RNA–Protein interactions for RNA: ENST00000485798.5

NUCB1-211, Transcript of nucleobindin 1, humanhuman

TSL 3

Gene NUCB1, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-211ENST00000485798 NISCHQ9Y2I1 1504 aa37.1■■■■□ 3.53
NUCB1-211ENST00000485798 CCDC180Q9P1Z9 1646 aa33.13■■■□□ 2.89
NUCB1-211ENST00000485798 ABCC9O60706 1549 aa32.21■■■□□ 2.75
NUCB1-211ENST00000485798 RB1CC1Q8TDY2 1594 aa31.11■■■□□ 2.57
NUCB1-211ENST00000485798 NACADO15069 1562 aa31.09■■■□□ 2.57
NUCB1-211ENST00000485798 MYO15BQ96JP2 1530 aa30.96■■■□□ 2.55
NUCB1-211ENST00000485798 ZCCHC6Q5VYS8 1495 aaKnown RBP30.93■■■□□ 2.54
NUCB1-211ENST00000485798 DCAF1Q9Y4B6 1507 aa30.79■■■□□ 2.52
NUCB1-211ENST00000485798 DCAF8L2P0C7V8 631 aa30.73■■■□□ 2.51
NUCB1-211ENST00000485798 UNC13AQ9UPW8 1703 aa30.47■■■□□ 2.47
NUCB1-211ENST00000485798 DNAJC5BQ9UF47 199 aa30.39■■■□□ 2.46
NUCB1-211ENST00000485798 BICRAQ9NZM4 1560 aa30.17■■■□□ 2.42
NUCB1-211ENST00000485798 SCRIBQ14160 1630 aa30.06■■■□□ 2.4
NUCB1-211ENST00000485798 PABPN1Q86U42 306 aaKnown RBP eCLIP30■■■□□ 2.39
NUCB1-211ENST00000485798 SHROOM4Q9ULL8 1493 aa29.96■■■□□ 2.39
NUCB1-211ENST00000485798 EIF4G1Q04637 1599 aaKnown RBP29.36■■■□□ 2.29
NUCB1-211ENST00000485798 CC2D2AQ9P2K1 1620 aa29.23■■■□□ 2.27
NUCB1-211ENST00000485798 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
NUCB1-211ENST00000485798 SMARCA4P51532 1647 aa28.82■■■□□ 2.2
NUCB1-211ENST00000485798 BAZ1AQ9NRL2 1556 aaPredicted RBP28.79■■■□□ 2.2
NUCB1-211ENST00000485798 NCAPD3P42695 1498 aa28.65■■■□□ 2.18
NUCB1-211ENST00000485798 SMARCA2P51531 1590 aa28.64■■■□□ 2.18
NUCB1-211ENST00000485798 ATAD2BQ9ULI0 1458 aa28.62■■■□□ 2.17
NUCB1-211ENST00000485798 PEG3Q9GZU2 1588 aa28.61■■■□□ 2.17
NUCB1-211ENST00000485798 HMGXB3Q12766 1538 aa28.56■■■□□ 2.16
NUCB1-211ENST00000485798 MROH2BQ7Z745 1585 aa28.54■■■□□ 2.16
NUCB1-211ENST00000485798 BAZ1BQ9UIG0 1483 aaKnown RBP28.38■■■□□ 2.13
NUCB1-211ENST00000485798 DNAJC5Q9H3Z4 198 aa28.31■■■□□ 2.12
NUCB1-211ENST00000485798 WIZO95785 1651 aa28.26■■■□□ 2.11
NUCB1-211ENST00000485798 RSF1Q96T23 1441 aaPredicted RBP28.2■■■□□ 2.11
NUCB1-211ENST00000485798 TOP2AP11388 1531 aaKnown RBP28■■■□□ 2.07
NUCB1-211ENST00000485798 LAMC3Q9Y6N6 1575 aa27.94■■■□□ 2.06
NUCB1-211ENST00000485798 NESP48681 1621 aa27.88■■■□□ 2.05
NUCB1-211ENST00000485798 ERCC6Q03468 1493 aa27.78■■■□□ 2.04
NUCB1-211ENST00000485798 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
NUCB1-211ENST00000485798 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
NUCB1-211ENST00000485798 KIF21AQ7Z4S6 1674 aa27.66■■■□□ 2.02
NUCB1-211ENST00000485798 CFTRP13569 1480 aa27.63■■■□□ 2.01
NUCB1-211ENST00000485798 CUX2O14529 1486 aa27.61■■■□□ 2.01
NUCB1-211ENST00000485798 THOC2Q8NI27 1593 aaKnown RBP27.6■■■□□ 2.01
NUCB1-211ENST00000485798 CCDC88BA6NC98 1476 aa27.59■■■□□ 2.01
NUCB1-211ENST00000485798 PRDM2Q13029 1718 aa27.57■■■□□ 2
NUCB1-211ENST00000485798 FANCD2Q9BXW9 1451 aa27.44■■□□□ 1.98
NUCB1-211ENST00000485798 CEP164Q9UPV0 1460 aa27.44■■□□□ 1.98
NUCB1-211ENST00000485798 MRC2Q9UBG0 1479 aa27.4■■□□□ 1.98
NUCB1-211ENST00000485798 WDR62O43379 1518 aa27.36■■□□□ 1.97
NUCB1-211ENST00000485798 SUPT5HO00267 1087 aaKnown RBP27.27■■□□□ 1.96
NUCB1-211ENST00000485798 URB2Q14146 1524 aaKnown RBP27.18■■□□□ 1.94
NUCB1-211ENST00000485798 ABCC8Q09428 1581 aa27.07■■□□□ 1.92
NUCB1-211ENST00000485798 DNMBPQ6XZF7 1577 aa27.03■■□□□ 1.92
NUCB1-211ENST00000485798 TOPBP1Q92547 1522 aa27.02■■□□□ 1.92
NUCB1-211ENST00000485798 IFT140Q96RY7 1462 aa26.87■■□□□ 1.89
NUCB1-211ENST00000485798 TRIM41Q8WV44 630 aa26.81■■□□□ 1.88
NUCB1-211ENST00000485798 CUX1P39880 1505 aa26.8■■□□□ 1.88
NUCB1-211ENST00000485798 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
NUCB1-211ENST00000485798 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
NUCB1-211ENST00000485798 FGD5Q6ZNL6 1462 aa26.7■■□□□ 1.87
NUCB1-211ENST00000485798 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
NUCB1-211ENST00000485798 EIF4G3O43432 1585 aaKnown RBP26.67■■□□□ 1.86
NUCB1-211ENST00000485798 WDR97A6NE52 1622 aa26.66■■□□□ 1.86
NUCB1-211ENST00000485798 BIVM-ERCC5R4GMW8 1640 aa26.65■■□□□ 1.86
NUCB1-211ENST00000485798 SOGA1O94964 1423 aa26.62■■□□□ 1.85
NUCB1-211ENST00000485798 TOP2BQ02880 1626 aa26.61■■□□□ 1.85
NUCB1-211ENST00000485798 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
NUCB1-211ENST00000485798 WRNQ14191 1432 aaPredicted RBP eCLIP26.59■■□□□ 1.85
NUCB1-211ENST00000485798 SYNJ1O43426 1573 aa26.56■■□□□ 1.84
NUCB1-211ENST00000485798 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.831e-6■■■■■ 26.9
NUCB1-211ENST00000485798 ABCA10Q8WWZ4 1543 aa26.49■■□□□ 1.83
NUCB1-211ENST00000485798 TDRD9Q8NDG6 1382 aaKnown RBP26.43■■□□□ 1.82
NUCB1-211ENST00000485798 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
NUCB1-211ENST00000485798 PBRM1Q86U86 1689 aa26.39■■□□□ 1.82
NUCB1-211ENST00000485798 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
NUCB1-211ENST00000485798 CHD1O14646 1710 aa26.36■■□□□ 1.81
NUCB1-211ENST00000485798 GAPVD1Q14C86 1478 aa26.35■■□□□ 1.81
NUCB1-211ENST00000485798 MAGI1Q96QZ7 1491 aaPredicted RBP26.34■■□□□ 1.81
NUCB1-211ENST00000485798 OSCARQ8IYS5 282 aa26.32■■□□□ 1.8
NUCB1-211ENST00000485798 SNAPC4Q5SXM2 1469 aa26.31■■□□□ 1.8
NUCB1-211ENST00000485798 SYNJ2O15056 1496 aa26.22■■□□□ 1.79
NUCB1-211ENST00000485798 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
NUCB1-211ENST00000485798 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
NUCB1-211ENST00000485798 FBLN2P98095 1184 aa26.09■■□□□ 1.77
NUCB1-211ENST00000485798 CHMP7Q8WUX9 453 aaPredicted RBP26.08■■□□□ 1.77
NUCB1-211ENST00000485798 CLASP1Q7Z460 1538 aa26.08■■□□□ 1.77
NUCB1-211ENST00000485798 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
NUCB1-211ENST00000485798 KIF27Q86VH2 1401 aa26.04■■□□□ 1.76
NUCB1-211ENST00000485798 GRIN2AQ12879 1464 aa26.04■■□□□ 1.76
NUCB1-211ENST00000485798 RIMBP3CA6NJZ7 1639 aa26.01■■□□□ 1.75
NUCB1-211ENST00000485798 RIMBP3BA6NNM3 1639 aa26.01■■□□□ 1.75
NUCB1-211ENST00000485798 RIMBP3Q9UFD9 1639 aa26.01■■□□□ 1.75
NUCB1-211ENST00000485798 ARHGEF11O15085 1522 aa25.98■■□□□ 1.75
NUCB1-211ENST00000485798 CUL7Q14999 1698 aa25.98■■□□□ 1.75
NUCB1-211ENST00000485798 NUP160Q12769 1436 aa25.94■■□□□ 1.74
NUCB1-211ENST00000485798 CEP170Q5SW79 1584 aa25.91■■□□□ 1.74
NUCB1-211ENST00000485798 IGF1RP08069 1367 aa25.91■■□□□ 1.74
NUCB1-211ENST00000485798 SHROOM2Q13796 1616 aa25.81■■□□□ 1.72
NUCB1-211ENST00000485798 RUSC2Q8N2Y8 1516 aa25.78■■□□□ 1.72
NUCB1-211ENST00000485798 ARAP1Q96P48 1450 aa25.76■■□□□ 1.71
NUCB1-211ENST00000485798 CARMIL1Q5VZK9 1371 aa25.75■■□□□ 1.71
NUCB1-211ENST00000485798 CYB5RLQ6IPT4 315 aa25.73■■□□□ 1.71
NUCB1-211ENST00000485798 KIAA0586Q9BVV6 1533 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms