RNA–Protein interactions for RNA: ENST00000487297.5

SETD4-217, Transcript of SET domain containing 4, humanhuman

TSL 2

Gene SETD4, Length 3,358 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD4-217ENST00000487297 NISCHQ9Y2I1 1504 aa19.78■□□□□ 0.76
SETD4-217ENST00000487297 DCAF8L2P0C7V8 631 aa17.64■□□□□ 0.41
SETD4-217ENST00000487297 HRCP23327 699 aa17.62■□□□□ 0.41
SETD4-217ENST00000487297 SHROOM4Q9ULL8 1493 aa17.59■□□□□ 0.41
SETD4-217ENST00000487297 PPARGC1BQ86YN6 1023 aaKnown RBP17.37■□□□□ 0.37
SETD4-217ENST00000487297 MYO15BQ96JP2 1530 aa17.33■□□□□ 0.36
SETD4-217ENST00000487297 PCGF6Q9BYE7 350 aa17.22■□□□□ 0.35
SETD4-217ENST00000487297 SUPT5HO00267 1087 aaKnown RBP17.22■□□□□ 0.35
SETD4-217ENST00000487297 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.31
SETD4-217ENST00000487297 PELP1Q8IZL8 1130 aaKnown RBP16.89■□□□□ 0.3
SETD4-217ENST00000487297 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
SETD4-217ENST00000487297 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
SETD4-217ENST00000487297 LOC105371045A0A1W2PR82 267 aa16.67■□□□□ 0.26
SETD4-217ENST00000487297 CCDC180Q9P1Z9 1646 aa16.66■□□□□ 0.26
SETD4-217ENST00000487297 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
SETD4-217ENST00000487297 TRIM26Q12899 539 aaPredicted RBP16.58■□□□□ 0.25
SETD4-217ENST00000487297 MYT1Q01538 1121 aa16.46■□□□□ 0.22
SETD4-217ENST00000487297 ABCC9O60706 1549 aa16.37■□□□□ 0.21
SETD4-217ENST00000487297 ZEB1P37275 1124 aaPredicted RBP16.36■□□□□ 0.21
SETD4-217ENST00000487297 NEUROD1Q13562 356 aa16.27■□□□□ 0.2
SETD4-217ENST00000487297 ACIN1Q9UKV3 1341 aaKnown RBP16.25■□□□□ 0.19
SETD4-217ENST00000487297 EHMT2Q96KQ7 1210 aa16.24■□□□□ 0.19
SETD4-217ENST00000487297 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
SETD4-217ENST00000487297 SCRIBQ14160 1630 aa16.06■□□□□ 0.16
SETD4-217ENST00000487297 FAM9AQ8IZU1 332 aaPredicted RBP16.06■□□□□ 0.16
SETD4-217ENST00000487297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.95■□□□□ 0.14
SETD4-217ENST00000487297 DIEXFQ68CQ4 756 aaKnown RBP15.91■□□□□ 0.14
SETD4-217ENST00000487297 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
SETD4-217ENST00000487297 CENPBP07199 599 aaPredicted RBP15.88■□□□□ 0.13
SETD4-217ENST00000487297 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
SETD4-217ENST00000487297 TTBK1Q5TCY1 1321 aaPredicted RBP15.82■□□□□ 0.12
SETD4-217ENST00000487297 CCER1Q8TC90 406 aaPredicted RBP15.82■□□□□ 0.12
SETD4-217ENST00000487297 RB1CC1Q8TDY2 1594 aa15.77■□□□□ 0.12
SETD4-217ENST00000487297 RSF1Q96T23 1441 aaPredicted RBP15.74■□□□□ 0.11
SETD4-217ENST00000487297 CECR2Q9BXF3 1484 aa15.73■□□□□ 0.11
SETD4-217ENST00000487297 YTHDC1Q96MU7 727 aaKnown RBP15.69■□□□□ 0.1
SETD4-217ENST00000487297 ZNF316A6NFI3 1004 aaPredicted RBP15.57■□□□□ 0.08
SETD4-217ENST00000487297 MIER1Q8N108 512 aa15.57■□□□□ 0.08
SETD4-217ENST00000487297 NACADO15069 1562 aa15.54■□□□□ 0.08
SETD4-217ENST00000487297 MROH2BQ7Z745 1585 aa15.52■□□□□ 0.08
SETD4-217ENST00000487297 WRNQ14191 1432 aaPredicted RBP eCLIP15.41■□□□□ 0.06
SETD4-217ENST00000487297 RANGAP1P46060 587 aaPredicted RBP15.41■□□□□ 0.06
SETD4-217ENST00000487297 BCL11AQ9H165 835 aa15.39■□□□□ 0.05
SETD4-217ENST00000487297 WIZO95785 1651 aa15.38■□□□□ 0.05
SETD4-217ENST00000487297 SUPT16HQ9Y5B9 1047 aaKnown RBP15.36■□□□□ 0.05
SETD4-217ENST00000487297 EIF4G1Q04637 1599 aaKnown RBP15.34■□□□□ 0.05
SETD4-217ENST00000487297 TSHZ2Q9NRE2 1034 aa15.33■□□□□ 0.05
SETD4-217ENST00000487297 ANP32EQ9BTT0 268 aa15.33■□□□□ 0.04
SETD4-217ENST00000487297 CEP162Q5TB80 1403 aa15.32■□□□□ 0.04
SETD4-217ENST00000487297 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
SETD4-217ENST00000487297 UBTFP17480 764 aaKnown RBP15.24■□□□□ 0.03
SETD4-217ENST00000487297 PRKCSHP14314 528 aaPredicted RBP15.24■□□□□ 0.03
SETD4-217ENST00000487297 ABCC8Q09428 1581 aa15.22■□□□□ 0.03
SETD4-217ENST00000487297 CCDC88BA6NC98 1476 aa15.21■□□□□ 0.03
SETD4-217ENST00000487297 BAZ1AQ9NRL2 1556 aaPredicted RBP15.17■□□□□ 0.02
SETD4-217ENST00000487297 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
SETD4-217ENST00000487297 SOGA1O94964 1423 aa15.16■□□□□ 0.02
SETD4-217ENST00000487297 TNIKQ9UKE5 1360 aa15.16■□□□□ 0.02
SETD4-217ENST00000487297 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
SETD4-217ENST00000487297 RUSC2Q8N2Y8 1516 aa15.12■□□□□ 0.01
SETD4-217ENST00000487297 SMARCA4P51532 1647 aa15.05■□□□□ -0
SETD4-217ENST00000487297 SLC24A1O60721 1099 aa15.04■□□□□ -0
SETD4-217ENST00000487297 KCNH8Q96L42 1107 aa15.03■□□□□ -0
SETD4-217ENST00000487297 UNC13AQ9UPW8 1703 aa15.02□□□□□ -0.01
SETD4-217ENST00000487297 BCANQ96GW7 911 aa15.01□□□□□ -0.01
SETD4-217ENST00000487297 BICRAQ9NZM4 1560 aa14.99□□□□□ -0.01
SETD4-217ENST00000487297 ERICH6Q7L0X2 663 aa14.98□□□□□ -0.01
SETD4-217ENST00000487297 GOLGA3Q08378 1498 aa14.96□□□□□ -0.02
SETD4-217ENST00000487297 TOP2AP11388 1531 aaKnown RBP14.96□□□□□ -0.02
SETD4-217ENST00000487297 DHX57Q6P158 1386 aaKnown RBP14.95□□□□□ -0.02
SETD4-217ENST00000487297 RBM19Q9Y4C8 960 aaKnown RBP14.92□□□□□ -0.02
SETD4-217ENST00000487297 SMARCA2P51531 1590 aa14.92□□□□□ -0.02
SETD4-217ENST00000487297 BAZ1BQ9UIG0 1483 aaKnown RBP14.92□□□□□ -0.02
SETD4-217ENST00000487297 MSH5O43196 834 aa14.9□□□□□ -0.02
SETD4-217ENST00000487297 APLP2Q06481 763 aa14.9□□□□□ -0.02
SETD4-217ENST00000487297 CLIP1P30622 1438 aa14.9□□□□□ -0.02
SETD4-217ENST00000487297 EEA1Q15075 1411 aa14.9□□□□□ -0.02
SETD4-217ENST00000487297 FKBP8Q14318 412 aa14.89□□□□□ -0.03
SETD4-217ENST00000487297 ATAD2BQ9ULI0 1458 aa14.88□□□□□ -0.03
SETD4-217ENST00000487297 VPS8Q8N3P4 1428 aa14.86□□□□□ -0.03
SETD4-217ENST00000487297 ITGAEP38570 1179 aa14.82□□□□□ -0.04
SETD4-217ENST00000487297 KIF21BO75037 1637 aa14.81□□□□□ -0.04
SETD4-217ENST00000487297 CEP164Q9UPV0 1460 aa14.78□□□□□ -0.04
SETD4-217ENST00000487297 ATP1B4Q9UN42 357 aaPredicted RBP14.77□□□□□ -0.04
SETD4-217ENST00000487297 RAPGEF2Q9Y4G8 1499 aa14.73□□□□□ -0.05
SETD4-217ENST00000487297 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
SETD4-217ENST00000487297 P3H3Q8IVL6 736 aa14.69□□□□□ -0.06
SETD4-217ENST00000487297 DNAJC5BQ9UF47 199 aa14.69□□□□□ -0.06
SETD4-217ENST00000487297 KANK4Q5T7N3 995 aaPredicted RBP14.68□□□□□ -0.06
SETD4-217ENST00000487297 MAPKBP1O60336 1514 aa14.67□□□□□ -0.06
SETD4-217ENST00000487297 TRIM52Q96A61 297 aa14.67□□□□□ -0.06
SETD4-217ENST00000487297 DDX10Q13206 875 aaKnown RBP14.66□□□□□ -0.06
SETD4-217ENST00000487297 CUX2O14529 1486 aa14.66□□□□□ -0.06
SETD4-217ENST00000487297 WDR97A6NE52 1622 aa14.63□□□□□ -0.07
SETD4-217ENST00000487297 RRBP1Q9P2E9 1410 aaKnown RBP14.63□□□□□ -0.07
SETD4-217ENST00000487297 FANCIQ9NVI1 1328 aa14.62□□□□□ -0.07
SETD4-217ENST00000487297 ARAP1Q96P48 1450 aa14.62□□□□□ -0.07
SETD4-217ENST00000487297 PPP1R15AO75807 674 aaPredicted RBP14.6□□□□□ -0.07
SETD4-217ENST00000487297 NEFLP07196 543 aa14.6□□□□□ -0.07
SETD4-217ENST00000487297 HIRIP3Q9BW71 556 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms