RNA–Protein interactions for RNA: ENST00000488655.5

LRMDA-204, Transcript of leucine rich melanocyte differentiation associated, human

TSL 2

Gene LRMDA, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRMDA-204	ENST00000488655	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	8.99	□□□□□ -0.97	1e-22	■■■■■ 153.9
LRMDA-204	ENST00000488655	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	7.33	□□□□□ -1.24	3e-9	■■■■■ 78.5
LRMDA-204	ENST00000488655	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	7.24	□□□□□ -1.25	1e-6	■■■■■ 56.2
LRMDA-204	ENST00000488655	PTBP1	P26599	531 aa	Known RBP eCLIP	5.89	□□□□□ -1.47	1e-6	■■■■■ 31.5
LRMDA-204	ENST00000488655	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.37	□□□□□ -0.75	1e-8	■■■■■ 29.5
LRMDA-204	ENST00000488655	QKI	Q96PU8	341 aa	Known RBP eCLIP	7.54	□□□□□ -1.2	9e-7	■■■■□ 25
LRMDA-204	ENST00000488655	HNRNPL	P14866	589 aa	Known RBP eCLIP	7.74	□□□□□ -1.17	8e-8	■■■■□ 23.8
LRMDA-204	ENST00000488655	MATR3	P43243	847 aa	Known RBP eCLIP	8.12	□□□□□ -1.11	3e-6	■■■■□ 23.5
LRMDA-204	ENST00000488655	RBFOX2	O43251	390 aa	Known RBP eCLIP	5.88	□□□□□ -1.47	7e-7	■■■□□ 17.9
LRMDA-204	ENST00000488655	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.68	□□□□□ -0.54	5e-6	■■■□□ 17.7
LRMDA-204	ENST00000488655	AGGF1	Q8N302	714 aa	eCLIP	7.39	□□□□□ -1.23	4e-8	■□□□□ 11.1

Retrieved 11 of 11 RNA–protein pairs in 5.7 ms