RNA–Protein interactions for RNA: ENST00000487653.1

AP3M1-204, Transcript of adaptor related protein complex 3 subunit mu 1, humanhuman

TSL 3

Gene AP3M1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M1-204ENST00000487653 NISCHQ9Y2I1 1504 aa38.04■■■■□ 3.68
AP3M1-204ENST00000487653 CCDC180Q9P1Z9 1646 aa34■■■■□ 3.03
AP3M1-204ENST00000487653 ABCC9O60706 1549 aa33.87■■■■□ 3.01
AP3M1-204ENST00000487653 RB1CC1Q8TDY2 1594 aa32.31■■■□□ 2.76
AP3M1-204ENST00000487653 NACADO15069 1562 aa32.15■■■□□ 2.74
AP3M1-204ENST00000487653 DCAF8L2P0C7V8 631 aa32.1■■■□□ 2.73
AP3M1-204ENST00000487653 MYO15BQ96JP2 1530 aa31.78■■■□□ 2.68
AP3M1-204ENST00000487653 DNAJC5BQ9UF47 199 aa31.64■■■□□ 2.66
AP3M1-204ENST00000487653 PABPN1Q86U42 306 aaKnown RBP eCLIP31.6■■■□□ 2.65
AP3M1-204ENST00000487653 ZCCHC6Q5VYS8 1495 aaKnown RBP31.55■■■□□ 2.64
AP3M1-204ENST00000487653 UNC13AQ9UPW8 1703 aa31.5■■■□□ 2.63
AP3M1-204ENST00000487653 DCAF1Q9Y4B6 1507 aa31.44■■■□□ 2.62
AP3M1-204ENST00000487653 BICRAQ9NZM4 1560 aa31.34■■■□□ 2.61
AP3M1-204ENST00000487653 SCRIBQ14160 1630 aa31■■■□□ 2.55
AP3M1-204ENST00000487653 SHROOM4Q9ULL8 1493 aa30.97■■■□□ 2.55
AP3M1-204ENST00000487653 CC2D2AQ9P2K1 1620 aa30.58■■■□□ 2.49
AP3M1-204ENST00000487653 EIF4G1Q04637 1599 aaKnown RBP30.58■■■□□ 2.49
AP3M1-204ENST00000487653 CECR2Q9BXF3 1484 aa30.5■■■□□ 2.47
AP3M1-204ENST00000487653 NCAPD3P42695 1498 aa29.71■■■□□ 2.35
AP3M1-204ENST00000487653 ATAD2BQ9ULI0 1458 aa29.62■■■□□ 2.33
AP3M1-204ENST00000487653 SMARCA4P51532 1647 aa29.6■■■□□ 2.33
AP3M1-204ENST00000487653 SMARCA2P51531 1590 aa29.54■■■□□ 2.32
AP3M1-204ENST00000487653 BAZ1AQ9NRL2 1556 aaPredicted RBP29.52■■■□□ 2.32
AP3M1-204ENST00000487653 HMGXB3Q12766 1538 aa29.45■■■□□ 2.31
AP3M1-204ENST00000487653 BAZ1BQ9UIG0 1483 aaKnown RBP29.34■■■□□ 2.29
AP3M1-204ENST00000487653 PEG3Q9GZU2 1588 aa29.33■■■□□ 2.29
AP3M1-204ENST00000487653 MROH2BQ7Z745 1585 aa29.3■■■□□ 2.28
AP3M1-204ENST00000487653 ERCC6Q03468 1493 aa29.24■■■□□ 2.27
AP3M1-204ENST00000487653 NESP48681 1621 aa29.13■■■□□ 2.25
AP3M1-204ENST00000487653 CUX2O14529 1486 aa29.12■■■□□ 2.25
AP3M1-204ENST00000487653 LAMC3Q9Y6N6 1575 aa28.96■■■□□ 2.23
AP3M1-204ENST00000487653 DNAJC5Q9H3Z4 198 aa28.94■■■□□ 2.22
AP3M1-204ENST00000487653 WIZO95785 1651 aa28.93■■■□□ 2.22
AP3M1-204ENST00000487653 PDS5BQ9NTI5 1447 aa28.84■■■□□ 2.21
AP3M1-204ENST00000487653 CADPSQ9ULU8 1353 aa28.82■■■□□ 2.2
AP3M1-204ENST00000487653 RSF1Q96T23 1441 aaPredicted RBP28.79■■■□□ 2.2
AP3M1-204ENST00000487653 THOC2Q8NI27 1593 aaKnown RBP28.77■■■□□ 2.2
AP3M1-204ENST00000487653 KIF21AQ7Z4S6 1674 aa28.72■■■□□ 2.19
AP3M1-204ENST00000487653 TOP2AP11388 1531 aaKnown RBP28.6■■■□□ 2.17
AP3M1-204ENST00000487653 MRC2Q9UBG0 1479 aa28.54■■■□□ 2.16
AP3M1-204ENST00000487653 CFTRP13569 1480 aa28.52■■■□□ 2.16
AP3M1-204ENST00000487653 CEP164Q9UPV0 1460 aa28.47■■■□□ 2.15
AP3M1-204ENST00000487653 FANCD2Q9BXW9 1451 aa28.46■■■□□ 2.15
AP3M1-204ENST00000487653 WDR62O43379 1518 aa28.45■■■□□ 2.15
AP3M1-204ENST00000487653 CCDC88BA6NC98 1476 aa28.3■■■□□ 2.12
AP3M1-204ENST00000487653 URB2Q14146 1524 aaKnown RBP28.2■■■□□ 2.1
AP3M1-204ENST00000487653 PRDM2Q13029 1718 aa28.14■■■□□ 2.1
AP3M1-204ENST00000487653 TOPBP1Q92547 1522 aa27.94■■■□□ 2.06
AP3M1-204ENST00000487653 ABCC8Q09428 1581 aa27.93■■■□□ 2.06
AP3M1-204ENST00000487653 IFT140Q96RY7 1462 aa27.91■■■□□ 2.06
AP3M1-204ENST00000487653 OSCARQ8IYS5 282 aa27.89■■■□□ 2.06
AP3M1-204ENST00000487653 DNMBPQ6XZF7 1577 aa27.83■■■□□ 2.05
AP3M1-204ENST00000487653 ZNF608Q9ULD9 1512 aaPredicted RBP27.82■■■□□ 2.04
AP3M1-204ENST00000487653 TRIM41Q8WV44 630 aa27.73■■■□□ 2.03
AP3M1-204ENST00000487653 SUPT5HO00267 1087 aaKnown RBP27.69■■■□□ 2.02
AP3M1-204ENST00000487653 POLA1P09884 1462 aaPredicted RBP27.67■■■□□ 2.02
AP3M1-204ENST00000487653 EIF4G3O43432 1585 aaKnown RBP27.65■■■□□ 2.02
AP3M1-204ENST00000487653 TARBP1Q13395 1621 aaKnown RBP27.64■■■□□ 2.02
AP3M1-204ENST00000487653 AQRO60306 1485 aaKnown RBP eCLIP27.62■■■□□ 2.016e-7■■□□□ 11.9
AP3M1-204ENST00000487653 SOGA1O94964 1423 aa27.58■■■□□ 2
AP3M1-204ENST00000487653 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
AP3M1-204ENST00000487653 CUX1P39880 1505 aa27.51■■■□□ 2
AP3M1-204ENST00000487653 FGD5Q6ZNL6 1462 aa27.51■■■□□ 2
AP3M1-204ENST00000487653 TDRD9Q8NDG6 1382 aaKnown RBP27.49■■□□□ 1.99
AP3M1-204ENST00000487653 FBLN2P98095 1184 aa27.43■■□□□ 1.98
AP3M1-204ENST00000487653 RIMBP3CA6NJZ7 1639 aa27.4■■□□□ 1.98
AP3M1-204ENST00000487653 RIMBP3BA6NNM3 1639 aa27.4■■□□□ 1.98
AP3M1-204ENST00000487653 RIMBP3Q9UFD9 1639 aa27.4■■□□□ 1.98
AP3M1-204ENST00000487653 WDR97A6NE52 1622 aa27.39■■□□□ 1.98
AP3M1-204ENST00000487653 CHD1O14646 1710 aa27.38■■□□□ 1.97
AP3M1-204ENST00000487653 ARHGEF11O15085 1522 aa27.36■■□□□ 1.97
AP3M1-204ENST00000487653 SNAPC4Q5SXM2 1469 aa27.32■■□□□ 1.96
AP3M1-204ENST00000487653 GRIN2BQ13224 1484 aa27.3■■□□□ 1.96
AP3M1-204ENST00000487653 CHMP7Q8WUX9 453 aaPredicted RBP27.28■■□□□ 1.96
AP3M1-204ENST00000487653 MAGI1Q96QZ7 1491 aaPredicted RBP27.27■■□□□ 1.96
AP3M1-204ENST00000487653 ABCA10Q8WWZ4 1543 aa27.23■■□□□ 1.95
AP3M1-204ENST00000487653 GAPVD1Q14C86 1478 aa27.23■■□□□ 1.95
AP3M1-204ENST00000487653 CYB5RLQ6IPT4 315 aa27.21■■□□□ 1.95
AP3M1-204ENST00000487653 SYNJ2O15056 1496 aa27.18■■□□□ 1.94
AP3M1-204ENST00000487653 WRNQ14191 1432 aaPredicted RBP eCLIP27.17■■□□□ 1.94
AP3M1-204ENST00000487653 SYNJ1O43426 1573 aa27.14■■□□□ 1.93
AP3M1-204ENST00000487653 PBRM1Q86U86 1689 aa27.13■■□□□ 1.93
AP3M1-204ENST00000487653 ABCA5Q8WWZ7 1642 aa27.12■■□□□ 1.93
AP3M1-204ENST00000487653 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
AP3M1-204ENST00000487653 CLASP1Q7Z460 1538 aa27.11■■□□□ 1.93
AP3M1-204ENST00000487653 BIVM-ERCC5R4GMW8 1640 aa27.1■■□□□ 1.93
AP3M1-204ENST00000487653 ARAP1Q96P48 1450 aa27.1■■□□□ 1.93
AP3M1-204ENST00000487653 GRIN2AQ12879 1464 aa26.93■■□□□ 1.9
AP3M1-204ENST00000487653 ADAMTS12P58397 1594 aa26.91■■□□□ 1.9
AP3M1-204ENST00000487653 FHAD1B1AJZ9 1412 aa26.9■■□□□ 1.9
AP3M1-204ENST00000487653 ERICH3Q5RHP9 1530 aa26.89■■□□□ 1.89
AP3M1-204ENST00000487653 NUP160Q12769 1436 aa26.85■■□□□ 1.89
AP3M1-204ENST00000487653 TRHP20396 242 aaPredicted RBP26.85■■□□□ 1.89
AP3M1-204ENST00000487653 CEP170Q5SW79 1584 aa26.8■■□□□ 1.88
AP3M1-204ENST00000487653 ERCC6L2Q5T890 1561 aa26.7■■□□□ 1.86
AP3M1-204ENST00000487653 SHROOM2Q13796 1616 aa26.66■■□□□ 1.86
AP3M1-204ENST00000487653 KIF27Q86VH2 1401 aa26.65■■□□□ 1.86
AP3M1-204ENST00000487653 JPH4Q96JJ6 628 aa26.63■■□□□ 1.85
AP3M1-204ENST00000487653 IGF1RP08069 1367 aa26.62■■□□□ 1.85
AP3M1-204ENST00000487653 PRG4Q92954 1404 aaPredicted RBP26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms