RNA–Protein interactions for RNA: ENST00000486670.1

ARHGEF11-205, Transcript of Rho guanine nucleotide exchange factor 11, humanhuman

TSL 3

Gene ARHGEF11, Length 859 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF11-205ENST00000486670 NISCHQ9Y2I1 1504 aa31.29■■■□□ 2.6
ARHGEF11-205ENST00000486670 CCDC180Q9P1Z9 1646 aa28.05■■■□□ 2.08
ARHGEF11-205ENST00000486670 ABCC9O60706 1549 aa27.92■■■□□ 2.06
ARHGEF11-205ENST00000486670 RB1CC1Q8TDY2 1594 aa26.67■■□□□ 1.86
ARHGEF11-205ENST00000486670 NACADO15069 1562 aa26.54■■□□□ 1.84
ARHGEF11-205ENST00000486670 MYO15BQ96JP2 1530 aa26.3■■□□□ 1.8
ARHGEF11-205ENST00000486670 DNAJC5BQ9UF47 199 aa26.2■■□□□ 1.78
ARHGEF11-205ENST00000486670 DCAF8L2P0C7V8 631 aa26.15■■□□□ 1.78
ARHGEF11-205ENST00000486670 PABPN1Q86U42 306 aaKnown RBP eCLIP25.97■■□□□ 1.75
ARHGEF11-205ENST00000486670 ZCCHC6Q5VYS8 1495 aaKnown RBP25.97■■□□□ 1.75
ARHGEF11-205ENST00000486670 UNC13AQ9UPW8 1703 aa25.96■■□□□ 1.75
ARHGEF11-205ENST00000486670 DCAF1Q9Y4B6 1507 aa25.94■■□□□ 1.74
ARHGEF11-205ENST00000486670 BICRAQ9NZM4 1560 aa25.91■■□□□ 1.74
ARHGEF11-205ENST00000486670 SHROOM4Q9ULL8 1493 aa25.7■■□□□ 1.7
ARHGEF11-205ENST00000486670 SCRIBQ14160 1630 aa25.45■■□□□ 1.67
ARHGEF11-205ENST00000486670 EIF4G1Q04637 1599 aaKnown RBP25.26■■□□□ 1.63
ARHGEF11-205ENST00000486670 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
ARHGEF11-205ENST00000486670 CECR2Q9BXF3 1484 aa25.2■■□□□ 1.62
ARHGEF11-205ENST00000486670 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
ARHGEF11-205ENST00000486670 ATAD2BQ9ULI0 1458 aa24.42■■□□□ 1.5
ARHGEF11-205ENST00000486670 SMARCA4P51532 1647 aa24.36■■□□□ 1.49
ARHGEF11-205ENST00000486670 SMARCA2P51531 1590 aa24.34■■□□□ 1.49
ARHGEF11-205ENST00000486670 HMGXB3Q12766 1538 aa24.34■■□□□ 1.49
ARHGEF11-205ENST00000486670 BAZ1AQ9NRL2 1556 aaPredicted RBP24.28■■□□□ 1.48
ARHGEF11-205ENST00000486670 PEG3Q9GZU2 1588 aa24.23■■□□□ 1.47
ARHGEF11-205ENST00000486670 CUX2O14529 1486 aa24.17■■□□□ 1.46
ARHGEF11-205ENST00000486670 BAZ1BQ9UIG0 1483 aaKnown RBP24.13■■□□□ 1.45
ARHGEF11-205ENST00000486670 ERCC6Q03468 1493 aa24.1■■□□□ 1.45
ARHGEF11-205ENST00000486670 DNAJC5Q9H3Z4 198 aa24.07■■□□□ 1.44
ARHGEF11-205ENST00000486670 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
ARHGEF11-205ENST00000486670 NESP48681 1621 aa24.01■■□□□ 1.43
ARHGEF11-205ENST00000486670 LAMC3Q9Y6N6 1575 aa23.92■■□□□ 1.42
ARHGEF11-205ENST00000486670 THOC2Q8NI27 1593 aaKnown RBP23.81■■□□□ 1.4
ARHGEF11-205ENST00000486670 PDS5BQ9NTI5 1447 aa23.78■■□□□ 1.4
ARHGEF11-205ENST00000486670 CADPSQ9ULU8 1353 aa23.75■■□□□ 1.39
ARHGEF11-205ENST00000486670 WIZO95785 1651 aa23.72■■□□□ 1.39
ARHGEF11-205ENST00000486670 KIF21AQ7Z4S6 1674 aa23.66■■□□□ 1.38
ARHGEF11-205ENST00000486670 RSF1Q96T23 1441 aaPredicted RBP23.62■■□□□ 1.37
ARHGEF11-205ENST00000486670 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
ARHGEF11-205ENST00000486670 WDR62O43379 1518 aa23.54■■□□□ 1.36
ARHGEF11-205ENST00000486670 CFTRP13569 1480 aa23.51■■□□□ 1.35
ARHGEF11-205ENST00000486670 TOP2AP11388 1531 aaKnown RBP23.51■■□□□ 1.35
ARHGEF11-205ENST00000486670 CEP164Q9UPV0 1460 aa23.46■■□□□ 1.35
ARHGEF11-205ENST00000486670 FANCD2Q9BXW9 1451 aa23.44■■□□□ 1.34
ARHGEF11-205ENST00000486670 URB2Q14146 1524 aaKnown RBP23.25■■□□□ 1.31
ARHGEF11-205ENST00000486670 CCDC88BA6NC98 1476 aa23.22■■□□□ 1.31
ARHGEF11-205ENST00000486670 PRDM2Q13029 1718 aa23.14■■□□□ 1.3
ARHGEF11-205ENST00000486670 IFT140Q96RY7 1462 aa23.02■■□□□ 1.28
ARHGEF11-205ENST00000486670 TOPBP1Q92547 1522 aa23■■□□□ 1.27
ARHGEF11-205ENST00000486670 ABCC8Q09428 1581 aa23■■□□□ 1.27
ARHGEF11-205ENST00000486670 OSCARQ8IYS5 282 aa22.99■■□□□ 1.27
ARHGEF11-205ENST00000486670 ZNF608Q9ULD9 1512 aaPredicted RBP22.93■■□□□ 1.26
ARHGEF11-205ENST00000486670 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
ARHGEF11-205ENST00000486670 TRIM41Q8WV44 630 aa22.85■■□□□ 1.25
ARHGEF11-205ENST00000486670 TARBP1Q13395 1621 aaKnown RBP22.81■■□□□ 1.24
ARHGEF11-205ENST00000486670 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
ARHGEF11-205ENST00000486670 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
ARHGEF11-205ENST00000486670 AQRO60306 1485 aaKnown RBP eCLIP22.72■■□□□ 1.23
ARHGEF11-205ENST00000486670 RIMBP3CA6NJZ7 1639 aa22.66■■□□□ 1.22
ARHGEF11-205ENST00000486670 RIMBP3BA6NNM3 1639 aa22.66■■□□□ 1.22
ARHGEF11-205ENST00000486670 RIMBP3Q9UFD9 1639 aa22.66■■□□□ 1.22
ARHGEF11-205ENST00000486670 WDR97A6NE52 1622 aa22.65■■□□□ 1.22
ARHGEF11-205ENST00000486670 ARHGEF11O15085 1522 aa22.65■■□□□ 1.22
ARHGEF11-205ENST00000486670 SOGA1O94964 1423 aa22.65■■□□□ 1.22
ARHGEF11-205ENST00000486670 RAD54L2Q9Y4B4 1467 aa22.64■■□□□ 1.21
ARHGEF11-205ENST00000486670 CUX1P39880 1505 aa22.62■■□□□ 1.21
ARHGEF11-205ENST00000486670 FGD5Q6ZNL6 1462 aa22.61■■□□□ 1.21
ARHGEF11-205ENST00000486670 TDRD9Q8NDG6 1382 aaKnown RBP22.58■■□□□ 1.21
ARHGEF11-205ENST00000486670 CHD1O14646 1710 aa22.55■■□□□ 1.2
ARHGEF11-205ENST00000486670 MAGI1Q96QZ7 1491 aaPredicted RBP22.51■■□□□ 1.19
ARHGEF11-205ENST00000486670 SNAPC4Q5SXM2 1469 aa22.5■■□□□ 1.19
ARHGEF11-205ENST00000486670 GRIN2BQ13224 1484 aa22.48■■□□□ 1.19
ARHGEF11-205ENST00000486670 FBLN2P98095 1184 aa22.45■■□□□ 1.18
ARHGEF11-205ENST00000486670 CLASP1Q7Z460 1538 aa22.43■■□□□ 1.18
ARHGEF11-205ENST00000486670 ARAP1Q96P48 1450 aa22.43■■□□□ 1.18
ARHGEF11-205ENST00000486670 ABCA10Q8WWZ4 1543 aa22.42■■□□□ 1.18
ARHGEF11-205ENST00000486670 SYNJ2O15056 1496 aa22.41■■□□□ 1.18
ARHGEF11-205ENST00000486670 SUPT5HO00267 1087 aaKnown RBP22.41■■□□□ 1.18
ARHGEF11-205ENST00000486670 CYB5RLQ6IPT4 315 aa22.39■■□□□ 1.17
ARHGEF11-205ENST00000486670 GAPVD1Q14C86 1478 aa22.39■■□□□ 1.17
ARHGEF11-205ENST00000486670 CHMP7Q8WUX9 453 aaPredicted RBP22.38■■□□□ 1.17
ARHGEF11-205ENST00000486670 SYNJ1O43426 1573 aa22.37■■□□□ 1.17
ARHGEF11-205ENST00000486670 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
ARHGEF11-205ENST00000486670 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
ARHGEF11-205ENST00000486670 PBRM1Q86U86 1689 aa22.3■■□□□ 1.16
ARHGEF11-205ENST00000486670 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
ARHGEF11-205ENST00000486670 BIVM-ERCC5R4GMW8 1640 aa22.26■■□□□ 1.15
ARHGEF11-205ENST00000486670 GRIN2AQ12879 1464 aa22.19■■□□□ 1.14
ARHGEF11-205ENST00000486670 ADAMTS12P58397 1594 aa22.17■■□□□ 1.14
ARHGEF11-205ENST00000486670 NUP160Q12769 1436 aa22.16■■□□□ 1.14
ARHGEF11-205ENST00000486670 ERICH3Q5RHP9 1530 aa22.14■■□□□ 1.13
ARHGEF11-205ENST00000486670 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.13
ARHGEF11-205ENST00000486670 CEP170Q5SW79 1584 aa22.08■■□□□ 1.13
ARHGEF11-205ENST00000486670 TRHP20396 242 aaPredicted RBP22.07■■□□□ 1.12
ARHGEF11-205ENST00000486670 SHROOM2Q13796 1616 aa22.03■■□□□ 1.12
ARHGEF11-205ENST00000486670 ERCC6L2Q5T890 1561 aa22■■□□□ 1.11
ARHGEF11-205ENST00000486670 PRG4Q92954 1404 aaPredicted RBP21.87■■□□□ 1.09
ARHGEF11-205ENST00000486670 RUSC2Q8N2Y8 1516 aa21.86■■□□□ 1.09
ARHGEF11-205ENST00000486670 JPH4Q96JJ6 628 aa21.86■■□□□ 1.09
ARHGEF11-205ENST00000486670 IGF1RP08069 1367 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms