RNA–Protein interactions for RNA: ENST00000490198.5

MTA1-213, Transcript of metastasis associated 1, humanhuman

TSL 3

Gene MTA1, Length 814 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-213ENST00000490198 NISCHQ9Y2I1 1504 aa51.06■■■■■ 5.76
MTA1-213ENST00000490198 ABCC9O60706 1549 aa45.81■■■■■ 4.92
MTA1-213ENST00000490198 CCDC180Q9P1Z9 1646 aa45.8■■■■■ 4.92
MTA1-213ENST00000490198 RB1CC1Q8TDY2 1594 aa43.61■■■■■ 4.57
MTA1-213ENST00000490198 NACADO15069 1562 aa43.31■■■■■ 4.52
MTA1-213ENST00000490198 DCAF8L2P0C7V8 631 aa43.17■■■■■ 4.5
MTA1-213ENST00000490198 DNAJC5BQ9UF47 199 aa42.96■■■■■ 4.47
MTA1-213ENST00000490198 MYO15BQ96JP2 1530 aa42.7■■■■■ 4.43
MTA1-213ENST00000490198 PABPN1Q86U42 306 aaKnown RBP eCLIP42.68■■■■■ 4.423e-6■■■□□ 16.5
MTA1-213ENST00000490198 UNC13AQ9UPW8 1703 aa42.62■■■■■ 4.41
MTA1-213ENST00000490198 BICRAQ9NZM4 1560 aa42.31■■■■■ 4.36
MTA1-213ENST00000490198 ZCCHC6Q5VYS8 1495 aaKnown RBP42.3■■■■■ 4.36
MTA1-213ENST00000490198 DCAF1Q9Y4B6 1507 aa42.16■■■■■ 4.34
MTA1-213ENST00000490198 SCRIBQ14160 1630 aa41.75■■■■■ 4.27
MTA1-213ENST00000490198 SHROOM4Q9ULL8 1493 aa41.73■■■■■ 4.27
MTA1-213ENST00000490198 CC2D2AQ9P2K1 1620 aa41.37■■■■■ 4.21
MTA1-213ENST00000490198 EIF4G1Q04637 1599 aaKnown RBP41.29■■■■■ 4.2
MTA1-213ENST00000490198 CECR2Q9BXF3 1484 aa41.26■■■■■ 4.2
MTA1-213ENST00000490198 NCAPD3P42695 1498 aa39.98■■■■□ 3.99
MTA1-213ENST00000490198 ATAD2BQ9ULI0 1458 aa39.87■■■■□ 3.97
MTA1-213ENST00000490198 SMARCA4P51532 1647 aa39.82■■■■□ 3.96
MTA1-213ENST00000490198 SMARCA2P51531 1590 aa39.76■■■■□ 3.95
MTA1-213ENST00000490198 HMGXB3Q12766 1538 aa39.67■■■■□ 3.94
MTA1-213ENST00000490198 BAZ1AQ9NRL2 1556 aaPredicted RBP39.63■■■■□ 3.94
MTA1-213ENST00000490198 ERCC6Q03468 1493 aa39.56■■■■□ 3.92
MTA1-213ENST00000490198 BAZ1BQ9UIG0 1483 aaKnown RBP39.49■■■■□ 3.91
MTA1-213ENST00000490198 CUX2O14529 1486 aa39.45■■■■□ 3.91
MTA1-213ENST00000490198 DNAJC5Q9H3Z4 198 aa39.44■■■■□ 3.9
MTA1-213ENST00000490198 PEG3Q9GZU2 1588 aa39.42■■■■□ 3.9
MTA1-213ENST00000490198 MROH2BQ7Z745 1585 aa39.35■■■■□ 3.89
MTA1-213ENST00000490198 NESP48681 1621 aa39.35■■■■□ 3.89
MTA1-213ENST00000490198 LAMC3Q9Y6N6 1575 aa39.08■■■■□ 3.85
MTA1-213ENST00000490198 THOC2Q8NI27 1593 aaKnown RBP38.92■■■■□ 3.82
MTA1-213ENST00000490198 WIZO95785 1651 aa38.89■■■■□ 3.82
MTA1-213ENST00000490198 PDS5BQ9NTI5 1447 aa38.87■■■■□ 3.81
MTA1-213ENST00000490198 KIF21AQ7Z4S6 1674 aa38.84■■■■□ 3.81
MTA1-213ENST00000490198 CADPSQ9ULU8 1353 aa38.78■■■■□ 3.8
MTA1-213ENST00000490198 RSF1Q96T23 1441 aaPredicted RBP38.55■■■■□ 3.76
MTA1-213ENST00000490198 MRC2Q9UBG0 1479 aa38.52■■■■□ 3.76
MTA1-213ENST00000490198 WDR62O43379 1518 aa38.4■■■■□ 3.74
MTA1-213ENST00000490198 TOP2AP11388 1531 aaKnown RBP38.38■■■■□ 3.73
MTA1-213ENST00000490198 CEP164Q9UPV0 1460 aa38.37■■■■□ 3.73
MTA1-213ENST00000490198 FANCD2Q9BXW9 1451 aa38.34■■■■□ 3.73
MTA1-213ENST00000490198 CFTRP13569 1480 aa38.33■■■■□ 3.73
MTA1-213ENST00000490198 URB2Q14146 1524 aaKnown RBP38.02■■■■□ 3.68
MTA1-213ENST00000490198 CCDC88BA6NC98 1476 aa37.96■■■■□ 3.67
MTA1-213ENST00000490198 PRDM2Q13029 1718 aa37.95■■■■□ 3.67
MTA1-213ENST00000490198 TRIM41Q8WV44 630 aa37.75■■■■□ 3.63
MTA1-213ENST00000490198 OSCARQ8IYS5 282 aa37.71■■■■□ 3.63
MTA1-213ENST00000490198 TOPBP1Q92547 1522 aa37.61■■■■□ 3.61
MTA1-213ENST00000490198 IFT140Q96RY7 1462 aa37.6■■■■□ 3.61
MTA1-213ENST00000490198 ZNF608Q9ULD9 1512 aaPredicted RBP37.55■■■■□ 3.6
MTA1-213ENST00000490198 ABCC8Q09428 1581 aa37.55■■■■□ 3.6
MTA1-213ENST00000490198 DNMBPQ6XZF7 1577 aa37.46■■■■□ 3.59
MTA1-213ENST00000490198 EIF4G3O43432 1585 aaKnown RBP37.33■■■■□ 3.57
MTA1-213ENST00000490198 TARBP1Q13395 1621 aaKnown RBP37.27■■■■□ 3.56
MTA1-213ENST00000490198 AQRO60306 1485 aaKnown RBP eCLIP37.22■■■■□ 3.553e-8■■■■□ 24.1
MTA1-213ENST00000490198 POLA1P09884 1462 aaPredicted RBP37.22■■■■□ 3.55
MTA1-213ENST00000490198 RIMBP3CA6NJZ7 1639 aa37.18■■■■□ 3.54
MTA1-213ENST00000490198 RIMBP3BA6NNM3 1639 aa37.18■■■■□ 3.54
MTA1-213ENST00000490198 RIMBP3Q9UFD9 1639 aa37.18■■■■□ 3.54
MTA1-213ENST00000490198 RAD54L2Q9Y4B4 1467 aa37.1■■■■□ 3.53
MTA1-213ENST00000490198 SOGA1O94964 1423 aa37.08■■■■□ 3.53
MTA1-213ENST00000490198 CHD1O14646 1710 aa37.06■■■■□ 3.52
MTA1-213ENST00000490198 ARHGEF11O15085 1522 aa37.05■■■■□ 3.52
MTA1-213ENST00000490198 FBLN2P98095 1184 aa37.01■■■■□ 3.52
MTA1-213ENST00000490198 TDRD9Q8NDG6 1382 aaKnown RBP37■■■■□ 3.51
MTA1-213ENST00000490198 FGD5Q6ZNL6 1462 aa37■■■■□ 3.51
MTA1-213ENST00000490198 CUX1P39880 1505 aa36.97■■■■□ 3.51
MTA1-213ENST00000490198 SUPT5HO00267 1087 aaKnown RBP36.92■■■■□ 3.5
MTA1-213ENST00000490198 WDR97A6NE52 1622 aa36.88■■■■□ 3.49
MTA1-213ENST00000490198 CYB5RLQ6IPT4 315 aa36.83■■■■□ 3.49
MTA1-213ENST00000490198 SNAPC4Q5SXM2 1469 aa36.82■■■■□ 3.49
MTA1-213ENST00000490198 CHMP7Q8WUX9 453 aaPredicted RBP36.74■■■■□ 3.47
MTA1-213ENST00000490198 GRIN2BQ13224 1484 aa36.74■■■■□ 3.47
MTA1-213ENST00000490198 MAGI1Q96QZ7 1491 aaPredicted RBP36.73■■■■□ 3.47
MTA1-213ENST00000490198 ARAP1Q96P48 1450 aa36.69■■■■□ 3.46
MTA1-213ENST00000490198 GAPVD1Q14C86 1478 aa36.62■■■■□ 3.45
MTA1-213ENST00000490198 CLASP1Q7Z460 1538 aa36.62■■■■□ 3.45
MTA1-213ENST00000490198 SYNJ1O43426 1573 aa36.61■■■■□ 3.45
MTA1-213ENST00000490198 SYNJ2O15056 1496 aa36.61■■■■□ 3.45
MTA1-213ENST00000490198 PBRM1Q86U86 1689 aa36.59■■■■□ 3.45
MTA1-213ENST00000490198 ABCA10Q8WWZ4 1543 aa36.58■■■■□ 3.45
MTA1-213ENST00000490198 ABCA5Q8WWZ7 1642 aa36.51■■■■□ 3.43
MTA1-213ENST00000490198 WRNQ14191 1432 aaPredicted RBP eCLIP36.45■■■■□ 3.43
MTA1-213ENST00000490198 TRHP20396 242 aaPredicted RBP36.42■■■■□ 3.42
MTA1-213ENST00000490198 TOP2BQ02880 1626 aa36.38■■■■□ 3.41
MTA1-213ENST00000490198 BIVM-ERCC5R4GMW8 1640 aa36.37■■■■□ 3.41
MTA1-213ENST00000490198 GRIN2AQ12879 1464 aa36.26■■■■□ 3.4
MTA1-213ENST00000490198 ADAMTS12P58397 1594 aa36.23■■■■□ 3.39
MTA1-213ENST00000490198 FHAD1B1AJZ9 1412 aa36.16■■■■□ 3.38
MTA1-213ENST00000490198 NUP160Q12769 1436 aa36.13■■■■□ 3.37
MTA1-213ENST00000490198 ERICH3Q5RHP9 1530 aa36.13■■■■□ 3.37
MTA1-213ENST00000490198 CEP170Q5SW79 1584 aa36.12■■■■□ 3.37
MTA1-213ENST00000490198 ERCC6L2Q5T890 1561 aa36.06■■■■□ 3.36
MTA1-213ENST00000490198 SHROOM2Q13796 1616 aa35.97■■■■□ 3.35
MTA1-213ENST00000490198 JPH4Q96JJ6 628 aa35.81■■■■□ 3.32
MTA1-213ENST00000490198 PRG4Q92954 1404 aaPredicted RBP35.81■■■■□ 3.32
MTA1-213ENST00000490198 RUSC2Q8N2Y8 1516 aa35.72■■■■□ 3.31
MTA1-213ENST00000490198 KIF27Q86VH2 1401 aa35.69■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms