RNA–Protein interactions for RNA: ENST00000490331.2

SMIM19-205, Transcript of small integral membrane protein 19, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM19, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-205ENST00000490331 AEBP2Q6ZN18 517 aaPredicted RBP30.01■■■□□ 2.39
SMIM19-205ENST00000490331 CHIC1Q5VXU3 224 aa28.08■■■□□ 2.09
SMIM19-205ENST00000490331 SENP3Q9H4L4 574 aaPredicted RBP25.64■■□□□ 1.7
SMIM19-205ENST00000490331 PHF23Q9BUL5 403 aaPredicted RBP25.25■■□□□ 1.63
SMIM19-205ENST00000490331 FOXD1Q16676 465 aa23.97■■□□□ 1.43
SMIM19-205ENST00000490331 NISCHQ9Y2I1 1504 aa23.41■■□□□ 1.34
SMIM19-205ENST00000490331 POTEDQ86YR6 584 aa22.75■■□□□ 1.23
SMIM19-205ENST00000490331 MSH5O43196 834 aa22.57■■□□□ 1.2
SMIM19-205ENST00000490331 PIAS4Q8N2W9 510 aaPredicted RBP22.32■■□□□ 1.16
SMIM19-205ENST00000490331 PLPPR3Q6T4P5 718 aa22.24■■□□□ 1.15
SMIM19-205ENST00000490331 PPP6R1Q9UPN7 881 aa22.1■■□□□ 1.13
SMIM19-205ENST00000490331 ADRA2BP18089 450 aa22.02■■□□□ 1.12
SMIM19-205ENST00000490331 ABCC9O60706 1549 aa21.35■■□□□ 1.01
SMIM19-205ENST00000490331 CCDC180Q9P1Z9 1646 aa21.06■□□□□ 0.96
SMIM19-205ENST00000490331 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
SMIM19-205ENST00000490331 MAPK8IP2Q13387 824 aaPredicted RBP20.35■□□□□ 0.85
SMIM19-205ENST00000490331 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.84
SMIM19-205ENST00000490331 RB1CC1Q8TDY2 1594 aa20.18■□□□□ 0.82
SMIM19-205ENST00000490331 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
SMIM19-205ENST00000490331 NACADO15069 1562 aa20.03■□□□□ 0.8
SMIM19-205ENST00000490331 PABPN1Q86U42 306 aaKnown RBP eCLIP19.85■□□□□ 0.77
SMIM19-205ENST00000490331 MYO15BQ96JP2 1530 aa19.74■□□□□ 0.75
SMIM19-205ENST00000490331 DCAF8L2P0C7V8 631 aa19.71■□□□□ 0.75
SMIM19-205ENST00000490331 BICRAQ9NZM4 1560 aa19.7■□□□□ 0.74
SMIM19-205ENST00000490331 UNC13AQ9UPW8 1703 aa19.67■□□□□ 0.74
SMIM19-205ENST00000490331 CACNB1Q02641 598 aaPredicted RBP19.65■□□□□ 0.74
SMIM19-205ENST00000490331 DCAF8L1A6NGE4 600 aa19.53■□□□□ 0.72
SMIM19-205ENST00000490331 PPP4R3CPQ6ZMV5 832 aa19.46■□□□□ 0.71
SMIM19-205ENST00000490331 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
SMIM19-205ENST00000490331 DCAF1Q9Y4B6 1507 aa19.36■□□□□ 0.69
SMIM19-205ENST00000490331 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
SMIM19-205ENST00000490331 HOXD11P31277 338 aaPredicted RBP19.34■□□□□ 0.69
SMIM19-205ENST00000490331 CECR2Q9BXF3 1484 aa19.29■□□□□ 0.68
SMIM19-205ENST00000490331 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
SMIM19-205ENST00000490331 RNF39Q9H2S5 420 aa19.22■□□□□ 0.67
SMIM19-205ENST00000490331 EIF4G1Q04637 1599 aaKnown RBP19.19■□□□□ 0.66
SMIM19-205ENST00000490331 CNKSR2Q8WXI2 1034 aa19.17■□□□□ 0.66
SMIM19-205ENST00000490331 SCRIBQ14160 1630 aa19.14■□□□□ 0.65
SMIM19-205ENST00000490331 RNF216Q9NWF9 866 aaPredicted RBP19.1■□□□□ 0.65
SMIM19-205ENST00000490331 DNAJC5Q9H3Z4 198 aa18.93■□□□□ 0.62
SMIM19-205ENST00000490331 C1QBPQ07021 282 aaKnown RBP18.9■□□□□ 0.62
SMIM19-205ENST00000490331 NCBP3Q53F19 620 aaKnown RBP18.57■□□□□ 0.56
SMIM19-205ENST00000490331 CUX2O14529 1486 aa18.56■□□□□ 0.56
SMIM19-205ENST00000490331 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
SMIM19-205ENST00000490331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.48■□□□□ 0.55
SMIM19-205ENST00000490331 ATAD2BQ9ULI0 1458 aa18.43■□□□□ 0.54
SMIM19-205ENST00000490331 ERCC6Q03468 1493 aa18.4■□□□□ 0.54
SMIM19-205ENST00000490331 HMGXB3Q12766 1538 aa18.33■□□□□ 0.53
SMIM19-205ENST00000490331 NPM3O75607 178 aaKnown RBP18.33■□□□□ 0.52
SMIM19-205ENST00000490331 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
SMIM19-205ENST00000490331 NESP48681 1621 aa18.28■□□□□ 0.52
SMIM19-205ENST00000490331 SMARCA4P51532 1647 aa18.27■□□□□ 0.52
SMIM19-205ENST00000490331 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
SMIM19-205ENST00000490331 BAZ1BQ9UIG0 1483 aaKnown RBP18.16■□□□□ 0.5
SMIM19-205ENST00000490331 THOC2Q8NI27 1593 aaKnown RBP18.16■□□□□ 0.5
SMIM19-205ENST00000490331 BAZ1AQ9NRL2 1556 aaPredicted RBP18.14■□□□□ 0.49
SMIM19-205ENST00000490331 LAMC3Q9Y6N6 1575 aa18.09■□□□□ 0.49
SMIM19-205ENST00000490331 U3KPZ7 1027 aaPredicted RBP18.04■□□□□ 0.48
SMIM19-205ENST00000490331 MROH2BQ7Z745 1585 aa18.02■□□□□ 0.48
SMIM19-205ENST00000490331 PDS5BQ9NTI5 1447 aa18.01■□□□□ 0.47
SMIM19-205ENST00000490331 KIF21AQ7Z4S6 1674 aa17.95■□□□□ 0.46
SMIM19-205ENST00000490331 CADPSQ9ULU8 1353 aa17.94■□□□□ 0.46
SMIM19-205ENST00000490331 CAPN15O75808 1086 aa17.92■□□□□ 0.46
SMIM19-205ENST00000490331 SPINK5Q9NQ38 1064 aaPredicted RBP17.92■□□□□ 0.46
SMIM19-205ENST00000490331 MRC2Q9UBG0 1479 aa17.88■□□□□ 0.45
SMIM19-205ENST00000490331 DSG3P32926 999 aa17.87■□□□□ 0.45
SMIM19-205ENST00000490331 WDR62O43379 1518 aa17.87■□□□□ 0.45
SMIM19-205ENST00000490331 KCNA4P22459 653 aa17.85■□□□□ 0.45
SMIM19-205ENST00000490331 TRIM41Q8WV44 630 aa17.83■□□□□ 0.44
SMIM19-205ENST00000490331 POTEHQ6S545 545 aa17.75■□□□□ 0.43
SMIM19-205ENST00000490331 WIZO95785 1651 aa17.72■□□□□ 0.43
SMIM19-205ENST00000490331 CEP164Q9UPV0 1460 aa17.71■□□□□ 0.43
SMIM19-205ENST00000490331 CFTRP13569 1480 aa17.69■□□□□ 0.42
SMIM19-205ENST00000490331 FANCD2Q9BXW9 1451 aa17.69■□□□□ 0.42
SMIM19-205ENST00000490331 OSCARQ8IYS5 282 aa17.64■□□□□ 0.41
SMIM19-205ENST00000490331 SLC4A2P04920 1241 aa17.6■□□□□ 0.41
SMIM19-205ENST00000490331 URB2Q14146 1524 aaKnown RBP17.6■□□□□ 0.41
SMIM19-205ENST00000490331 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
SMIM19-205ENST00000490331 TRHP20396 242 aaPredicted RBP17.53■□□□□ 0.4
SMIM19-205ENST00000490331 TOP2AP11388 1531 aaKnown RBP17.52■□□□□ 0.4
SMIM19-205ENST00000490331 ABCB7O75027 752 aa17.49■□□□□ 0.39
SMIM19-205ENST00000490331 APLP2Q06481 763 aa17.46■□□□□ 0.39
SMIM19-205ENST00000490331 ZNF219Q9P2Y4 722 aaPredicted RBP17.45■□□□□ 0.38
SMIM19-205ENST00000490331 ZNF608Q9ULD9 1512 aaPredicted RBP17.43■□□□□ 0.38
SMIM19-205ENST00000490331 RIMBP3CA6NJZ7 1639 aa17.41■□□□□ 0.38
SMIM19-205ENST00000490331 RIMBP3BA6NNM3 1639 aa17.41■□□□□ 0.38
SMIM19-205ENST00000490331 RIMBP3Q9UFD9 1639 aa17.41■□□□□ 0.38
SMIM19-205ENST00000490331 IFT140Q96RY7 1462 aa17.41■□□□□ 0.38
SMIM19-205ENST00000490331 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
SMIM19-205ENST00000490331 CCDC88BA6NC98 1476 aa17.35■□□□□ 0.37
SMIM19-205ENST00000490331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.34■□□□□ 0.37
SMIM19-205ENST00000490331 HNRNPUL2Q1KMD3 747 aaKnown RBP17.34■□□□□ 0.37
SMIM19-205ENST00000490331 TOPBP1Q92547 1522 aa17.34■□□□□ 0.37
SMIM19-205ENST00000490331 PRDM2Q13029 1718 aa17.31■□□□□ 0.36
SMIM19-205ENST00000490331 ABCC8Q09428 1581 aa17.27■□□□□ 0.35
SMIM19-205ENST00000490331 EIF4G3O43432 1585 aaKnown RBP17.26■□□□□ 0.35
SMIM19-205ENST00000490331 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
SMIM19-205ENST00000490331 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
SMIM19-205ENST00000490331 CYB5RLQ6IPT4 315 aa17.22■□□□□ 0.35
SMIM19-205ENST00000490331 AQRO60306 1485 aaKnown RBP eCLIP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms