RNA–Protein interactions for RNA: ENST00000490308.1

EPB41-212, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-212ENST00000490308 AEBP2Q6ZN18 517 aaPredicted RBP9.03□□□□□ -0.96
EPB41-212ENST00000490308 CHIC1Q5VXU3 224 aa8.35□□□□□ -1.07
EPB41-212ENST00000490308 SENP3Q9H4L4 574 aaPredicted RBP7.61□□□□□ -1.19
EPB41-212ENST00000490308 PHF23Q9BUL5 403 aaPredicted RBP7.56□□□□□ -1.2
EPB41-212ENST00000490308 POTEDQ86YR6 584 aa7.44□□□□□ -1.22
EPB41-212ENST00000490308 FOXD1Q16676 465 aa7.2□□□□□ -1.26
EPB41-212ENST00000490308 PLPPR3Q6T4P5 718 aa6.77□□□□□ -1.33
EPB41-212ENST00000490308 MSH5O43196 834 aa6.7□□□□□ -1.34
EPB41-212ENST00000490308 PPP6R1Q9UPN7 881 aa6.66□□□□□ -1.34
EPB41-212ENST00000490308 PIAS4Q8N2W9 510 aaPredicted RBP6.63□□□□□ -1.35
EPB41-212ENST00000490308 ADRA2BP18089 450 aa6.59□□□□□ -1.35
EPB41-212ENST00000490308 EHMT2Q96KQ7 1210 aa6.24□□□□□ -1.41
EPB41-212ENST00000490308 SLC24A1O60721 1099 aa6.13□□□□□ -1.43
EPB41-212ENST00000490308 MAPK8IP2Q13387 824 aaPredicted RBP6.13□□□□□ -1.43
EPB41-212ENST00000490308 KCNA4P22459 653 aa6.06□□□□□ -1.44
EPB41-212ENST00000490308 DMRT2Q9Y5R5 561 aa6.04□□□□□ -1.44
EPB41-212ENST00000490308 PPP4R3CPQ6ZMV5 832 aa6□□□□□ -1.45
EPB41-212ENST00000490308 AMER1Q5JTC6 1135 aaPredicted RBP5.93□□□□□ -1.46
EPB41-212ENST00000490308 CSRNP3Q8WYN3 585 aa5.92□□□□□ -1.46
EPB41-212ENST00000490308 SLC4A1APQ9BWU0 796 aaKnown RBP5.91□□□□□ -1.46
EPB41-212ENST00000490308 CACNB1Q02641 598 aaPredicted RBP5.9□□□□□ -1.46
EPB41-212ENST00000490308 SCAF1Q9H7N4 1312 aaKnown RBP5.89□□□□□ -1.47
EPB41-212ENST00000490308 NCBP3Q53F19 620 aaKnown RBP5.87□□□□□ -1.47
EPB41-212ENST00000490308 NPM3O75607 178 aaKnown RBP5.81□□□□□ -1.48
EPB41-212ENST00000490308 CNKSR2Q8WXI2 1034 aa5.78□□□□□ -1.48
EPB41-212ENST00000490308 DCAF8L1A6NGE4 600 aa5.77□□□□□ -1.49
EPB41-212ENST00000490308 HOXD11P31277 338 aaPredicted RBP5.77□□□□□ -1.49
EPB41-212ENST00000490308 RNF39Q9H2S5 420 aa5.77□□□□□ -1.49
EPB41-212ENST00000490308 RTN4Q9NQC3 1192 aaKnown RBP5.73□□□□□ -1.49
EPB41-212ENST00000490308 POTEHQ6S545 545 aa5.71□□□□□ -1.5
EPB41-212ENST00000490308 RNF216Q9NWF9 866 aaPredicted RBP5.64□□□□□ -1.51
EPB41-212ENST00000490308 C1QBPQ07021 282 aaKnown RBP5.62□□□□□ -1.51
EPB41-212ENST00000490308 ZBTB22O15209 634 aa5.58□□□□□ -1.52
EPB41-212ENST00000490308 DNAJC5BQ9UF47 199 aa5.55□□□□□ -1.52
EPB41-212ENST00000490308 FOXD4L1Q9NU39 408 aa5.51□□□□□ -1.53
EPB41-212ENST00000490308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.45□□□□□ -1.546e-19■■□□□ 13.7
EPB41-212ENST00000490308 SLC4A2P04920 1241 aa5.44□□□□□ -1.54
EPB41-212ENST00000490308 BCANQ96GW7 911 aa5.43□□□□□ -1.54
EPB41-212ENST00000490308 FKBP8Q14318 412 aa5.38□□□□□ -1.55
EPB41-212ENST00000490308 SPINK5Q9NQ38 1064 aaPredicted RBP5.37□□□□□ -1.55
EPB41-212ENST00000490308 U3KPZ7 1027 aaPredicted RBP5.37□□□□□ -1.55
EPB41-212ENST00000490308 MYCNP04198 464 aaPredicted RBP5.36□□□□□ -1.55
EPB41-212ENST00000490308 PLCB2Q00722 1185 aa5.36□□□□□ -1.55
EPB41-212ENST00000490308 ERICH6Q7L0X2 663 aa5.36□□□□□ -1.55
EPB41-212ENST00000490308 ATXN8OSP0DMR3 200 aa5.35□□□□□ -1.55
EPB41-212ENST00000490308 DSG3P32926 999 aa5.35□□□□□ -1.55
EPB41-212ENST00000490308 CAPN15O75808 1086 aa5.3□□□□□ -1.56
EPB41-212ENST00000490308 DAXXQ9UER7 740 aaPredicted RBP5.29□□□□□ -1.56
EPB41-212ENST00000490308 VSIG10Q8N0Z9 540 aa5.28□□□□□ -1.56
EPB41-212ENST00000490308 TAOK2Q9UL54 1235 aa5.28□□□□□ -1.56
EPB41-212ENST00000490308 HAP1P54257 671 aaPredicted RBP5.27□□□□□ -1.57
EPB41-212ENST00000490308 ARXQ96QS3 562 aa5.26□□□□□ -1.57
EPB41-212ENST00000490308 FBXO3Q9UK99 471 aa5.24□□□□□ -1.57
EPB41-212ENST00000490308 ATF5Q9Y2D1 282 aaPredicted RBP5.23□□□□□ -1.57
EPB41-212ENST00000490308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.21□□□□□ -1.58
EPB41-212ENST00000490308 HNRNPUL2Q1KMD3 747 aaKnown RBP5.21□□□□□ -1.58
EPB41-212ENST00000490308 SAMD1Q6SPF0 538 aaPredicted RBP5.21□□□□□ -1.58
EPB41-212ENST00000490308 ABCB7O75027 752 aa5.2□□□□□ -1.58
EPB41-212ENST00000490308 TRHP20396 242 aaPredicted RBP5.18□□□□□ -1.58
EPB41-212ENST00000490308 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.17□□□□□ -1.58
EPB41-212ENST00000490308 PRKCSHP14314 528 aaPredicted RBP5.16□□□□□ -1.58
EPB41-212ENST00000490308 TPRNQ4KMQ1 711 aa5.16□□□□□ -1.58
EPB41-212ENST00000490308 DCAF8L2P0C7V8 631 aa5.15□□□□□ -1.59
EPB41-212ENST00000490308 APLP2Q06481 763 aa5.13□□□□□ -1.59
EPB41-212ENST00000490308 ZNF219Q9P2Y4 722 aaPredicted RBP5.11□□□□□ -1.59
EPB41-212ENST00000490308 HOMEZQ8IX15 550 aa5.1□□□□□ -1.59
EPB41-212ENST00000490308 BBXQ8WY36 941 aaPredicted RBP5.07□□□□□ -1.6
EPB41-212ENST00000490308 GTF3C3Q9Y5Q9 886 aa5.06□□□□□ -1.6
EPB41-212ENST00000490308 NBR1Q14596 966 aa5.05□□□□□ -1.6
EPB41-212ENST00000490308 TULP1O00294 542 aaPredicted RBP5.04□□□□□ -1.6
EPB41-212ENST00000490308 RANGAP1P46060 587 aaPredicted RBP5.04□□□□□ -1.6
EPB41-212ENST00000490308 CHRDL2Q6WN34 429 aa5.04□□□□□ -1.6
EPB41-212ENST00000490308 POLA2Q14181 598 aa5.03□□□□□ -1.6
EPB41-212ENST00000490308 TIMELESSQ9UNS1 1208 aa5.03□□□□□ -1.6
EPB41-212ENST00000490308 SP7Q8TDD2 431 aaPredicted RBP5.02□□□□□ -1.61
EPB41-212ENST00000490308 VASPP50552 380 aaPredicted RBP5□□□□□ -1.61
EPB41-212ENST00000490308 MKRN4PQ13434 485 aaPredicted RBP5□□□□□ -1.61
EPB41-212ENST00000490308 RBM42Q9BTD8 480 aaKnown RBP5□□□□□ -1.61
EPB41-212ENST00000490308 PLSCR2Q9NRY7 297 aa4.99□□□□□ -1.61
EPB41-212ENST00000490308 FBLN2P98095 1184 aa4.98□□□□□ -1.61
EPB41-212ENST00000490308 TMEM132AQ24JP5 1023 aa4.98□□□□□ -1.61
EPB41-212ENST00000490308 PAXIP1Q6ZW49 1069 aaPredicted RBP4.98□□□□□ -1.61
EPB41-212ENST00000490308 SPRYD3Q8NCJ5 442 aa4.98□□□□□ -1.61
EPB41-212ENST00000490308 SPDYE4A6NLX3 237 aa4.96□□□□□ -1.62
EPB41-212ENST00000490308 CFAP44Q96MT7 982 aa4.96□□□□□ -1.62
EPB41-212ENST00000490308 KDM2AQ9Y2K7 1162 aa4.96□□□□□ -1.62
EPB41-212ENST00000490308 C14orf37Q86TY3 774 aa4.94□□□□□ -1.62
EPB41-212ENST00000490308 PKD2Q13563 968 aa4.92□□□□□ -1.62
EPB41-212ENST00000490308 PIP4P2Q8N4L2 257 aa4.91□□□□□ -1.62
EPB41-212ENST00000490308 AKT1S1Q96B36 256 aa4.91□□□□□ -1.62
EPB41-212ENST00000490308 ZBTB12Q9Y330 459 aaPredicted RBP4.91□□□□□ -1.62
EPB41-212ENST00000490308 ECM2O94769 699 aaPredicted RBP4.9□□□□□ -1.63
EPB41-212ENST00000490308 IFNLR1Q8IU57 520 aaPredicted RBP4.9□□□□□ -1.63
EPB41-212ENST00000490308 REM2Q8IYK8 340 aaPredicted RBP4.89□□□□□ -1.63
EPB41-212ENST00000490308 PROM2Q8N271 834 aa4.89□□□□□ -1.63
EPB41-212ENST00000490308 SPOCK2Q92563 424 aa4.88□□□□□ -1.63
EPB41-212ENST00000490308 EVX2Q03828 476 aa4.87□□□□□ -1.63
EPB41-212ENST00000490308 OSCARQ8IYS5 282 aa4.87□□□□□ -1.63
EPB41-212ENST00000490308 KLHL34Q8N239 644 aa4.86□□□□□ -1.63
EPB41-212ENST00000490308 PITPNM1O00562 1244 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms