RNA–Protein interactions for RNA: ENST00000486616.5

VILL-209, Transcript of villin like, humanhuman

TSL 2

Gene VILL, Length 4,439 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VILL-209ENST00000486616 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
VILL-209ENST00000486616 DCAF8L2P0C7V8 631 aa26.06■■□□□ 1.76
VILL-209ENST00000486616 SUPT5HO00267 1087 aaKnown RBP24.47■■□□□ 1.51
VILL-209ENST00000486616 SHROOM4Q9ULL8 1493 aa24.46■■□□□ 1.51
VILL-209ENST00000486616 EHMT2Q96KQ7 1210 aa23.11■■□□□ 1.29
VILL-209ENST00000486616 ABCC9O60706 1549 aa23.04■■□□□ 1.28
VILL-209ENST00000486616 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
VILL-209ENST00000486616 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
VILL-209ENST00000486616 APLP2Q06481 763 aa22.81■■□□□ 1.24
VILL-209ENST00000486616 PABPN1Q86U42 306 aaKnown RBP eCLIP22.52■■□□□ 1.2
VILL-209ENST00000486616 CCDC180Q9P1Z9 1646 aa22.5■■□□□ 1.19
VILL-209ENST00000486616 UBTFP17480 764 aaKnown RBP22.41■■□□□ 1.18
VILL-209ENST00000486616 RANGAP1P46060 587 aaPredicted RBP22.37■■□□□ 1.17
VILL-209ENST00000486616 ZCCHC6Q5VYS8 1495 aaKnown RBP22.31■■□□□ 1.16
VILL-209ENST00000486616 TTBK1Q5TCY1 1321 aaPredicted RBP22.23■■□□□ 1.15
VILL-209ENST00000486616 ATP1B4Q9UN42 357 aaPredicted RBP22.17■■□□□ 1.14
VILL-209ENST00000486616 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
VILL-209ENST00000486616 PCGF6Q9BYE7 350 aa22.11■■□□□ 1.13
VILL-209ENST00000486616 SCRIBQ14160 1630 aa21.97■■□□□ 1.11
VILL-209ENST00000486616 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
VILL-209ENST00000486616 LOC105371045A0A1W2PR82 267 aa21.79■■□□□ 1.08
VILL-209ENST00000486616 NACADO15069 1562 aa21.75■■□□□ 1.07
VILL-209ENST00000486616 CCER1Q8TC90 406 aaPredicted RBP21.74■■□□□ 1.07
VILL-209ENST00000486616 ZEB1P37275 1124 aaPredicted RBP21.72■■□□□ 1.07
VILL-209ENST00000486616 PPARGC1BQ86YN6 1023 aaKnown RBP21.66■■□□□ 1.06
VILL-209ENST00000486616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.63■■□□□ 1.05
VILL-209ENST00000486616 HNRNPUL2Q1KMD3 747 aaKnown RBP21.63■■□□□ 1.05
VILL-209ENST00000486616 TRIM26Q12899 539 aaPredicted RBP21.58■■□□□ 1.05
VILL-209ENST00000486616 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
VILL-209ENST00000486616 ITGAEP38570 1179 aa21.38■■□□□ 1.01
VILL-209ENST00000486616 CSRNP3Q8WYN3 585 aa21.36■■□□□ 1.01
VILL-209ENST00000486616 MYT1LQ9UL68 1186 aa21.31■■□□□ 1
VILL-209ENST00000486616 FBLN2P98095 1184 aa21.3■■□□□ 1
VILL-209ENST00000486616 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
VILL-209ENST00000486616 PELP1Q8IZL8 1130 aaKnown RBP21.18■□□□□ 0.98
VILL-209ENST00000486616 BAZ1AQ9NRL2 1556 aaPredicted RBP21.12■□□□□ 0.97
VILL-209ENST00000486616 MYO15BQ96JP2 1530 aa21.11■□□□□ 0.97
VILL-209ENST00000486616 BAZ1BQ9UIG0 1483 aaKnown RBP21.11■□□□□ 0.97
VILL-209ENST00000486616 FAM50AQ14320 339 aaKnown RBP21.07■□□□□ 0.96
VILL-209ENST00000486616 CECR2Q9BXF3 1484 aa21.02■□□□□ 0.95
VILL-209ENST00000486616 CENPBP07199 599 aaPredicted RBP21■□□□□ 0.95
VILL-209ENST00000486616 P3H3Q8IVL6 736 aa21■□□□□ 0.95
VILL-209ENST00000486616 HRCP23327 699 aa20.96■□□□□ 0.95
VILL-209ENST00000486616 CDK11AQ9UQ88 783 aaPredicted RBP20.87■□□□□ 0.93
VILL-209ENST00000486616 WRNQ14191 1432 aaPredicted RBP eCLIP20.84■□□□□ 0.93
VILL-209ENST00000486616 TRIM52Q96A61 297 aa20.83■□□□□ 0.92
VILL-209ENST00000486616 EEA1Q15075 1411 aa20.8■□□□□ 0.92
VILL-209ENST00000486616 ARID3CA6NKF2 412 aa20.79■□□□□ 0.92
VILL-209ENST00000486616 MROH2BQ7Z745 1585 aa20.76■□□□□ 0.91
VILL-209ENST00000486616 CHMP7Q8WUX9 453 aaPredicted RBP20.75■□□□□ 0.91
VILL-209ENST00000486616 POLR3GLQ9BT43 218 aa20.72■□□□□ 0.91
VILL-209ENST00000486616 SMARCA2P51531 1590 aa20.71■□□□□ 0.91
VILL-209ENST00000486616 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
VILL-209ENST00000486616 NPM1P06748 294 aaKnown RBP eCLIP20.64■□□□□ 0.89
VILL-209ENST00000486616 YTHDC1Q96MU7 727 aaKnown RBP20.62■□□□□ 0.89
VILL-209ENST00000486616 ZNF777Q9ULD5 760 aaPredicted RBP20.62■□□□□ 0.89
VILL-209ENST00000486616 ERCC6Q03468 1493 aa20.6■□□□□ 0.89
VILL-209ENST00000486616 NEUROD1Q13562 356 aa20.59■□□□□ 0.89
VILL-209ENST00000486616 CLIP1P30622 1438 aa20.59■□□□□ 0.89
VILL-209ENST00000486616 NEFLP07196 543 aa20.58■□□□□ 0.88
VILL-209ENST00000486616 GOLGA3Q08378 1498 aa20.57■□□□□ 0.88
VILL-209ENST00000486616 CCDC88BA6NC98 1476 aa20.56■□□□□ 0.88
VILL-209ENST00000486616 CEP164Q9UPV0 1460 aa20.47■□□□□ 0.87
VILL-209ENST00000486616 MTUS2Q5JR59 1369 aa20.46■□□□□ 0.87
VILL-209ENST00000486616 TOP2AP11388 1531 aaKnown RBP20.46■□□□□ 0.87
VILL-209ENST00000486616 PDS5BQ9NTI5 1447 aa20.46■□□□□ 0.87
VILL-209ENST00000486616 ATAD2BQ9ULI0 1458 aa20.45■□□□□ 0.86
VILL-209ENST00000486616 CEP162Q5TB80 1403 aa20.42■□□□□ 0.86
VILL-209ENST00000486616 TNIKQ9UKE5 1360 aa20.42■□□□□ 0.86
VILL-209ENST00000486616 WIZO95785 1651 aa20.42■□□□□ 0.86
VILL-209ENST00000486616 ZNF326Q5BKZ1 582 aaKnown RBP20.4■□□□□ 0.86
VILL-209ENST00000486616 CNGB1Q14028 1251 aaPredicted RBP20.4■□□□□ 0.86
VILL-209ENST00000486616 SLC4A1APQ9BWU0 796 aaKnown RBP20.39■□□□□ 0.85
VILL-209ENST00000486616 SMARCA4P51532 1647 aa20.39■□□□□ 0.85
VILL-209ENST00000486616 CADPSQ9ULU8 1353 aa20.37■□□□□ 0.85
VILL-209ENST00000486616 CUX2O14529 1486 aa20.37■□□□□ 0.85
VILL-209ENST00000486616 DIEXFQ68CQ4 756 aaKnown RBP20.37■□□□□ 0.85
VILL-209ENST00000486616 CARMIL1Q5VZK9 1371 aa20.33■□□□□ 0.84
VILL-209ENST00000486616 TSPY4P0CV99 314 aa20.33■□□□□ 0.84
VILL-209ENST00000486616 TSPY10P0CW01 314 aa20.33■□□□□ 0.84
VILL-209ENST00000486616 PLEKHD1A6NEE1 506 aa20.31■□□□□ 0.84
VILL-209ENST00000486616 SOGA1O94964 1423 aa20.29■□□□□ 0.84
VILL-209ENST00000486616 ESF1Q9H501 851 aaKnown RBP20.28■□□□□ 0.84
VILL-209ENST00000486616 CHIC2Q9UKJ5 165 aa20.26■□□□□ 0.83
VILL-209ENST00000486616 ABCC8Q09428 1581 aa20.24■□□□□ 0.83
VILL-209ENST00000486616 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
VILL-209ENST00000486616 KCNH8Q96L42 1107 aa20.18■□□□□ 0.82
VILL-209ENST00000486616 TONSLQ96HA7 1378 aa20.17■□□□□ 0.82
VILL-209ENST00000486616 TDRD9Q8NDG6 1382 aaKnown RBP20.15■□□□□ 0.82
VILL-209ENST00000486616 FHAD1B1AJZ9 1412 aa20.14■□□□□ 0.82
VILL-209ENST00000486616 ANP32CO43423 234 aa20.14■□□□□ 0.81
VILL-209ENST00000486616 BCANQ96GW7 911 aa20.14■□□□□ 0.81
VILL-209ENST00000486616 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
VILL-209ENST00000486616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.1■□□□□ 0.81
VILL-209ENST00000486616 CFDP1Q9UEE9 299 aaPredicted RBP20.09■□□□□ 0.81
VILL-209ENST00000486616 CHGAP10645 457 aaKnown RBP20.08■□□□□ 0.8
VILL-209ENST00000486616 ACIN1Q9UKV3 1341 aaKnown RBP20.07■□□□□ 0.8
VILL-209ENST00000486616 STAG3Q9UJ98 1225 aa20.07■□□□□ 0.8
VILL-209ENST00000486616 ERICH6Q7L0X2 663 aa20.06■□□□□ 0.8
VILL-209ENST00000486616 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms