RNA–Protein interactions for RNA: ENST00000487622.5

UMPS-207, Transcript of uridine monophosphate synthetase, humanhuman

TSL 2

Gene UMPS, Length 799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UMPS-207ENST00000487622 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.42
UMPS-207ENST00000487622 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
UMPS-207ENST00000487622 AEBP2Q6ZN18 517 aaPredicted RBP21.06■□□□□ 0.96
UMPS-207ENST00000487622 ABCC9O60706 1549 aa20.46■□□□□ 0.87
UMPS-207ENST00000487622 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
UMPS-207ENST00000487622 ZCCHC6Q5VYS8 1495 aaKnown RBP19.96■□□□□ 0.79
UMPS-207ENST00000487622 NACADO15069 1562 aa19.84■□□□□ 0.77
UMPS-207ENST00000487622 MYO15BQ96JP2 1530 aa19.81■□□□□ 0.76
UMPS-207ENST00000487622 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
UMPS-207ENST00000487622 RB1CC1Q8TDY2 1594 aa19.8■□□□□ 0.76
UMPS-207ENST00000487622 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
UMPS-207ENST00000487622 UNC13AQ9UPW8 1703 aa19.54■□□□□ 0.72
UMPS-207ENST00000487622 SCRIBQ14160 1630 aa19.32■□□□□ 0.68
UMPS-207ENST00000487622 BICRAQ9NZM4 1560 aa19.28■□□□□ 0.68
UMPS-207ENST00000487622 DNAJC5BQ9UF47 199 aa19.28■□□□□ 0.68
UMPS-207ENST00000487622 PABPN1Q86U42 306 aaKnown RBP eCLIP19.11■□□□□ 0.65
UMPS-207ENST00000487622 SHROOM4Q9ULL8 1493 aa19.02■□□□□ 0.63
UMPS-207ENST00000487622 EIF4G1Q04637 1599 aaKnown RBP18.7■□□□□ 0.58
UMPS-207ENST00000487622 CECR2Q9BXF3 1484 aa18.59■□□□□ 0.57
UMPS-207ENST00000487622 CC2D2AQ9P2K1 1620 aa18.59■□□□□ 0.57
UMPS-207ENST00000487622 SMARCA4P51532 1647 aa18.53■□□□□ 0.56
UMPS-207ENST00000487622 BAZ1AQ9NRL2 1556 aaPredicted RBP18.49■□□□□ 0.55
UMPS-207ENST00000487622 MROH2BQ7Z745 1585 aa18.43■□□□□ 0.54
UMPS-207ENST00000487622 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
UMPS-207ENST00000487622 ATAD2BQ9ULI0 1458 aa18.33■□□□□ 0.53
UMPS-207ENST00000487622 SMARCA2P51531 1590 aa18.31■□□□□ 0.52
UMPS-207ENST00000487622 NCAPD3P42695 1498 aa18.29■□□□□ 0.52
UMPS-207ENST00000487622 WIZO95785 1651 aa18.28■□□□□ 0.52
UMPS-207ENST00000487622 RSF1Q96T23 1441 aaPredicted RBP18.26■□□□□ 0.51
UMPS-207ENST00000487622 HMGXB3Q12766 1538 aa18.25■□□□□ 0.51
UMPS-207ENST00000487622 BAZ1BQ9UIG0 1483 aaKnown RBP18.16■□□□□ 0.5
UMPS-207ENST00000487622 TOP2AP11388 1531 aaKnown RBP18.05■□□□□ 0.48
UMPS-207ENST00000487622 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
UMPS-207ENST00000487622 SUPT5HO00267 1087 aaKnown RBP17.82■□□□□ 0.44
UMPS-207ENST00000487622 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
UMPS-207ENST00000487622 NESP48681 1621 aa17.81■□□□□ 0.44
UMPS-207ENST00000487622 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
UMPS-207ENST00000487622 PRDM2Q13029 1718 aa17.74■□□□□ 0.43
UMPS-207ENST00000487622 CADPSQ9ULU8 1353 aa17.73■□□□□ 0.43
UMPS-207ENST00000487622 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
UMPS-207ENST00000487622 CFTRP13569 1480 aa17.7■□□□□ 0.42
UMPS-207ENST00000487622 KIF21AQ7Z4S6 1674 aa17.68■□□□□ 0.42
UMPS-207ENST00000487622 DNAJC5Q9H3Z4 198 aa17.64■□□□□ 0.41
UMPS-207ENST00000487622 PDS5BQ9NTI5 1447 aa17.58■□□□□ 0.41
UMPS-207ENST00000487622 ERCC6Q03468 1493 aa17.56■□□□□ 0.4
UMPS-207ENST00000487622 THOC2Q8NI27 1593 aaKnown RBP17.55■□□□□ 0.4
UMPS-207ENST00000487622 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
UMPS-207ENST00000487622 CEP164Q9UPV0 1460 aa17.5■□□□□ 0.39
UMPS-207ENST00000487622 CUX2O14529 1486 aa17.47■□□□□ 0.39
UMPS-207ENST00000487622 MRC2Q9UBG0 1479 aa17.44■□□□□ 0.38
UMPS-207ENST00000487622 WDR62O43379 1518 aa17.42■□□□□ 0.38
UMPS-207ENST00000487622 URB2Q14146 1524 aaKnown RBP17.4■□□□□ 0.38
UMPS-207ENST00000487622 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
UMPS-207ENST00000487622 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
UMPS-207ENST00000487622 CUX1P39880 1505 aa17.29■□□□□ 0.36
UMPS-207ENST00000487622 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
UMPS-207ENST00000487622 BIVM-ERCC5R4GMW8 1640 aa17.22■□□□□ 0.35
UMPS-207ENST00000487622 SYNJ1O43426 1573 aa17.21■□□□□ 0.35
UMPS-207ENST00000487622 TOP2BQ02880 1626 aa17.19■□□□□ 0.34
UMPS-207ENST00000487622 POLA1P09884 1462 aaPredicted RBP17.18■□□□□ 0.34
UMPS-207ENST00000487622 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.34
UMPS-207ENST00000487622 TARBP1Q13395 1621 aaKnown RBP17.17■□□□□ 0.34
UMPS-207ENST00000487622 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
UMPS-207ENST00000487622 WDR97A6NE52 1622 aa17.13■□□□□ 0.33
UMPS-207ENST00000487622 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
UMPS-207ENST00000487622 RAD54L2Q9Y4B4 1467 aa17.09■□□□□ 0.33
UMPS-207ENST00000487622 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
UMPS-207ENST00000487622 SOGA1O94964 1423 aa17.05■□□□□ 0.32
UMPS-207ENST00000487622 EIF4G3O43432 1585 aaKnown RBP17.03■□□□□ 0.32
UMPS-207ENST00000487622 ABCA10Q8WWZ4 1543 aa17.01■□□□□ 0.31
UMPS-207ENST00000487622 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
UMPS-207ENST00000487622 AQRO60306 1485 aaKnown RBP eCLIP16.96■□□□□ 0.31
UMPS-207ENST00000487622 PBRM1Q86U86 1689 aa16.95■□□□□ 0.3
UMPS-207ENST00000487622 TDRD9Q8NDG6 1382 aaKnown RBP16.93■□□□□ 0.3
UMPS-207ENST00000487622 GAPVD1Q14C86 1478 aa16.89■□□□□ 0.29
UMPS-207ENST00000487622 GRIN2BQ13224 1484 aa16.85■□□□□ 0.29
UMPS-207ENST00000487622 CHD1O14646 1710 aa16.84■□□□□ 0.29
UMPS-207ENST00000487622 ERICH3Q5RHP9 1530 aa16.81■□□□□ 0.28
UMPS-207ENST00000487622 SNAPC4Q5SXM2 1469 aa16.81■□□□□ 0.28
UMPS-207ENST00000487622 TRIM41Q8WV44 630 aa16.81■□□□□ 0.28
UMPS-207ENST00000487622 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
UMPS-207ENST00000487622 ADAMTS12P58397 1594 aa16.78■□□□□ 0.28
UMPS-207ENST00000487622 KIF27Q86VH2 1401 aa16.78■□□□□ 0.28
UMPS-207ENST00000487622 RUSC2Q8N2Y8 1516 aa16.76■□□□□ 0.27
UMPS-207ENST00000487622 FOXD1Q16676 465 aa16.73■□□□□ 0.27
UMPS-207ENST00000487622 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
UMPS-207ENST00000487622 IGF1RP08069 1367 aa16.72■□□□□ 0.27
UMPS-207ENST00000487622 CUL7Q14999 1698 aa16.72■□□□□ 0.27
UMPS-207ENST00000487622 FHAD1B1AJZ9 1412 aa16.69■□□□□ 0.26
UMPS-207ENST00000487622 OSCARQ8IYS5 282 aa16.66■□□□□ 0.26
UMPS-207ENST00000487622 GRIN2AQ12879 1464 aa16.66■□□□□ 0.26
UMPS-207ENST00000487622 CLASP1Q7Z460 1538 aa16.61■□□□□ 0.25
UMPS-207ENST00000487622 CEP170Q5SW79 1584 aa16.61■□□□□ 0.25
UMPS-207ENST00000487622 CHMP7Q8WUX9 453 aaPredicted RBP16.6■□□□□ 0.25
UMPS-207ENST00000487622 CARMIL1Q5VZK9 1371 aa16.6■□□□□ 0.25
UMPS-207ENST00000487622 NUP160Q12769 1436 aa16.6■□□□□ 0.25
UMPS-207ENST00000487622 FBLN2P98095 1184 aa16.59■□□□□ 0.25
UMPS-207ENST00000487622 EEA1Q15075 1411 aa16.59■□□□□ 0.25
UMPS-207ENST00000487622 PRXQ9BXM0 1461 aa16.57■□□□□ 0.24
UMPS-207ENST00000487622 RIMBP3CA6NJZ7 1639 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms