7■■■□□ 15.8
FAM178B-204ENST00000490605 PABPC4Q13310 644 aaKnown RBP eCLIP19.15■□□□□ 0.661e-8■■■□□ 15.8
FAM178B-204ENST00000490605 DDX42Q86XP3 938 aaKnown RBP eCLIP18.19■□□□□ 0.54e-10■■■□□ 15.7
FAM178B-204ENST00000490605 TRA2AQ13595 282 aaKnown RBP eCLIP15.63■□□□□ 0.093e-8■■■□□ 15.6
FAM178B-204ENST00000490605 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.27■□□□□ 0.354e-7■■■□□ 15.4
FAM178B-204ENST00000490605 TAF15Q92804 592 aaKnown RBP eCLIP13.87□□□□□ -0.192e-7■■■□□ 15.3
FAM178B-204ENST00000490605 PCBP1Q15365 356 aaKnown RBP eCLIP18.16■□□□□ 0.51e-6■■■□□ 15.3
FAM178B-204ENST00000490605 ZNF622Q969S3 477 aaKnown RBP eCLIP20.13■□□□□ 0.811e-24■■■□□ 15.2
FAM178B-204ENST00000490605 SAFB2Q14151 953 aaKnown RBP eCLIP23.36■■□□□ 1.336e-8■■■□□ 15.2
FAM178B-204ENST00000490605 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.96■□□□□ 0.634e-7■■■□□ 15
FAM178B-204ENST00000490605 NCBP2P52298 156 aaKnown RBP eCLIP16.23■□□□□ 0.193e-10■■■□□ 15
FAM178B-204ENST00000490605 NSUN2Q08J23 767 aaKnown RBP eCLIP17.17■□□□□ 0.343e-7■■■□□ 14.9
FAM178B-204ENST00000490605 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.32■□□□□ 0.26e-7■■□□□ 14.4
FAM178B-204ENST00000490605 SMNDC1O75940 238 aaKnown RBP eCLIP17.84■□□□□ 0.451e-6■■□□□ 14.4
FAM178B-204ENST00000490605 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.94■□□□□ 0.461e-6■■□□□ 14.1
FAM178B-204ENST00000490605 SF3B4Q15427 424 aaKnown RBP eCLIP16.54■□□□□ 0.241e-7■■□□□ 14.1
FAM178B-204ENST00000490605 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20■□□□□ 0.791e-6■■□□□ 14.1
FAM178B-204ENST00000490605 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.95■□□□□ 0.462e-8■■□□□ 13.8
FAM178B-204ENST00000490605 U2AF1Q01081 240 aaKnown RBP eCLIP22.66■■□□□ 1.223e-6■■□□□ 13.7
FAM178B-204ENST00000490605 CPSF6Q16630 551 aaKnown RBP eCLIP16.75■□□□□ 0.273e-7■■□□□ 13.7
FAM178B-204ENST00000490605 LSM11P83369 360 aaKnown RBP eCLIP16.03■□□□□ 0.169e-7■■□□□ 13.3
FAM178B-204ENST00000490605 RBM22Q9NW64 420 aaKnown RBP eCLIP17.51■□□□□ 0.392e-7■■□□□ 13
FAM178B-204ENST00000490605 LARP4Q71RC2 724 aaKnown RBP eCLIP16.85■□□□□ 0.293e-8■■□□□ 12.8
FAM178B-204ENST00000490605 DDX3XO00571 662 aaKnown RBP eCLIP18.57■□□□□ 0.568e-33■■□□□ 12.8
FAM178B-204ENST00000490605 ZC3H11AO75152 810 aaKnown RBP eCLIP18.4■□□□□ 0.544e-7■■□□□ 12.7
FAM178B-204ENST00000490605 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.91■■□□□ 1.581e-6■■□□□ 12.6
FAM178B-204ENST00000490605 PTBP1P26599 531 aaKnown RBP eCLIP15.25■□□□□ 0.032e-6■■□□□ 12.4
FAM178B-204ENST00000490605 ZRANB2O95218 330 aaKnown RBP eCLIP18.96■□□□□ 0.637e-7■■□□□ 12.4
FAM178B-204ENST00000490605 EFTUD2Q15029 972 aaKnown RBP eCLIP17.7■□□□□ 0.421e-6■■□□□ 12.2
FAM178B-204ENST00000490605 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.69■□□□□ 0.582e-7■■□□□ 12.2
FAM178B-204ENST00000490605 RBM15Q96T37 977 aaKnown RBP eCLIP17.81■□□□□ 0.444e-6■■□□□ 11.9
FAM178B-204ENST00000490605 XRCC6P12956 609 aaKnown RBP eCLIP20.89■□□□□ 0.933e-11■■□□□ 11.8
FAM178B-204ENST00000490605 DDX51Q8N8A6 666 aaKnown RBP eCLIP17■□□□□ 0.311e-6■■□□□ 11.8
FAM178B-204ENST00000490605 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.87■□□□□ 0.611e-6■■□□□ 11.7
FAM178B-204ENST00000490605 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.15■□□□□ 0.665e-39■■□□□ 11.5
FAM178B-204ENST00000490605 SAFBQ15424 915 aaKnown RBP eCLIP19.8■□□□□ 0.761e-6■■□□□ 11.4
FAM178B-204ENST00000490605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.55■■□□□ 1.522e-12■□□□□ 10.8
FAM178B-204ENST00000490605 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.43■□□□□ 0.387e-7■□□□□ 10.8
FAM178B-204ENST00000490605 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.15■□□□□ 0.53e-6■□□□□ 10.7
FAM178B-204ENST00000490605 SRSF1Q07955 248 aaKnown RBP eCLIP13.81□□□□□ -0.22e-13■□□□□ 10.6
FAM178B-204ENST00000490605 U2AF2P26368 475 aaKnown RBP eCLIP19.82■□□□□ 0.763e-6■□□□□ 10.1
FAM178B-204ENST00000490605 PUM1Q14671 1186 aaKnown RBP eCLIP16.12■□□□□ 0.174e-25■□□□□ 10.1
FAM178B-204ENST00000490605 PUS1Q9Y606 427 aaKnown RBP eCLIP14.43□□□□□ -0.16e-7■□□□□ 9.9
FAM178B-204ENST00000490605 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.82■□□□□ 0.761e-12■□□□□ 9.7
FAM178B-204ENST00000490605 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.1■□□□□ 0.336e-13■□□□□ 9.4
FAM178B-204ENST00000490605 METAP2P50579 478 aaKnown RBP eCLIP20.09■□□□□ 0.813e-10■□□□□ 9.1
FAM178B-204ENST00000490605 TIA1P31483 386 aaKnown RBP eCLIP16.46■□□□□ 0.231e-6■□□□□ 9.1
FAM178B-204ENST00000490605 AGGF1Q8N302 714 aaeCLIP17.7■□□□□ 0.425e-12■□□□□ 9.1
FAM178B-204ENST00000490605 YBX3P16989 372 aaKnown RBP eCLIP19.27■□□□□ 0.681e-26■□□□□ 9.1
FAM178B-204ENST00000490605 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.56■□□□□ 0.881e-15■□□□□ 8.7
FAM178B-204ENST00000490605 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.63■□□□□ 0.099e-7■□□□□ 8.2
FAM178B-204ENST00000490605 NOLC1Q14978 699 aaKnown RBP eCLIP19.72■□□□□ 0.752e-16■□□□□ 8.1
Retrieved 92 of 92 RNA–protein pairs in 93.5 ms