RNA–Protein interactions for RNA: ENST00000485515.5

SDHB-207, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-207ENST00000485515 NISCHQ9Y2I1 1504 aa30.46■■■□□ 2.47
SDHB-207ENST00000485515 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
SDHB-207ENST00000485515 ABCC9O60706 1549 aa26.57■■□□□ 1.84
SDHB-207ENST00000485515 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
SDHB-207ENST00000485515 RB1CC1Q8TDY2 1594 aa25.57■■□□□ 1.68
SDHB-207ENST00000485515 NACADO15069 1562 aa25.52■■□□□ 1.68
SDHB-207ENST00000485515 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
SDHB-207ENST00000485515 MYO15BQ96JP2 1530 aa25.34■■□□□ 1.65
SDHB-207ENST00000485515 DCAF1Q9Y4B6 1507 aa25.21■■□□□ 1.63
SDHB-207ENST00000485515 UNC13AQ9UPW8 1703 aa24.86■■□□□ 1.57
SDHB-207ENST00000485515 PABPN1Q86U42 306 aaKnown RBP eCLIP24.85■■□□□ 1.57
SDHB-207ENST00000485515 SCRIBQ14160 1630 aa24.72■■□□□ 1.55
SDHB-207ENST00000485515 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
SDHB-207ENST00000485515 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
SDHB-207ENST00000485515 DNAJC5BQ9UF47 199 aa24.36■■□□□ 1.49
SDHB-207ENST00000485515 EIF4G1Q04637 1599 aaKnown RBP24.1■■□□□ 1.45
SDHB-207ENST00000485515 CC2D2AQ9P2K1 1620 aa24.01■■□□□ 1.43
SDHB-207ENST00000485515 CECR2Q9BXF3 1484 aa23.89■■□□□ 1.42
SDHB-207ENST00000485515 BAZ1AQ9NRL2 1556 aaPredicted RBP23.65■■□□□ 1.38
SDHB-207ENST00000485515 SMARCA4P51532 1647 aa23.62■■□□□ 1.37
SDHB-207ENST00000485515 SMARCA2P51531 1590 aa23.54■■□□□ 1.36
SDHB-207ENST00000485515 NCAPD3P42695 1498 aa23.54■■□□□ 1.36
SDHB-207ENST00000485515 ATAD2BQ9ULI0 1458 aa23.53■■□□□ 1.36
SDHB-207ENST00000485515 MROH2BQ7Z745 1585 aa23.44■■□□□ 1.34
SDHB-207ENST00000485515 HMGXB3Q12766 1538 aa23.4■■□□□ 1.34
SDHB-207ENST00000485515 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
SDHB-207ENST00000485515 BAZ1BQ9UIG0 1483 aaKnown RBP23.38■■□□□ 1.33
SDHB-207ENST00000485515 WIZO95785 1651 aa23.19■■□□□ 1.3
SDHB-207ENST00000485515 RSF1Q96T23 1441 aaPredicted RBP23.19■■□□□ 1.3
SDHB-207ENST00000485515 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
SDHB-207ENST00000485515 TOP2AP11388 1531 aaKnown RBP22.98■■□□□ 1.27
SDHB-207ENST00000485515 NESP48681 1621 aa22.93■■□□□ 1.26
SDHB-207ENST00000485515 LAMC3Q9Y6N6 1575 aa22.93■■□□□ 1.26
SDHB-207ENST00000485515 CADPSQ9ULU8 1353 aa22.89■■□□□ 1.25
SDHB-207ENST00000485515 PDS5BQ9NTI5 1447 aa22.84■■□□□ 1.25
SDHB-207ENST00000485515 CCDC88BA6NC98 1476 aa22.71■■□□□ 1.23
SDHB-207ENST00000485515 CUX2O14529 1486 aa22.71■■□□□ 1.23
SDHB-207ENST00000485515 CFTRP13569 1480 aa22.7■■□□□ 1.22
SDHB-207ENST00000485515 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
SDHB-207ENST00000485515 KIF21AQ7Z4S6 1674 aa22.65■■□□□ 1.22
SDHB-207ENST00000485515 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
SDHB-207ENST00000485515 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
SDHB-207ENST00000485515 THOC2Q8NI27 1593 aaKnown RBP22.57■■□□□ 1.2
SDHB-207ENST00000485515 MRC2Q9UBG0 1479 aa22.55■■□□□ 1.2
SDHB-207ENST00000485515 PRDM2Q13029 1718 aa22.48■■□□□ 1.19
SDHB-207ENST00000485515 WDR62O43379 1518 aa22.44■■□□□ 1.18
SDHB-207ENST00000485515 URB2Q14146 1524 aaKnown RBP22.32■■□□□ 1.16
SDHB-207ENST00000485515 ABCC8Q09428 1581 aa22.29■■□□□ 1.16
SDHB-207ENST00000485515 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
SDHB-207ENST00000485515 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
SDHB-207ENST00000485515 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
SDHB-207ENST00000485515 DNAJC5Q9H3Z4 198 aa22.07■■□□□ 1.12
SDHB-207ENST00000485515 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
SDHB-207ENST00000485515 CUX1P39880 1505 aa22■■□□□ 1.11
SDHB-207ENST00000485515 SOGA1O94964 1423 aa21.99■■□□□ 1.11
SDHB-207ENST00000485515 FGD5Q6ZNL6 1462 aa21.97■■□□□ 1.11
SDHB-207ENST00000485515 ZNF608Q9ULD9 1512 aaPredicted RBP21.96■■□□□ 1.11
SDHB-207ENST00000485515 TARBP1Q13395 1621 aaKnown RBP21.92■■□□□ 1.1
SDHB-207ENST00000485515 RAD54L2Q9Y4B4 1467 aa21.92■■□□□ 1.1
SDHB-207ENST00000485515 WRNQ14191 1432 aaPredicted RBP eCLIP21.92■■□□□ 1.1
SDHB-207ENST00000485515 EIF4G3O43432 1585 aaKnown RBP21.87■■□□□ 1.09
SDHB-207ENST00000485515 AQRO60306 1485 aaKnown RBP eCLIP21.87■■□□□ 1.094e-7■■■■■ 34.2
SDHB-207ENST00000485515 TDRD9Q8NDG6 1382 aaKnown RBP21.85■■□□□ 1.09
SDHB-207ENST00000485515 OSCARQ8IYS5 282 aa21.84■■□□□ 1.09
SDHB-207ENST00000485515 WDR97A6NE52 1622 aa21.83■■□□□ 1.08
SDHB-207ENST00000485515 TOP2BQ02880 1626 aa21.83■■□□□ 1.08
SDHB-207ENST00000485515 BIVM-ERCC5R4GMW8 1640 aa21.8■■□□□ 1.08
SDHB-207ENST00000485515 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
SDHB-207ENST00000485515 ABCA10Q8WWZ4 1543 aa21.76■■□□□ 1.07
SDHB-207ENST00000485515 FBLN2P98095 1184 aa21.74■■□□□ 1.07
SDHB-207ENST00000485515 GRIN2BQ13224 1484 aa21.72■■□□□ 1.07
SDHB-207ENST00000485515 GAPVD1Q14C86 1478 aa21.72■■□□□ 1.07
SDHB-207ENST00000485515 MAGI1Q96QZ7 1491 aaPredicted RBP21.67■■□□□ 1.06
SDHB-207ENST00000485515 CHMP7Q8WUX9 453 aaPredicted RBP21.67■■□□□ 1.06
SDHB-207ENST00000485515 SNAPC4Q5SXM2 1469 aa21.66■■□□□ 1.06
SDHB-207ENST00000485515 ABCA5Q8WWZ7 1642 aa21.63■■□□□ 1.05
SDHB-207ENST00000485515 PBRM1Q86U86 1689 aa21.6■■□□□ 1.05
SDHB-207ENST00000485515 CHD1O14646 1710 aa21.59■■□□□ 1.05
SDHB-207ENST00000485515 SYNJ2O15056 1496 aa21.58■■□□□ 1.04
SDHB-207ENST00000485515 ERICH3Q5RHP9 1530 aa21.51■■□□□ 1.03
SDHB-207ENST00000485515 KIF27Q86VH2 1401 aa21.5■■□□□ 1.03
SDHB-207ENST00000485515 FHAD1B1AJZ9 1412 aa21.47■■□□□ 1.03
SDHB-207ENST00000485515 TRIM41Q8WV44 630 aa21.47■■□□□ 1.03
SDHB-207ENST00000485515 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
SDHB-207ENST00000485515 GRIN2AQ12879 1464 aa21.42■■□□□ 1.02
SDHB-207ENST00000485515 ARHGEF11O15085 1522 aa21.37■■□□□ 1.01
SDHB-207ENST00000485515 IGF1RP08069 1367 aa21.36■■□□□ 1.01
SDHB-207ENST00000485515 RIMBP3CA6NJZ7 1639 aa21.36■■□□□ 1.01
SDHB-207ENST00000485515 RIMBP3BA6NNM3 1639 aa21.36■■□□□ 1.01
SDHB-207ENST00000485515 RIMBP3Q9UFD9 1639 aa21.36■■□□□ 1.01
SDHB-207ENST00000485515 CLASP1Q7Z460 1538 aa21.35■■□□□ 1.01
SDHB-207ENST00000485515 CUL7Q14999 1698 aa21.31■■□□□ 1
SDHB-207ENST00000485515 NUP160Q12769 1436 aa21.3■■□□□ 1
SDHB-207ENST00000485515 CARMIL1Q5VZK9 1371 aa21.28■■□□□ 1
SDHB-207ENST00000485515 CYB5RLQ6IPT4 315 aa21.27■■□□□ 1
SDHB-207ENST00000485515 CEP170Q5SW79 1584 aa21.27■□□□□ 0.99
SDHB-207ENST00000485515 JPH4Q96JJ6 628 aa21.18■□□□□ 0.98
SDHB-207ENST00000485515 RUSC2Q8N2Y8 1516 aa21.18■□□□□ 0.98
SDHB-207ENST00000485515 ARAP1Q96P48 1450 aa21.17■□□□□ 0.98
SDHB-207ENST00000485515 RAPGEF2Q9Y4G8 1499 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms