RNA–Protein interactions for RNA: ENST00000485252.6

RAP1B-211, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 5

Gene RAP1B, Length 312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-211ENST00000485252 NISCHQ9Y2I1 1504 aa41.9■■■■■ 4.3
RAP1B-211ENST00000485252 ABCC9O60706 1549 aa39.23■■■■□ 3.87
RAP1B-211ENST00000485252 CCDC180Q9P1Z9 1646 aa38.11■■■■□ 3.69
RAP1B-211ENST00000485252 DNAJC5BQ9UF47 199 aa37.75■■■■□ 3.63
RAP1B-211ENST00000485252 RB1CC1Q8TDY2 1594 aa36.81■■■■□ 3.48
RAP1B-211ENST00000485252 PABPN1Q86U42 306 aaKnown RBP eCLIP36.35■■■■□ 3.41
RAP1B-211ENST00000485252 NACADO15069 1562 aa36.25■■■■□ 3.39
RAP1B-211ENST00000485252 UNC13AQ9UPW8 1703 aa36.11■■■■□ 3.37
RAP1B-211ENST00000485252 DCAF8L2P0C7V8 631 aa35.96■■■■□ 3.35
RAP1B-211ENST00000485252 BICRAQ9NZM4 1560 aa35.79■■■■□ 3.32
RAP1B-211ENST00000485252 DNAJC5Q9H3Z4 198 aa35.42■■■■□ 3.26
RAP1B-211ENST00000485252 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
RAP1B-211ENST00000485252 CC2D2AQ9P2K1 1620 aa35.38■■■■□ 3.25
RAP1B-211ENST00000485252 MYO15BQ96JP2 1530 aa35.31■■■■□ 3.24
RAP1B-211ENST00000485252 SHROOM4Q9ULL8 1493 aa35.06■■■■□ 3.2
RAP1B-211ENST00000485252 EIF4G1Q04637 1599 aaKnown RBP35■■■■□ 3.19
RAP1B-211ENST00000485252 SCRIBQ14160 1630 aa34.73■■■■□ 3.15
RAP1B-211ENST00000485252 ZCCHC6Q5VYS8 1495 aaKnown RBP34.47■■■■□ 3.11
RAP1B-211ENST00000485252 DCAF1Q9Y4B6 1507 aa34.47■■■■□ 3.11
RAP1B-211ENST00000485252 CUX2O14529 1486 aa34.18■■■■□ 3.06
RAP1B-211ENST00000485252 ERCC6Q03468 1493 aa33.93■■■■□ 3.02
RAP1B-211ENST00000485252 TRIM41Q8WV44 630 aa33.53■■■□□ 2.96
RAP1B-211ENST00000485252 NCAPD3P42695 1498 aa33.45■■■□□ 2.95
RAP1B-211ENST00000485252 NESP48681 1621 aa33.39■■■□□ 2.94
RAP1B-211ENST00000485252 THOC2Q8NI27 1593 aaKnown RBP33.26■■■□□ 2.91
RAP1B-211ENST00000485252 ATAD2BQ9ULI0 1458 aa33.23■■■□□ 2.91
RAP1B-211ENST00000485252 HMGXB3Q12766 1538 aa33.12■■■□□ 2.89
RAP1B-211ENST00000485252 SMARCA2P51531 1590 aa33.08■■■□□ 2.89
RAP1B-211ENST00000485252 KIF21AQ7Z4S6 1674 aa32.97■■■□□ 2.87
RAP1B-211ENST00000485252 SMARCA4P51532 1647 aa32.97■■■□□ 2.87
RAP1B-211ENST00000485252 LAMC3Q9Y6N6 1575 aa32.92■■■□□ 2.86
RAP1B-211ENST00000485252 BAZ1BQ9UIG0 1483 aaKnown RBP32.87■■■□□ 2.85
RAP1B-211ENST00000485252 PDS5BQ9NTI5 1447 aa32.75■■■□□ 2.83
RAP1B-211ENST00000485252 BAZ1AQ9NRL2 1556 aaPredicted RBP32.64■■■□□ 2.82
RAP1B-211ENST00000485252 PEG3Q9GZU2 1588 aa32.58■■■□□ 2.81
RAP1B-211ENST00000485252 MRC2Q9UBG0 1479 aa32.55■■■□□ 2.8
RAP1B-211ENST00000485252 WDR62O43379 1518 aa32.51■■■□□ 2.79
RAP1B-211ENST00000485252 OSCARQ8IYS5 282 aa32.45■■■□□ 2.79
RAP1B-211ENST00000485252 CADPSQ9ULU8 1353 aa32.4■■■□□ 2.78
RAP1B-211ENST00000485252 MROH2BQ7Z745 1585 aa32.32■■■□□ 2.76
RAP1B-211ENST00000485252 RIMBP3CA6NJZ7 1639 aa32.23■■■□□ 2.75
RAP1B-211ENST00000485252 RIMBP3BA6NNM3 1639 aa32.23■■■□□ 2.75
RAP1B-211ENST00000485252 RIMBP3Q9UFD9 1639 aa32.23■■■□□ 2.75
RAP1B-211ENST00000485252 CEP164Q9UPV0 1460 aa32.22■■■□□ 2.75
RAP1B-211ENST00000485252 FANCD2Q9BXW9 1451 aa32.08■■■□□ 2.73
RAP1B-211ENST00000485252 ARHGEF11O15085 1522 aa31.97■■■□□ 2.71
RAP1B-211ENST00000485252 WIZO95785 1651 aa31.94■■■□□ 2.7
RAP1B-211ENST00000485252 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
RAP1B-211ENST00000485252 TRHP20396 242 aaPredicted RBP31.86■■■□□ 2.69
RAP1B-211ENST00000485252 CYB5RLQ6IPT4 315 aa31.82■■■□□ 2.68
RAP1B-211ENST00000485252 CFTRP13569 1480 aa31.79■■■□□ 2.68
RAP1B-211ENST00000485252 AEBP2Q6ZN18 517 aaPredicted RBP31.74■■■□□ 2.67
RAP1B-211ENST00000485252 ZNF608Q9ULD9 1512 aaPredicted RBP31.7■■■□□ 2.66
RAP1B-211ENST00000485252 ARAP1Q96P48 1450 aa31.58■■■□□ 2.65
RAP1B-211ENST00000485252 IFT140Q96RY7 1462 aa31.58■■■□□ 2.65
RAP1B-211ENST00000485252 CHD1O14646 1710 aa31.53■■■□□ 2.64
RAP1B-211ENST00000485252 PRDM2Q13029 1718 aa31.53■■■□□ 2.64
RAP1B-211ENST00000485252 EIF4G3O43432 1585 aaKnown RBP31.48■■■□□ 2.63
RAP1B-211ENST00000485252 TOP2AP11388 1531 aaKnown RBP31.37■■■□□ 2.61
RAP1B-211ENST00000485252 TOPBP1Q92547 1522 aa31.35■■■□□ 2.61
RAP1B-211ENST00000485252 RSF1Q96T23 1441 aaPredicted RBP31.33■■■□□ 2.61
RAP1B-211ENST00000485252 FBLN2P98095 1184 aa31.33■■■□□ 2.61
RAP1B-211ENST00000485252 AQRO60306 1485 aaKnown RBP eCLIP31.27■■■□□ 2.61e-6■■■■□ 26.1
RAP1B-211ENST00000485252 TARBP1Q13395 1621 aaKnown RBP31.17■■■□□ 2.58
RAP1B-211ENST00000485252 ABCC8Q09428 1581 aa31.15■■■□□ 2.58
RAP1B-211ENST00000485252 DNMBPQ6XZF7 1577 aa31.14■■■□□ 2.58
RAP1B-211ENST00000485252 CCDC88BA6NC98 1476 aa31.04■■■□□ 2.56
RAP1B-211ENST00000485252 CLASP1Q7Z460 1538 aa31.03■■■□□ 2.56
RAP1B-211ENST00000485252 POLA1P09884 1462 aaPredicted RBP30.95■■■□□ 2.55
RAP1B-211ENST00000485252 SYNJ1O43426 1573 aa30.92■■■□□ 2.54
RAP1B-211ENST00000485252 SNAPC4Q5SXM2 1469 aa30.91■■■□□ 2.54
RAP1B-211ENST00000485252 RAD54L2Q9Y4B4 1467 aa30.9■■■□□ 2.54
RAP1B-211ENST00000485252 TDRD9Q8NDG6 1382 aaKnown RBP30.9■■■□□ 2.54
RAP1B-211ENST00000485252 CHMP7Q8WUX9 453 aaPredicted RBP30.86■■■□□ 2.53
RAP1B-211ENST00000485252 SOGA1O94964 1423 aa30.8■■■□□ 2.52
RAP1B-211ENST00000485252 GAPVD1Q14C86 1478 aa30.79■■■□□ 2.52
RAP1B-211ENST00000485252 MAGI1Q96QZ7 1491 aaPredicted RBP30.74■■■□□ 2.51
RAP1B-211ENST00000485252 WDR97A6NE52 1622 aa30.71■■■□□ 2.51
RAP1B-211ENST00000485252 SYNJ2O15056 1496 aa30.66■■■□□ 2.5
RAP1B-211ENST00000485252 GRIN2BQ13224 1484 aa30.63■■■□□ 2.49
RAP1B-211ENST00000485252 FGD5Q6ZNL6 1462 aa30.63■■■□□ 2.49
RAP1B-211ENST00000485252 PBRM1Q86U86 1689 aa30.55■■■□□ 2.48
RAP1B-211ENST00000485252 ERCC6L2Q5T890 1561 aa30.53■■■□□ 2.48
RAP1B-211ENST00000485252 KIF13AQ9H1H9 1805 aa30.52■■■□□ 2.48
RAP1B-211ENST00000485252 ILDR1Q86SU0 546 aaPredicted RBP30.49■■■□□ 2.47
RAP1B-211ENST00000485252 CUX1P39880 1505 aa30.42■■■□□ 2.46
RAP1B-211ENST00000485252 CEP170Q5SW79 1584 aa30.34■■■□□ 2.45
RAP1B-211ENST00000485252 ABCA5Q8WWZ7 1642 aa30.26■■■□□ 2.44
RAP1B-211ENST00000485252 GRIN2AQ12879 1464 aa30.25■■■□□ 2.43
RAP1B-211ENST00000485252 KDM4FA0A1W2PPD8 638 aa30.24■■■□□ 2.43
RAP1B-211ENST00000485252 SHROOM2Q13796 1616 aa30.2■■■□□ 2.43
RAP1B-211ENST00000485252 ABCA10Q8WWZ4 1543 aa30.17■■■□□ 2.42
RAP1B-211ENST00000485252 NUP160Q12769 1436 aa30.16■■■□□ 2.42
RAP1B-211ENST00000485252 FAM69CQ0P6D2 419 aa30.15■■■□□ 2.42
RAP1B-211ENST00000485252 ADAMTS12P58397 1594 aa30.13■■■□□ 2.41
RAP1B-211ENST00000485252 KDM6BO15054 1643 aa30.09■■■□□ 2.41
RAP1B-211ENST00000485252 ABCC10Q5T3U5 1492 aa30.08■■■□□ 2.41
RAP1B-211ENST00000485252 TSPOAP1O95153 1857 aa30.04■■■□□ 2.4
RAP1B-211ENST00000485252 DIP2BQ9P265 1576 aa30.03■■■□□ 2.4
RAP1B-211ENST00000485252 PRG4Q92954 1404 aaPredicted RBP30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms