RNA–Protein interactions for RNA: ENST00000490439.1

NUP205-208, Transcript of nucleoporin 205, humanhuman

TSL 3

Gene NUP205, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP205-208ENST00000490439 AEBP2Q6ZN18 517 aaPredicted RBP33.94■■■■□ 3.02
NUP205-208ENST00000490439 CHIC1Q5VXU3 224 aa31.83■■■□□ 2.69
NUP205-208ENST00000490439 SENP3Q9H4L4 574 aaPredicted RBP29.1■■■□□ 2.25
NUP205-208ENST00000490439 PHF23Q9BUL5 403 aaPredicted RBP28.66■■■□□ 2.18
NUP205-208ENST00000490439 FOXD1Q16676 465 aa27.14■■□□□ 1.94
NUP205-208ENST00000490439 POTEDQ86YR6 584 aa25.71■■□□□ 1.71
NUP205-208ENST00000490439 MSH5O43196 834 aa25.61■■□□□ 1.69
NUP205-208ENST00000490439 PIAS4Q8N2W9 510 aaPredicted RBP25.35■■□□□ 1.65
NUP205-208ENST00000490439 PLPPR3Q6T4P5 718 aa25.3■■□□□ 1.64
NUP205-208ENST00000490439 PPP6R1Q9UPN7 881 aa25.03■■□□□ 1.6
NUP205-208ENST00000490439 ADRA2BP18089 450 aa24.99■■□□□ 1.59
NUP205-208ENST00000490439 MAPK8IP2Q13387 824 aaPredicted RBP23.08■■□□□ 1.29
NUP205-208ENST00000490439 DMRT2Q9Y5R5 561 aa22.96■■□□□ 1.27
NUP205-208ENST00000490439 SCAF1Q9H7N4 1312 aaKnown RBP22.91■■□□□ 1.26
NUP205-208ENST00000490439 CACNB1Q02641 598 aaPredicted RBP22.32■■□□□ 1.16
NUP205-208ENST00000490439 DCAF8L1A6NGE4 600 aa22.27■■□□□ 1.16
NUP205-208ENST00000490439 PPP4R3CPQ6ZMV5 832 aa22.12■■□□□ 1.13
NUP205-208ENST00000490439 HOXD11P31277 338 aaPredicted RBP21.91■■□□□ 1.1
NUP205-208ENST00000490439 CNKSR2Q8WXI2 1034 aa21.8■■□□□ 1.08
NUP205-208ENST00000490439 RNF39Q9H2S5 420 aa21.76■■□□□ 1.07
NUP205-208ENST00000490439 RNF216Q9NWF9 866 aaPredicted RBP21.68■■□□□ 1.06
NUP205-208ENST00000490439 C1QBPQ07021 282 aaKnown RBP21.45■■□□□ 1.02
NUP205-208ENST00000490439 NCBP3Q53F19 620 aaKnown RBP21.19■□□□□ 0.98
NUP205-208ENST00000490439 DNAJC5BQ9UF47 199 aa21.18■□□□□ 0.98
NUP205-208ENST00000490439 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.05■□□□□ 0.96
NUP205-208ENST00000490439 NPM3O75607 178 aaKnown RBP20.81■□□□□ 0.92
NUP205-208ENST00000490439 U3KPZ7 1027 aaPredicted RBP20.44■□□□□ 0.86
NUP205-208ENST00000490439 CAPN15O75808 1086 aa20.4■□□□□ 0.86
NUP205-208ENST00000490439 SPINK5Q9NQ38 1064 aaPredicted RBP20.31■□□□□ 0.84
NUP205-208ENST00000490439 DSG3P32926 999 aa20.25■□□□□ 0.83
NUP205-208ENST00000490439 POTEHQ6S545 545 aa20.09■□□□□ 0.81
NUP205-208ENST00000490439 KCNA4P22459 653 aa20.04■□□□□ 0.8
NUP205-208ENST00000490439 TRHP20396 242 aaPredicted RBP19.98■□□□□ 0.79
NUP205-208ENST00000490439 SLC4A2P04920 1241 aa19.94■□□□□ 0.78
NUP205-208ENST00000490439 APLP2Q06481 763 aa19.92■□□□□ 0.78
NUP205-208ENST00000490439 ABCB7O75027 752 aa19.87■□□□□ 0.77
NUP205-208ENST00000490439 ZNF219Q9P2Y4 722 aaPredicted RBP19.84■□□□□ 0.77
NUP205-208ENST00000490439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.78■□□□□ 0.76
NUP205-208ENST00000490439 HNRNPUL2Q1KMD3 747 aaKnown RBP19.78■□□□□ 0.76
NUP205-208ENST00000490439 SAMD1Q6SPF0 538 aaPredicted RBP19.63■□□□□ 0.73
NUP205-208ENST00000490439 RBM42Q9BTD8 480 aaKnown RBP19.39■□□□□ 0.69
NUP205-208ENST00000490439 MYCNP04198 464 aaPredicted RBP19.28■□□□□ 0.68
NUP205-208ENST00000490439 POLA2Q14181 598 aa19.28■□□□□ 0.68
NUP205-208ENST00000490439 CHRDL2Q6WN34 429 aa19.13■□□□□ 0.65
NUP205-208ENST00000490439 SLC4A1APQ9BWU0 796 aaKnown RBP18.89■□□□□ 0.61
NUP205-208ENST00000490439 FOXD4L1Q9NU39 408 aa18.85■□□□□ 0.61
NUP205-208ENST00000490439 ATF5Q9Y2D1 282 aaPredicted RBP18.84■□□□□ 0.61
NUP205-208ENST00000490439 ZBTB12Q9Y330 459 aaPredicted RBP18.84■□□□□ 0.61
NUP205-208ENST00000490439 AKT1S1Q96B36 256 aa18.82■□□□□ 0.6
NUP205-208ENST00000490439 NISCHQ9Y2I1 1504 aa18.78■□□□□ 0.6
NUP205-208ENST00000490439 OSCARQ8IYS5 282 aa18.68■□□□□ 0.58
NUP205-208ENST00000490439 REM2Q8IYK8 340 aaPredicted RBP18.66■□□□□ 0.58
NUP205-208ENST00000490439 SP7Q8TDD2 431 aaPredicted RBP18.63■□□□□ 0.57
NUP205-208ENST00000490439 PIP4P2Q8N4L2 257 aa18.56■□□□□ 0.56
NUP205-208ENST00000490439 PITPNM1O00562 1244 aa18.46■□□□□ 0.55
NUP205-208ENST00000490439 HAX1O00165 279 aa18.45■□□□□ 0.54
NUP205-208ENST00000490439 ZBTB22O15209 634 aa18.36■□□□□ 0.53
NUP205-208ENST00000490439 FXR2P51116 673 aaKnown RBP eCLIP18.34■□□□□ 0.534e-6■■■□□ 16
NUP205-208ENST00000490439 ATXN8OSP0DMR3 200 aa18.26■□□□□ 0.51
NUP205-208ENST00000490439 FBLN2P98095 1184 aa18.25■□□□□ 0.51
NUP205-208ENST00000490439 SPDYE2BA6NHP3 402 aa18.19■□□□□ 0.5
NUP205-208ENST00000490439 SPDYE6P0CI01 402 aa18.19■□□□□ 0.5
NUP205-208ENST00000490439 SPDYE2Q495Y8 402 aa18.19■□□□□ 0.5
NUP205-208ENST00000490439 CLEC11AQ9Y240 323 aa18.11■□□□□ 0.49
NUP205-208ENST00000490439 EVX2Q03828 476 aa18.05■□□□□ 0.48
NUP205-208ENST00000490439 PRKAR2AP13861 404 aaKnown RBP18.03■□□□□ 0.48
NUP205-208ENST00000490439 SPDYE1Q8NFV5 336 aaPredicted RBP18.03■□□□□ 0.48
NUP205-208ENST00000490439 ZNF692Q9BU19 519 aaPredicted RBP17.98■□□□□ 0.47
NUP205-208ENST00000490439 MKRN4PQ13434 485 aaPredicted RBP17.92■□□□□ 0.46
NUP205-208ENST00000490439 SSUH2Q9Y2M2 353 aa17.84■□□□□ 0.45
NUP205-208ENST00000490439 C19orf67A6NJJ6 358 aa17.78■□□□□ 0.44
NUP205-208ENST00000490439 CHADLQ6NUI6 762 aa17.74■□□□□ 0.43
NUP205-208ENST00000490439 PRR29P0C7W0 189 aa17.7■□□□□ 0.42
NUP205-208ENST00000490439 PABPN1Q86U42 306 aaKnown RBP eCLIP17.68■□□□□ 0.42
NUP205-208ENST00000490439 GABBR2O75899 941 aa17.67■□□□□ 0.42
NUP205-208ENST00000490439 LHX8Q68G74 356 aa17.5■□□□□ 0.39
NUP205-208ENST00000490439 CD44P16070 742 aaKnown RBP17.43■□□□□ 0.38
NUP205-208ENST00000490439 FARP1Q9Y4F1 1045 aaPredicted RBP17.4■□□□□ 0.38
NUP205-208ENST00000490439 POTEIP0CG38 1075 aa17.22■□□□□ 0.35
NUP205-208ENST00000490439 CLCN6P51797 869 aa17.21■□□□□ 0.35
NUP205-208ENST00000490439 DCBLD2Q96PD2 775 aa17.2■□□□□ 0.34
NUP205-208ENST00000490439 CSRNP3Q8WYN3 585 aa17.15■□□□□ 0.34
NUP205-208ENST00000490439 ZRANB1Q9UGI0 708 aa17.14■□□□□ 0.33
NUP205-208ENST00000490439 ABCC9O60706 1549 aa17.11■□□□□ 0.33
NUP205-208ENST00000490439 STAG3Q9UJ98 1225 aa17.1■□□□□ 0.33
NUP205-208ENST00000490439 ZNF579Q8NAF0 562 aaKnown RBP17.06■□□□□ 0.32
NUP205-208ENST00000490439 CREBZFQ9NS37 354 aa17.06■□□□□ 0.32
NUP205-208ENST00000490439 SPDYE4A6NLX3 237 aa16.96■□□□□ 0.31
NUP205-208ENST00000490439 PAK3O75914 559 aaPredicted RBP16.96■□□□□ 0.31
NUP205-208ENST00000490439 GALR2O43603 387 aaPredicted RBP16.93■□□□□ 0.3
NUP205-208ENST00000490439 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
NUP205-208ENST00000490439 EHMT2Q96KQ7 1210 aa16.85■□□□□ 0.29
NUP205-208ENST00000490439 PLSCR2Q9NRY7 297 aa16.85■□□□□ 0.29
NUP205-208ENST00000490439 PHF12Q96QT6 1004 aa16.84■□□□□ 0.29
NUP205-208ENST00000490439 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.28
NUP205-208ENST00000490439 OTUD5Q96G74 571 aa16.71■□□□□ 0.27
NUP205-208ENST00000490439 POTEB2H3BUK9 544 aa16.66■□□□□ 0.26
NUP205-208ENST00000490439 MNX1P50219 401 aaPredicted RBP16.64■□□□□ 0.25
NUP205-208ENST00000490439 PELP1Q8IZL8 1130 aaKnown RBP16.61■□□□□ 0.25
NUP205-208ENST00000490439 MS4A3Q96HJ5 214 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms