RNA–Protein interactions for RNA: ENST00000485523.5

KCNMB3-205, Transcript of potassium calcium-activated channel subfamily M regulatory beta subunit 3, humanhuman

TSL 1 (best) BASIC

Gene KCNMB3, Length 7,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3-205ENST00000485523 NISCHQ9Y2I1 1504 aa16.72■□□□□ 0.27
KCNMB3-205ENST00000485523 DCAF8L2P0C7V8 631 aa15.48■□□□□ 0.07
KCNMB3-205ENST00000485523 SUPT5HO00267 1087 aaKnown RBP14.36□□□□□ -0.11
KCNMB3-205ENST00000485523 SHROOM4Q9ULL8 1493 aa14.33□□□□□ -0.12
KCNMB3-205ENST00000485523 CCDC180Q9P1Z9 1646 aa14.27□□□□□ -0.13
KCNMB3-205ENST00000485523 ABCC9O60706 1549 aa14.17□□□□□ -0.14
KCNMB3-205ENST00000485523 FAM9AQ8IZU1 332 aaPredicted RBP14.07□□□□□ -0.16
KCNMB3-205ENST00000485523 ZCCHC6Q5VYS8 1495 aaKnown RBP13.89□□□□□ -0.19
KCNMB3-205ENST00000485523 NACADO15069 1562 aa13.79□□□□□ -0.2
KCNMB3-205ENST00000485523 DCAF1Q9Y4B6 1507 aa13.78□□□□□ -0.2
KCNMB3-205ENST00000485523 RB1CC1Q8TDY2 1594 aa13.78□□□□□ -0.2
KCNMB3-205ENST00000485523 APLP2Q06481 763 aa13.72□□□□□ -0.21
KCNMB3-205ENST00000485523 TRIM41Q8WV44 630 aa13.68□□□□□ -0.22
KCNMB3-205ENST00000485523 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
KCNMB3-205ENST00000485523 PABPN1Q86U42 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
KCNMB3-205ENST00000485523 SCRIBQ14160 1630 aa13.49□□□□□ -0.25
KCNMB3-205ENST00000485523 UBTFP17480 764 aaKnown RBP13.35□□□□□ -0.27
KCNMB3-205ENST00000485523 BAZ1AQ9NRL2 1556 aaPredicted RBP13.21□□□□□ -0.29
KCNMB3-205ENST00000485523 CHIC1Q5VXU3 224 aa13.2□□□□□ -0.3
KCNMB3-205ENST00000485523 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
KCNMB3-205ENST00000485523 BAZ1BQ9UIG0 1483 aaKnown RBP13.09□□□□□ -0.31
KCNMB3-205ENST00000485523 RSF1Q96T23 1441 aaPredicted RBP13.07□□□□□ -0.32
KCNMB3-205ENST00000485523 ATP1B4Q9UN42 357 aaPredicted RBP13.04□□□□□ -0.32
KCNMB3-205ENST00000485523 SMARCA2P51531 1590 aa13.04□□□□□ -0.32
KCNMB3-205ENST00000485523 EEA1Q15075 1411 aa13□□□□□ -0.33
KCNMB3-205ENST00000485523 ZEB1P37275 1124 aaPredicted RBP13□□□□□ -0.33
KCNMB3-205ENST00000485523 CSRNP3Q8WYN3 585 aa12.99□□□□□ -0.33
KCNMB3-205ENST00000485523 RANGAP1P46060 587 aaPredicted RBP12.94□□□□□ -0.34
KCNMB3-205ENST00000485523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.93□□□□□ -0.34
KCNMB3-205ENST00000485523 HNRNPUL2Q1KMD3 747 aaKnown RBP12.93□□□□□ -0.34
KCNMB3-205ENST00000485523 CDK11AQ9UQ88 783 aaPredicted RBP12.91□□□□□ -0.34
KCNMB3-205ENST00000485523 PDS5BQ9NTI5 1447 aa12.88□□□□□ -0.35
KCNMB3-205ENST00000485523 CECR2Q9BXF3 1484 aa12.81□□□□□ -0.36
KCNMB3-205ENST00000485523 FBLN2P98095 1184 aa12.81□□□□□ -0.36
KCNMB3-205ENST00000485523 WRNQ14191 1432 aaPredicted RBP eCLIP12.81□□□□□ -0.36
KCNMB3-205ENST00000485523 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.37
KCNMB3-205ENST00000485523 ERCC6Q03468 1493 aa12.77□□□□□ -0.37
KCNMB3-205ENST00000485523 KIF27Q86VH2 1401 aa12.76□□□□□ -0.37
KCNMB3-205ENST00000485523 TRIM26Q12899 539 aaPredicted RBP12.76□□□□□ -0.37
KCNMB3-205ENST00000485523 ATAD2BQ9ULI0 1458 aa12.76□□□□□ -0.37
KCNMB3-205ENST00000485523 ACIN1Q9UKV3 1341 aaKnown RBP12.75□□□□□ -0.37
KCNMB3-205ENST00000485523 CADPSQ9ULU8 1353 aa12.75□□□□□ -0.37
KCNMB3-205ENST00000485523 NCAPD3P42695 1498 aa12.74□□□□□ -0.37
KCNMB3-205ENST00000485523 CHMP7Q8WUX9 453 aaPredicted RBP12.73□□□□□ -0.37
KCNMB3-205ENST00000485523 ABCC8Q09428 1581 aa12.72□□□□□ -0.37
KCNMB3-205ENST00000485523 MYT1LQ9UL68 1186 aa12.71□□□□□ -0.37
KCNMB3-205ENST00000485523 MROH2BQ7Z745 1585 aa12.7□□□□□ -0.38
KCNMB3-205ENST00000485523 TOP2AP11388 1531 aaKnown RBP12.7□□□□□ -0.38
KCNMB3-205ENST00000485523 CCER1Q8TC90 406 aaPredicted RBP12.69□□□□□ -0.38
KCNMB3-205ENST00000485523 PCGF6Q9BYE7 350 aa12.68□□□□□ -0.38
KCNMB3-205ENST00000485523 SMARCA4P51532 1647 aa12.64□□□□□ -0.39
KCNMB3-205ENST00000485523 TTBK1Q5TCY1 1321 aaPredicted RBP12.62□□□□□ -0.39
KCNMB3-205ENST00000485523 LOC105371045A0A1W2PR82 267 aa12.61□□□□□ -0.39
KCNMB3-205ENST00000485523 CEP164Q9UPV0 1460 aa12.6□□□□□ -0.39
KCNMB3-205ENST00000485523 CCDC88BA6NC98 1476 aa12.58□□□□□ -0.4
KCNMB3-205ENST00000485523 GOLGA3Q08378 1498 aa12.58□□□□□ -0.4
KCNMB3-205ENST00000485523 EIF4G1Q04637 1599 aaKnown RBP12.55□□□□□ -0.4
KCNMB3-205ENST00000485523 PELP1Q8IZL8 1130 aaKnown RBP12.54□□□□□ -0.4
KCNMB3-205ENST00000485523 HMGXB3Q12766 1538 aa12.54□□□□□ -0.4
KCNMB3-205ENST00000485523 TNIKQ9UKE5 1360 aa12.5□□□□□ -0.41
KCNMB3-205ENST00000485523 CLIP1P30622 1438 aa12.49□□□□□ -0.41
KCNMB3-205ENST00000485523 FAM50AQ14320 339 aaKnown RBP12.48□□□□□ -0.41
KCNMB3-205ENST00000485523 CARMIL1Q5VZK9 1371 aa12.48□□□□□ -0.41
KCNMB3-205ENST00000485523 SOGA1O94964 1423 aa12.47□□□□□ -0.41
KCNMB3-205ENST00000485523 CUX2O14529 1486 aa12.47□□□□□ -0.41
KCNMB3-205ENST00000485523 FHAD1B1AJZ9 1412 aa12.47□□□□□ -0.41
KCNMB3-205ENST00000485523 PLEKHD1A6NEE1 506 aa12.46□□□□□ -0.41
KCNMB3-205ENST00000485523 CARMIL2Q6F5E8 1435 aa12.46□□□□□ -0.41
KCNMB3-205ENST00000485523 ITGAEP38570 1179 aa12.44□□□□□ -0.42
KCNMB3-205ENST00000485523 MTUS2Q5JR59 1369 aa12.44□□□□□ -0.42
KCNMB3-205ENST00000485523 FANCD2Q9BXW9 1451 aa12.43□□□□□ -0.42
KCNMB3-205ENST00000485523 TSPY4P0CV99 314 aa12.42□□□□□ -0.42
KCNMB3-205ENST00000485523 TSPY10P0CW01 314 aa12.42□□□□□ -0.42
KCNMB3-205ENST00000485523 ESF1Q9H501 851 aaKnown RBP12.41□□□□□ -0.42
KCNMB3-205ENST00000485523 P3H3Q8IVL6 736 aa12.4□□□□□ -0.42
KCNMB3-205ENST00000485523 CFTRP13569 1480 aa12.37□□□□□ -0.43
KCNMB3-205ENST00000485523 TRIM52Q96A61 297 aa12.37□□□□□ -0.43
KCNMB3-205ENST00000485523 WIZO95785 1651 aa12.34□□□□□ -0.43
KCNMB3-205ENST00000485523 BICRAQ9NZM4 1560 aa12.33□□□□□ -0.44
KCNMB3-205ENST00000485523 FMN1Q68DA7 1419 aa12.32□□□□□ -0.44
KCNMB3-205ENST00000485523 CEP162Q5TB80 1403 aa12.3□□□□□ -0.44
KCNMB3-205ENST00000485523 CENPBP07199 599 aaPredicted RBP12.29□□□□□ -0.44
KCNMB3-205ENST00000485523 PPARGC1BQ86YN6 1023 aaKnown RBP12.29□□□□□ -0.44
KCNMB3-205ENST00000485523 TDRD9Q8NDG6 1382 aaKnown RBP12.29□□□□□ -0.44
KCNMB3-205ENST00000485523 RAPGEF2Q9Y4G8 1499 aa12.29□□□□□ -0.44
KCNMB3-205ENST00000485523 PEG3Q9GZU2 1588 aa12.29□□□□□ -0.44
KCNMB3-205ENST00000485523 ZNF777Q9ULD5 760 aaPredicted RBP12.28□□□□□ -0.44
KCNMB3-205ENST00000485523 CC2D2AQ9P2K1 1620 aa12.26□□□□□ -0.45
KCNMB3-205ENST00000485523 MRC2Q9UBG0 1479 aa12.24□□□□□ -0.45
KCNMB3-205ENST00000485523 OSCARQ8IYS5 282 aa12.23□□□□□ -0.45
KCNMB3-205ENST00000485523 IFT140Q96RY7 1462 aa12.23□□□□□ -0.45
KCNMB3-205ENST00000485523 RSPH4AQ5TD94 716 aa12.22□□□□□ -0.45
KCNMB3-205ENST00000485523 LAMC3Q9Y6N6 1575 aa12.22□□□□□ -0.45
KCNMB3-205ENST00000485523 CFDP1Q9UEE9 299 aaPredicted RBP12.22□□□□□ -0.45
KCNMB3-205ENST00000485523 GAPVD1Q14C86 1478 aa12.19□□□□□ -0.46
KCNMB3-205ENST00000485523 GRIN2BQ13224 1484 aa12.18□□□□□ -0.46
KCNMB3-205ENST00000485523 VPS8Q8N3P4 1428 aa12.18□□□□□ -0.46
KCNMB3-205ENST00000485523 JPH4Q96JJ6 628 aa12.17□□□□□ -0.46
KCNMB3-205ENST00000485523 CCNB3Q8WWL7 1395 aa12.17□□□□□ -0.46
KCNMB3-205ENST00000485523 FGD5Q6ZNL6 1462 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms