RNA–Protein interactions for RNA: ENST00000487845.5

EFCAB2-211, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 2

Gene EFCAB2, Length 1,389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-211ENST00000487845 AEBP2Q6ZN18 517 aaPredicted RBP29.03■■■□□ 2.24
EFCAB2-211ENST00000487845 CHIC1Q5VXU3 224 aa27.21■■□□□ 1.95
EFCAB2-211ENST00000487845 SENP3Q9H4L4 574 aaPredicted RBP24.86■■□□□ 1.57
EFCAB2-211ENST00000487845 PHF23Q9BUL5 403 aaPredicted RBP24.48■■□□□ 1.51
EFCAB2-211ENST00000487845 FOXD1Q16676 465 aa23.2■■□□□ 1.3
EFCAB2-211ENST00000487845 NISCHQ9Y2I1 1504 aa22.46■■□□□ 1.19
EFCAB2-211ENST00000487845 POTEDQ86YR6 584 aa21.99■■□□□ 1.11
EFCAB2-211ENST00000487845 MSH5O43196 834 aa21.87■■□□□ 1.09
EFCAB2-211ENST00000487845 PIAS4Q8N2W9 510 aaPredicted RBP21.62■■□□□ 1.05
EFCAB2-211ENST00000487845 PLPPR3Q6T4P5 718 aa21.59■■□□□ 1.05
EFCAB2-211ENST00000487845 PPP6R1Q9UPN7 881 aa21.39■■□□□ 1.02
EFCAB2-211ENST00000487845 ADRA2BP18089 450 aa21.34■■□□□ 1.01
EFCAB2-211ENST00000487845 CCDC180Q9P1Z9 1646 aa19.99■□□□□ 0.79
EFCAB2-211ENST00000487845 MAPK8IP2Q13387 824 aaPredicted RBP19.71■□□□□ 0.75
EFCAB2-211ENST00000487845 ABCC9O60706 1549 aa19.68■□□□□ 0.74
EFCAB2-211ENST00000487845 DMRT2Q9Y5R5 561 aa19.63■□□□□ 0.73
EFCAB2-211ENST00000487845 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
EFCAB2-211ENST00000487845 CACNB1Q02641 598 aaPredicted RBP19.06■□□□□ 0.64
EFCAB2-211ENST00000487845 DCAF8L1A6NGE4 600 aa18.96■□□□□ 0.63
EFCAB2-211ENST00000487845 RB1CC1Q8TDY2 1594 aa18.88■□□□□ 0.61
EFCAB2-211ENST00000487845 PPP4R3CPQ6ZMV5 832 aa18.87■□□□□ 0.61
EFCAB2-211ENST00000487845 DCAF8L2P0C7V8 631 aa18.86■□□□□ 0.61
EFCAB2-211ENST00000487845 NACADO15069 1562 aa18.82■□□□□ 0.6
EFCAB2-211ENST00000487845 HOXD11P31277 338 aaPredicted RBP18.74■□□□□ 0.59
EFCAB2-211ENST00000487845 ZCCHC6Q5VYS8 1495 aaKnown RBP18.7■□□□□ 0.58
EFCAB2-211ENST00000487845 MYO15BQ96JP2 1530 aa18.65■□□□□ 0.58
EFCAB2-211ENST00000487845 RNF39Q9H2S5 420 aa18.61■□□□□ 0.57
EFCAB2-211ENST00000487845 CNKSR2Q8WXI2 1034 aa18.6■□□□□ 0.57
EFCAB2-211ENST00000487845 DCAF1Q9Y4B6 1507 aa18.55■□□□□ 0.56
EFCAB2-211ENST00000487845 RNF216Q9NWF9 866 aaPredicted RBP18.52■□□□□ 0.55
EFCAB2-211ENST00000487845 UNC13AQ9UPW8 1703 aa18.38■□□□□ 0.53
EFCAB2-211ENST00000487845 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.53
EFCAB2-211ENST00000487845 C1QBPQ07021 282 aaKnown RBP18.33■□□□□ 0.53
EFCAB2-211ENST00000487845 SCRIBQ14160 1630 aa18.28■□□□□ 0.52
EFCAB2-211ENST00000487845 BICRAQ9NZM4 1560 aa18.27■□□□□ 0.52
EFCAB2-211ENST00000487845 DNAJC5BQ9UF47 199 aa18.14■□□□□ 0.49
EFCAB2-211ENST00000487845 SHROOM4Q9ULL8 1493 aa18.09■□□□□ 0.49
EFCAB2-211ENST00000487845 NCBP3Q53F19 620 aaKnown RBP18.06■□□□□ 0.48
EFCAB2-211ENST00000487845 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.46
EFCAB2-211ENST00000487845 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.44
EFCAB2-211ENST00000487845 CC2D2AQ9P2K1 1620 aa17.77■□□□□ 0.43
EFCAB2-211ENST00000487845 NPM3O75607 178 aaKnown RBP17.76■□□□□ 0.43
EFCAB2-211ENST00000487845 CECR2Q9BXF3 1484 aa17.68■□□□□ 0.42
EFCAB2-211ENST00000487845 U3KPZ7 1027 aaPredicted RBP17.47■□□□□ 0.39
EFCAB2-211ENST00000487845 SMARCA4P51532 1647 aa17.45■□□□□ 0.38
EFCAB2-211ENST00000487845 BAZ1AQ9NRL2 1556 aaPredicted RBP17.43■□□□□ 0.38
EFCAB2-211ENST00000487845 CAPN15O75808 1086 aa17.39■□□□□ 0.37
EFCAB2-211ENST00000487845 ATAD2BQ9ULI0 1458 aa17.37■□□□□ 0.37
EFCAB2-211ENST00000487845 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
EFCAB2-211ENST00000487845 NCAPD3P42695 1498 aa17.35■□□□□ 0.37
EFCAB2-211ENST00000487845 SPINK5Q9NQ38 1064 aaPredicted RBP17.35■□□□□ 0.37
EFCAB2-211ENST00000487845 DSG3P32926 999 aa17.31■□□□□ 0.36
EFCAB2-211ENST00000487845 MROH2BQ7Z745 1585 aa17.31■□□□□ 0.36
EFCAB2-211ENST00000487845 HMGXB3Q12766 1538 aa17.27■□□□□ 0.36
EFCAB2-211ENST00000487845 BAZ1BQ9UIG0 1483 aaKnown RBP17.26■□□□□ 0.35
EFCAB2-211ENST00000487845 PEG3Q9GZU2 1588 aa17.25■□□□□ 0.35
EFCAB2-211ENST00000487845 POTEHQ6S545 545 aa17.18■□□□□ 0.34
EFCAB2-211ENST00000487845 WIZO95785 1651 aa17.12■□□□□ 0.33
EFCAB2-211ENST00000487845 KCNA4P22459 653 aa17.09■□□□□ 0.33
EFCAB2-211ENST00000487845 RSF1Q96T23 1441 aaPredicted RBP17.08■□□□□ 0.33
EFCAB2-211ENST00000487845 SLC4A2P04920 1241 aa17.04■□□□□ 0.32
EFCAB2-211ENST00000487845 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.31
EFCAB2-211ENST00000487845 ERCC6Q03468 1493 aa16.99■□□□□ 0.31
EFCAB2-211ENST00000487845 NESP48681 1621 aa16.99■□□□□ 0.31
EFCAB2-211ENST00000487845 APLP2Q06481 763 aa16.98■□□□□ 0.31
EFCAB2-211ENST00000487845 TOP2AP11388 1531 aaKnown RBP16.96■□□□□ 0.3
EFCAB2-211ENST00000487845 ABCB7O75027 752 aa16.94■□□□□ 0.3
EFCAB2-211ENST00000487845 ZNF219Q9P2Y4 722 aaPredicted RBP16.93■□□□□ 0.3
EFCAB2-211ENST00000487845 LAMC3Q9Y6N6 1575 aa16.92■□□□□ 0.3
EFCAB2-211ENST00000487845 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.87■□□□□ 0.29
EFCAB2-211ENST00000487845 HNRNPUL2Q1KMD3 747 aaKnown RBP16.87■□□□□ 0.29
EFCAB2-211ENST00000487845 CADPSQ9ULU8 1353 aa16.86■□□□□ 0.29
EFCAB2-211ENST00000487845 PDS5BQ9NTI5 1447 aa16.83■□□□□ 0.29
EFCAB2-211ENST00000487845 CUX2O14529 1486 aa16.79■□□□□ 0.28
EFCAB2-211ENST00000487845 KIF21AQ7Z4S6 1674 aa16.77■□□□□ 0.28
EFCAB2-211ENST00000487845 SAMD1Q6SPF0 538 aaPredicted RBP16.75■□□□□ 0.27
EFCAB2-211ENST00000487845 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
EFCAB2-211ENST00000487845 CFTRP13569 1480 aa16.74■□□□□ 0.27
EFCAB2-211ENST00000487845 THOC2Q8NI27 1593 aaKnown RBP16.73■□□□□ 0.27
EFCAB2-211ENST00000487845 FANCD2Q9BXW9 1451 aa16.69■□□□□ 0.26
EFCAB2-211ENST00000487845 CEP164Q9UPV0 1460 aa16.69■□□□□ 0.26
EFCAB2-211ENST00000487845 MRC2Q9UBG0 1479 aa16.67■□□□□ 0.26
EFCAB2-211ENST00000487845 SUPT5HO00267 1087 aaKnown RBP16.65■□□□□ 0.26
EFCAB2-211ENST00000487845 WDR62O43379 1518 aa16.6■□□□□ 0.25
EFCAB2-211ENST00000487845 PRDM2Q13029 1718 aa16.59■□□□□ 0.25
EFCAB2-211ENST00000487845 RBM42Q9BTD8 480 aaKnown RBP16.55■□□□□ 0.24
EFCAB2-211ENST00000487845 URB2Q14146 1524 aaKnown RBP16.51■□□□□ 0.23
EFCAB2-211ENST00000487845 MYCNP04198 464 aaPredicted RBP16.45■□□□□ 0.22
EFCAB2-211ENST00000487845 POLA2Q14181 598 aa16.44■□□□□ 0.22
EFCAB2-211ENST00000487845 TOPBP1Q92547 1522 aa16.4■□□□□ 0.22
EFCAB2-211ENST00000487845 ABCC8Q09428 1581 aa16.39■□□□□ 0.21
EFCAB2-211ENST00000487845 DNMBPQ6XZF7 1577 aa16.38■□□□□ 0.21
EFCAB2-211ENST00000487845 DNAJC5Q9H3Z4 198 aa16.35■□□□□ 0.21
EFCAB2-211ENST00000487845 CHRDL2Q6WN34 429 aa16.34■□□□□ 0.21
EFCAB2-211ENST00000487845 IFT140Q96RY7 1462 aa16.33■□□□□ 0.2
EFCAB2-211ENST00000487845 ZNF608Q9ULD9 1512 aaPredicted RBP16.26■□□□□ 0.19
EFCAB2-211ENST00000487845 POLA1P09884 1462 aaPredicted RBP16.26■□□□□ 0.19
EFCAB2-211ENST00000487845 CUX1P39880 1505 aa16.25■□□□□ 0.19
EFCAB2-211ENST00000487845 FGD5Q6ZNL6 1462 aa16.22■□□□□ 0.19
EFCAB2-211ENST00000487845 TARBP1Q13395 1621 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms