RNA–Protein interactions for RNA: ENST00000489661.5

PRDM15-213, Transcript of PR/SET domain 15, humanhuman

TSL 3

Gene PRDM15, Length 856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-213ENST00000489661 NISCHQ9Y2I1 1504 aa35.18■■■■□ 3.22
PRDM15-213ENST00000489661 CCDC180Q9P1Z9 1646 aa31.38■■■□□ 2.61
PRDM15-213ENST00000489661 ABCC9O60706 1549 aa30.99■■■□□ 2.55
PRDM15-213ENST00000489661 RB1CC1Q8TDY2 1594 aa29.72■■■□□ 2.35
PRDM15-213ENST00000489661 DCAF8L2P0C7V8 631 aa29.69■■■□□ 2.34
PRDM15-213ENST00000489661 NACADO15069 1562 aa29.6■■■□□ 2.33
PRDM15-213ENST00000489661 MYO15BQ96JP2 1530 aa29.3■■■□□ 2.28
PRDM15-213ENST00000489661 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
PRDM15-213ENST00000489661 DCAF1Q9Y4B6 1507 aa29.09■■■□□ 2.25
PRDM15-213ENST00000489661 PABPN1Q86U42 306 aaKnown RBP eCLIP28.95■■■□□ 2.22
PRDM15-213ENST00000489661 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
PRDM15-213ENST00000489661 BICRAQ9NZM4 1560 aa28.7■■■□□ 2.18
PRDM15-213ENST00000489661 SCRIBQ14160 1630 aa28.66■■■□□ 2.18
PRDM15-213ENST00000489661 DNAJC5BQ9UF47 199 aa28.58■■■□□ 2.17
PRDM15-213ENST00000489661 SHROOM4Q9ULL8 1493 aa28.48■■■□□ 2.15
PRDM15-213ENST00000489661 EIF4G1Q04637 1599 aaKnown RBP28.04■■■□□ 2.08
PRDM15-213ENST00000489661 CC2D2AQ9P2K1 1620 aa27.99■■■□□ 2.07
PRDM15-213ENST00000489661 CECR2Q9BXF3 1484 aa27.89■■■□□ 2.06
PRDM15-213ENST00000489661 SMARCA4P51532 1647 aa27.35■■□□□ 1.97
PRDM15-213ENST00000489661 BAZ1AQ9NRL2 1556 aaPredicted RBP27.33■■□□□ 1.97
PRDM15-213ENST00000489661 NCAPD3P42695 1498 aa27.29■■□□□ 1.96
PRDM15-213ENST00000489661 SMARCA2P51531 1590 aa27.28■■□□□ 1.96
PRDM15-213ENST00000489661 ATAD2BQ9ULI0 1458 aa27.27■■□□□ 1.96
PRDM15-213ENST00000489661 HMGXB3Q12766 1538 aa27.14■■□□□ 1.94
PRDM15-213ENST00000489661 BAZ1BQ9UIG0 1483 aaKnown RBP27.1■■□□□ 1.93
PRDM15-213ENST00000489661 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
PRDM15-213ENST00000489661 PEG3Q9GZU2 1588 aa27.05■■□□□ 1.92
PRDM15-213ENST00000489661 ERCC6Q03468 1493 aa26.83■■□□□ 1.89
PRDM15-213ENST00000489661 WIZO95785 1651 aa26.79■■□□□ 1.88
PRDM15-213ENST00000489661 RSF1Q96T23 1441 aaPredicted RBP26.71■■□□□ 1.87
PRDM15-213ENST00000489661 NESP48681 1621 aa26.7■■□□□ 1.86
PRDM15-213ENST00000489661 LAMC3Q9Y6N6 1575 aa26.64■■□□□ 1.86
PRDM15-213ENST00000489661 CUX2O14529 1486 aa26.55■■□□□ 1.84
PRDM15-213ENST00000489661 PDS5BQ9NTI5 1447 aa26.54■■□□□ 1.84
PRDM15-213ENST00000489661 TOP2AP11388 1531 aaKnown RBP26.52■■□□□ 1.84
PRDM15-213ENST00000489661 CADPSQ9ULU8 1353 aa26.52■■□□□ 1.84
PRDM15-213ENST00000489661 KIF21AQ7Z4S6 1674 aa26.38■■□□□ 1.81
PRDM15-213ENST00000489661 THOC2Q8NI27 1593 aaKnown RBP26.33■■□□□ 1.8
PRDM15-213ENST00000489661 CFTRP13569 1480 aa26.28■■□□□ 1.8
PRDM15-213ENST00000489661 MRC2Q9UBG0 1479 aa26.23■■□□□ 1.79
PRDM15-213ENST00000489661 CEP164Q9UPV0 1460 aa26.23■■□□□ 1.79
PRDM15-213ENST00000489661 FANCD2Q9BXW9 1451 aa26.23■■□□□ 1.79
PRDM15-213ENST00000489661 CCDC88BA6NC98 1476 aa26.21■■□□□ 1.79
PRDM15-213ENST00000489661 WDR62O43379 1518 aa26.1■■□□□ 1.77
PRDM15-213ENST00000489661 PRDM2Q13029 1718 aa26.04■■□□□ 1.76
PRDM15-213ENST00000489661 DNAJC5Q9H3Z4 198 aa26.03■■□□□ 1.76
PRDM15-213ENST00000489661 SUPT5HO00267 1087 aaKnown RBP25.99■■□□□ 1.75
PRDM15-213ENST00000489661 URB2Q14146 1524 aaKnown RBP25.92■■□□□ 1.74
PRDM15-213ENST00000489661 ABCC8Q09428 1581 aa25.8■■□□□ 1.72
PRDM15-213ENST00000489661 TOPBP1Q92547 1522 aa25.75■■□□□ 1.71
PRDM15-213ENST00000489661 DNMBPQ6XZF7 1577 aa25.71■■□□□ 1.71
PRDM15-213ENST00000489661 IFT140Q96RY7 1462 aa25.69■■□□□ 1.7
PRDM15-213ENST00000489661 ZNF608Q9ULD9 1512 aaPredicted RBP25.53■■□□□ 1.68
PRDM15-213ENST00000489661 POLA1P09884 1462 aaPredicted RBP25.51■■□□□ 1.67
PRDM15-213ENST00000489661 OSCARQ8IYS5 282 aa25.48■■□□□ 1.67
PRDM15-213ENST00000489661 SOGA1O94964 1423 aa25.46■■□□□ 1.67
PRDM15-213ENST00000489661 CUX1P39880 1505 aa25.44■■□□□ 1.66
PRDM15-213ENST00000489661 TARBP1Q13395 1621 aaKnown RBP25.44■■□□□ 1.66
PRDM15-213ENST00000489661 EIF4G3O43432 1585 aaKnown RBP25.44■■□□□ 1.66
PRDM15-213ENST00000489661 FGD5Q6ZNL6 1462 aa25.43■■□□□ 1.66
PRDM15-213ENST00000489661 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
PRDM15-213ENST00000489661 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.66
PRDM15-213ENST00000489661 TDRD9Q8NDG6 1382 aaKnown RBP25.32■■□□□ 1.64
PRDM15-213ENST00000489661 WDR97A6NE52 1622 aa25.3■■□□□ 1.64
PRDM15-213ENST00000489661 FBLN2P98095 1184 aa25.27■■□□□ 1.64
PRDM15-213ENST00000489661 WRNQ14191 1432 aaPredicted RBP eCLIP25.25■■□□□ 1.63
PRDM15-213ENST00000489661 GRIN2BQ13224 1484 aa25.19■■□□□ 1.62
PRDM15-213ENST00000489661 TOP2BQ02880 1626 aa25.17■■□□□ 1.62
PRDM15-213ENST00000489661 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
PRDM15-213ENST00000489661 SNAPC4Q5SXM2 1469 aa25.16■■□□□ 1.62
PRDM15-213ENST00000489661 ABCA10Q8WWZ4 1543 aa25.16■■□□□ 1.62
PRDM15-213ENST00000489661 CHD1O14646 1710 aa25.15■■□□□ 1.62
PRDM15-213ENST00000489661 CHMP7Q8WUX9 453 aaPredicted RBP25.15■■□□□ 1.62
PRDM15-213ENST00000489661 BIVM-ERCC5R4GMW8 1640 aa25.15■■□□□ 1.62
PRDM15-213ENST00000489661 GAPVD1Q14C86 1478 aa25.15■■□□□ 1.62
PRDM15-213ENST00000489661 MAGI1Q96QZ7 1491 aaPredicted RBP25.14■■□□□ 1.61
PRDM15-213ENST00000489661 SYNJ1O43426 1573 aa25.13■■□□□ 1.61
PRDM15-213ENST00000489661 PBRM1Q86U86 1689 aa25.07■■□□□ 1.6
PRDM15-213ENST00000489661 ABCA5Q8WWZ7 1642 aa25.04■■□□□ 1.6
PRDM15-213ENST00000489661 SYNJ2O15056 1496 aa25.04■■□□□ 1.6
PRDM15-213ENST00000489661 RIMBP3CA6NJZ7 1639 aa24.99■■□□□ 1.59
PRDM15-213ENST00000489661 RIMBP3BA6NNM3 1639 aa24.99■■□□□ 1.59
PRDM15-213ENST00000489661 RIMBP3Q9UFD9 1639 aa24.99■■□□□ 1.59
PRDM15-213ENST00000489661 ARHGEF11O15085 1522 aa24.97■■□□□ 1.59
PRDM15-213ENST00000489661 ERICH3Q5RHP9 1530 aa24.87■■□□□ 1.57
PRDM15-213ENST00000489661 CLASP1Q7Z460 1538 aa24.86■■□□□ 1.57
PRDM15-213ENST00000489661 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
PRDM15-213ENST00000489661 ADAMTS12P58397 1594 aa24.85■■□□□ 1.57
PRDM15-213ENST00000489661 CYB5RLQ6IPT4 315 aa24.84■■□□□ 1.57
PRDM15-213ENST00000489661 GRIN2AQ12879 1464 aa24.83■■□□□ 1.57
PRDM15-213ENST00000489661 KIF27Q86VH2 1401 aa24.78■■□□□ 1.56
PRDM15-213ENST00000489661 ARAP1Q96P48 1450 aa24.74■■□□□ 1.55
PRDM15-213ENST00000489661 NUP160Q12769 1436 aa24.7■■□□□ 1.55
PRDM15-213ENST00000489661 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
PRDM15-213ENST00000489661 IGF1RP08069 1367 aa24.64■■□□□ 1.53
PRDM15-213ENST00000489661 CUL7Q14999 1698 aa24.62■■□□□ 1.53
PRDM15-213ENST00000489661 CARMIL1Q5VZK9 1371 aa24.54■■□□□ 1.52
PRDM15-213ENST00000489661 JPH4Q96JJ6 628 aa24.53■■□□□ 1.52
PRDM15-213ENST00000489661 SHROOM2Q13796 1616 aa24.51■■□□□ 1.51
PRDM15-213ENST00000489661 TRHP20396 242 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms