RNA–Protein interactions for RNA: ENST00000487775.1

PGD-206, Transcript of phosphogluconate dehydrogenase, humanhuman

TSL 2

Gene PGD, Length 462 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGD-206ENST00000487775 NISCHQ9Y2I1 1504 aa33.08■■■□□ 2.89
PGD-206ENST00000487775 CCDC180Q9P1Z9 1646 aa29.48■■■□□ 2.31
PGD-206ENST00000487775 ABCC9O60706 1549 aa28.63■■■□□ 2.17
PGD-206ENST00000487775 RB1CC1Q8TDY2 1594 aa27.66■■■□□ 2.02
PGD-206ENST00000487775 NACADO15069 1562 aa27.65■■■□□ 2.02
PGD-206ENST00000487775 ZCCHC6Q5VYS8 1495 aaKnown RBP27.59■■■□□ 2.01
PGD-206ENST00000487775 MYO15BQ96JP2 1530 aa27.55■■■□□ 2
PGD-206ENST00000487775 DCAF8L2P0C7V8 631 aa27.48■■□□□ 1.99
PGD-206ENST00000487775 DCAF1Q9Y4B6 1507 aa27.44■■□□□ 1.98
PGD-206ENST00000487775 UNC13AQ9UPW8 1703 aa27.07■■□□□ 1.92
PGD-206ENST00000487775 SCRIBQ14160 1630 aa26.8■■□□□ 1.88
PGD-206ENST00000487775 BICRAQ9NZM4 1560 aa26.8■■□□□ 1.88
PGD-206ENST00000487775 PABPN1Q86U42 306 aaKnown RBP eCLIP26.69■■□□□ 1.86
PGD-206ENST00000487775 SHROOM4Q9ULL8 1493 aa26.6■■□□□ 1.85
PGD-206ENST00000487775 DNAJC5BQ9UF47 199 aa26.14■■□□□ 1.78
PGD-206ENST00000487775 EIF4G1Q04637 1599 aaKnown RBP26.08■■□□□ 1.77
PGD-206ENST00000487775 CC2D2AQ9P2K1 1620 aa25.96■■□□□ 1.75
PGD-206ENST00000487775 CECR2Q9BXF3 1484 aa25.73■■□□□ 1.71
PGD-206ENST00000487775 SMARCA4P51532 1647 aa25.68■■□□□ 1.7
PGD-206ENST00000487775 BAZ1AQ9NRL2 1556 aaPredicted RBP25.67■■□□□ 1.7
PGD-206ENST00000487775 SMARCA2P51531 1590 aa25.51■■□□□ 1.67
PGD-206ENST00000487775 ATAD2BQ9ULI0 1458 aa25.48■■□□□ 1.67
PGD-206ENST00000487775 NCAPD3P42695 1498 aa25.47■■□□□ 1.67
PGD-206ENST00000487775 MROH2BQ7Z745 1585 aa25.47■■□□□ 1.67
PGD-206ENST00000487775 PEG3Q9GZU2 1588 aa25.46■■□□□ 1.67
PGD-206ENST00000487775 HMGXB3Q12766 1538 aa25.41■■□□□ 1.66
PGD-206ENST00000487775 BAZ1BQ9UIG0 1483 aaKnown RBP25.29■■□□□ 1.64
PGD-206ENST00000487775 WIZO95785 1651 aa25.23■■□□□ 1.63
PGD-206ENST00000487775 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.62
PGD-206ENST00000487775 TOP2AP11388 1531 aaKnown RBP24.98■■□□□ 1.59
PGD-206ENST00000487775 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
PGD-206ENST00000487775 NESP48681 1621 aa24.79■■□□□ 1.56
PGD-206ENST00000487775 CADPSQ9ULU8 1353 aa24.71■■□□□ 1.55
PGD-206ENST00000487775 ERCC6Q03468 1493 aa24.7■■□□□ 1.54
PGD-206ENST00000487775 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.54
PGD-206ENST00000487775 PDS5BQ9NTI5 1447 aa24.62■■□□□ 1.53
PGD-206ENST00000487775 CFTRP13569 1480 aa24.6■■□□□ 1.53
PGD-206ENST00000487775 KIF21AQ7Z4S6 1674 aa24.59■■□□□ 1.53
PGD-206ENST00000487775 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
PGD-206ENST00000487775 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
PGD-206ENST00000487775 THOC2Q8NI27 1593 aaKnown RBP24.48■■□□□ 1.51
PGD-206ENST00000487775 CUX2O14529 1486 aa24.45■■□□□ 1.51
PGD-206ENST00000487775 FANCD2Q9BXW9 1451 aa24.44■■□□□ 1.5
PGD-206ENST00000487775 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
PGD-206ENST00000487775 MRC2Q9UBG0 1479 aa24.37■■□□□ 1.49
PGD-206ENST00000487775 WDR62O43379 1518 aa24.3■■□□□ 1.48
PGD-206ENST00000487775 URB2Q14146 1524 aaKnown RBP24.19■■□□□ 1.46
PGD-206ENST00000487775 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
PGD-206ENST00000487775 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.44
PGD-206ENST00000487775 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
PGD-206ENST00000487775 IFT140Q96RY7 1462 aa23.91■■□□□ 1.42
PGD-206ENST00000487775 CUX1P39880 1505 aa23.9■■□□□ 1.42
PGD-206ENST00000487775 POLA1P09884 1462 aaPredicted RBP23.86■■□□□ 1.41
PGD-206ENST00000487775 TARBP1Q13395 1621 aaKnown RBP23.82■■□□□ 1.4
PGD-206ENST00000487775 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
PGD-206ENST00000487775 BIVM-ERCC5R4GMW8 1640 aa23.78■■□□□ 1.4
PGD-206ENST00000487775 WRNQ14191 1432 aaPredicted RBP eCLIP23.77■■□□□ 1.4
PGD-206ENST00000487775 TOP2BQ02880 1626 aa23.76■■□□□ 1.39
PGD-206ENST00000487775 SOGA1O94964 1423 aa23.75■■□□□ 1.39
PGD-206ENST00000487775 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
PGD-206ENST00000487775 SYNJ1O43426 1573 aa23.72■■□□□ 1.39
PGD-206ENST00000487775 EIF4G3O43432 1585 aaKnown RBP23.72■■□□□ 1.39
PGD-206ENST00000487775 WDR97A6NE52 1622 aa23.71■■□□□ 1.39
PGD-206ENST00000487775 RAD54L2Q9Y4B4 1467 aa23.71■■□□□ 1.39
PGD-206ENST00000487775 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
PGD-206ENST00000487775 AQRO60306 1485 aaKnown RBP eCLIP23.61■■□□□ 1.372e-10■■■■■ 68
PGD-206ENST00000487775 TDRD9Q8NDG6 1382 aaKnown RBP23.56■■□□□ 1.36
PGD-206ENST00000487775 DNAJC5Q9H3Z4 198 aa23.54■■□□□ 1.36
PGD-206ENST00000487775 ABCA5Q8WWZ7 1642 aa23.53■■□□□ 1.36
PGD-206ENST00000487775 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
PGD-206ENST00000487775 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
PGD-206ENST00000487775 GRIN2BQ13224 1484 aa23.49■■□□□ 1.35
PGD-206ENST00000487775 MAGI1Q96QZ7 1491 aaPredicted RBP23.44■■□□□ 1.34
PGD-206ENST00000487775 SNAPC4Q5SXM2 1469 aa23.43■■□□□ 1.34
PGD-206ENST00000487775 CHD1O14646 1710 aa23.42■■□□□ 1.34
PGD-206ENST00000487775 OSCARQ8IYS5 282 aa23.39■■□□□ 1.33
PGD-206ENST00000487775 ERICH3Q5RHP9 1530 aa23.35■■□□□ 1.33
PGD-206ENST00000487775 SYNJ2O15056 1496 aa23.33■■□□□ 1.33
PGD-206ENST00000487775 ADAMTS12P58397 1594 aa23.29■■□□□ 1.32
PGD-206ENST00000487775 KIF27Q86VH2 1401 aa23.28■■□□□ 1.32
PGD-206ENST00000487775 FBLN2P98095 1184 aa23.27■■□□□ 1.32
PGD-206ENST00000487775 CHMP7Q8WUX9 453 aaPredicted RBP23.26■■□□□ 1.31
PGD-206ENST00000487775 FHAD1B1AJZ9 1412 aa23.23■■□□□ 1.31
PGD-206ENST00000487775 TRIM41Q8WV44 630 aa23.21■■□□□ 1.31
PGD-206ENST00000487775 GRIN2AQ12879 1464 aa23.18■■□□□ 1.3
PGD-206ENST00000487775 CUL7Q14999 1698 aa23.18■■□□□ 1.3
PGD-206ENST00000487775 CLASP1Q7Z460 1538 aa23.15■■□□□ 1.3
PGD-206ENST00000487775 IGF1RP08069 1367 aa23.14■■□□□ 1.29
PGD-206ENST00000487775 NUP160Q12769 1436 aa23.08■■□□□ 1.29
PGD-206ENST00000487775 CEP170Q5SW79 1584 aa23.06■■□□□ 1.28
PGD-206ENST00000487775 RIMBP3CA6NJZ7 1639 aa23.06■■□□□ 1.28
PGD-206ENST00000487775 RIMBP3BA6NNM3 1639 aa23.06■■□□□ 1.28
PGD-206ENST00000487775 RIMBP3Q9UFD9 1639 aa23.06■■□□□ 1.28
PGD-206ENST00000487775 ARHGEF11O15085 1522 aa23.04■■□□□ 1.28
PGD-206ENST00000487775 RUSC2Q8N2Y8 1516 aa23.03■■□□□ 1.28
PGD-206ENST00000487775 CARMIL1Q5VZK9 1371 aa23.01■■□□□ 1.27
PGD-206ENST00000487775 CHIC1Q5VXU3 224 aa22.97■■□□□ 1.27
PGD-206ENST00000487775 SHROOM2Q13796 1616 aa22.94■■□□□ 1.26
PGD-206ENST00000487775 EEA1Q15075 1411 aa22.92■■□□□ 1.26
PGD-206ENST00000487775 RAPGEF2Q9Y4G8 1499 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms