RNA–Protein interactions for RNA: ENST00000485037.5

EWSR1-219, Transcript of EWS RNA binding protein 1, humanhuman

TSL 5

Gene EWSR1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-219ENST00000485037 AEBP2Q6ZN18 517 aaPredicted RBP26.78■■□□□ 1.88
EWSR1-219ENST00000485037 CHIC1Q5VXU3 224 aa25.42■■□□□ 1.66
EWSR1-219ENST00000485037 SENP3Q9H4L4 574 aaPredicted RBP22.93■■□□□ 1.26
EWSR1-219ENST00000485037 PHF23Q9BUL5 403 aaPredicted RBP22.61■■□□□ 1.21
EWSR1-219ENST00000485037 FOXD1Q16676 465 aa21.33■■□□□ 1.01
EWSR1-219ENST00000485037 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
EWSR1-219ENST00000485037 MSH5O43196 834 aa20.06■□□□□ 0.8
EWSR1-219ENST00000485037 PIAS4Q8N2W9 510 aaPredicted RBP19.92■□□□□ 0.78
EWSR1-219ENST00000485037 PPP6R1Q9UPN7 881 aa19.87■□□□□ 0.77
EWSR1-219ENST00000485037 ADRA2BP18089 450 aa19.8■□□□□ 0.76
EWSR1-219ENST00000485037 POTEDQ86YR6 584 aa19.64■□□□□ 0.73
EWSR1-219ENST00000485037 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
EWSR1-219ENST00000485037 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
EWSR1-219ENST00000485037 DMRT2Q9Y5R5 561 aa18.16■□□□□ 0.5
EWSR1-219ENST00000485037 PPP4R3CPQ6ZMV5 832 aa17.76■□□□□ 0.43
EWSR1-219ENST00000485037 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
EWSR1-219ENST00000485037 CNKSR2Q8WXI2 1034 aa17.47■□□□□ 0.39
EWSR1-219ENST00000485037 DCAF8L1A6NGE4 600 aa17.38■□□□□ 0.37
EWSR1-219ENST00000485037 RNF216Q9NWF9 866 aaPredicted RBP17.34■□□□□ 0.37
EWSR1-219ENST00000485037 CACNB1Q02641 598 aaPredicted RBP17.22■□□□□ 0.35
EWSR1-219ENST00000485037 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
EWSR1-219ENST00000485037 RNF39Q9H2S5 420 aa17.07■□□□□ 0.32
EWSR1-219ENST00000485037 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
EWSR1-219ENST00000485037 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
EWSR1-219ENST00000485037 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
EWSR1-219ENST00000485037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.255e-6■■■■□ 19.5
EWSR1-219ENST00000485037 KCNA4P22459 653 aa16.38■□□□□ 0.21
EWSR1-219ENST00000485037 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
EWSR1-219ENST00000485037 SLC4A2P04920 1241 aa16.05■□□□□ 0.16
EWSR1-219ENST00000485037 CAPN15O75808 1086 aa16.03■□□□□ 0.16
EWSR1-219ENST00000485037 SPINK5Q9NQ38 1064 aaPredicted RBP16.02■□□□□ 0.16
EWSR1-219ENST00000485037 DSG3P32926 999 aa15.96■□□□□ 0.15
EWSR1-219ENST00000485037 APLP2Q06481 763 aa15.9■□□□□ 0.14
EWSR1-219ENST00000485037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
EWSR1-219ENST00000485037 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
EWSR1-219ENST00000485037 ZNF219Q9P2Y4 722 aaPredicted RBP15.76■□□□□ 0.11
EWSR1-219ENST00000485037 TRHP20396 242 aaPredicted RBP15.74■□□□□ 0.11
EWSR1-219ENST00000485037 SAMD1Q6SPF0 538 aaPredicted RBP15.74■□□□□ 0.11
EWSR1-219ENST00000485037 ABCB7O75027 752 aa15.6■□□□□ 0.09
EWSR1-219ENST00000485037 MYCNP04198 464 aaPredicted RBP15.56■□□□□ 0.08
EWSR1-219ENST00000485037 NISCHQ9Y2I1 1504 aa15.53■□□□□ 0.08
EWSR1-219ENST00000485037 SLC4A1APQ9BWU0 796 aaKnown RBP15.48■□□□□ 0.07
EWSR1-219ENST00000485037 POTEHQ6S545 545 aa15.39■□□□□ 0.05
EWSR1-219ENST00000485037 FOXD4L1Q9NU39 408 aa15.36■□□□□ 0.05
EWSR1-219ENST00000485037 POLA2Q14181 598 aa15.32■□□□□ 0.04
EWSR1-219ENST00000485037 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
EWSR1-219ENST00000485037 ATF5Q9Y2D1 282 aaPredicted RBP15.14■□□□□ 0.01
EWSR1-219ENST00000485037 ZBTB12Q9Y330 459 aaPredicted RBP15.06■□□□□ 0
EWSR1-219ENST00000485037 ZBTB22O15209 634 aa15.02■□□□□ -0
EWSR1-219ENST00000485037 ATXN8OSP0DMR3 200 aa14.95□□□□□ -0.02
EWSR1-219ENST00000485037 CHRDL2Q6WN34 429 aa14.93□□□□□ -0.02
EWSR1-219ENST00000485037 AKT1S1Q96B36 256 aa14.91□□□□□ -0.02
EWSR1-219ENST00000485037 OSCARQ8IYS5 282 aa14.79□□□□□ -0.04
EWSR1-219ENST00000485037 REM2Q8IYK8 340 aaPredicted RBP14.73□□□□□ -0.05
EWSR1-219ENST00000485037 FBLN2P98095 1184 aa14.64□□□□□ -0.07
EWSR1-219ENST00000485037 SPDYE2BA6NHP3 402 aa14.57□□□□□ -0.08
EWSR1-219ENST00000485037 SPDYE6P0CI01 402 aa14.57□□□□□ -0.08
EWSR1-219ENST00000485037 SPDYE2Q495Y8 402 aa14.57□□□□□ -0.08
EWSR1-219ENST00000485037 PITPNM1O00562 1244 aa14.55□□□□□ -0.08
EWSR1-219ENST00000485037 PIP4P2Q8N4L2 257 aa14.54□□□□□ -0.08
EWSR1-219ENST00000485037 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.09
EWSR1-219ENST00000485037 MKRN4PQ13434 485 aaPredicted RBP14.46□□□□□ -0.09
EWSR1-219ENST00000485037 SP7Q8TDD2 431 aaPredicted RBP14.4□□□□□ -0.1
EWSR1-219ENST00000485037 ABCC9O60706 1549 aa14.37□□□□□ -0.11
EWSR1-219ENST00000485037 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
EWSR1-219ENST00000485037 SPDYE1Q8NFV5 336 aaPredicted RBP14.34□□□□□ -0.11
EWSR1-219ENST00000485037 SSUH2Q9Y2M2 353 aa14.34□□□□□ -0.11
EWSR1-219ENST00000485037 HAX1O00165 279 aa14.32□□□□□ -0.12
EWSR1-219ENST00000485037 CSRNP3Q8WYN3 585 aa14.31□□□□□ -0.12
EWSR1-219ENST00000485037 CLEC11AQ9Y240 323 aa14.27□□□□□ -0.13
EWSR1-219ENST00000485037 CCDC180Q9P1Z9 1646 aa14.21□□□□□ -0.13
EWSR1-219ENST00000485037 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
EWSR1-219ENST00000485037 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
EWSR1-219ENST00000485037 EVX2Q03828 476 aa14.09□□□□□ -0.15
EWSR1-219ENST00000485037 PRR29P0C7W0 189 aa14.06□□□□□ -0.16
EWSR1-219ENST00000485037 EHMT2Q96KQ7 1210 aa14.04□□□□□ -0.16
EWSR1-219ENST00000485037 C19orf67A6NJJ6 358 aa14.01□□□□□ -0.17
EWSR1-219ENST00000485037 CHADLQ6NUI6 762 aa13.98□□□□□ -0.17
EWSR1-219ENST00000485037 FARP1Q9Y4F1 1045 aaPredicted RBP13.82□□□□□ -0.2
EWSR1-219ENST00000485037 GABBR2O75899 941 aa13.81□□□□□ -0.2
EWSR1-219ENST00000485037 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
EWSR1-219ENST00000485037 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
EWSR1-219ENST00000485037 CD44P16070 742 aaKnown RBP13.74□□□□□ -0.21
EWSR1-219ENST00000485037 CLCN6P51797 869 aa13.69□□□□□ -0.22
EWSR1-219ENST00000485037 CREBZFQ9NS37 354 aa13.66□□□□□ -0.22
EWSR1-219ENST00000485037 RB1CC1Q8TDY2 1594 aa13.65□□□□□ -0.22
EWSR1-219ENST00000485037 ZNF579Q8NAF0 562 aaKnown RBP13.54□□□□□ -0.24
EWSR1-219ENST00000485037 ZRANB1Q9UGI0 708 aa13.53□□□□□ -0.24
EWSR1-219ENST00000485037 LHX8Q68G74 356 aa13.51□□□□□ -0.25
EWSR1-219ENST00000485037 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
EWSR1-219ENST00000485037 NACADO15069 1562 aa13.49□□□□□ -0.25
EWSR1-219ENST00000485037 NPM1P06748 294 aaKnown RBP eCLIP13.47□□□□□ -0.25
EWSR1-219ENST00000485037 PAK3O75914 559 aaPredicted RBP13.45□□□□□ -0.26
EWSR1-219ENST00000485037 PROM2Q8N271 834 aa13.44□□□□□ -0.26
EWSR1-219ENST00000485037 DCBLD2Q96PD2 775 aa13.44□□□□□ -0.26
EWSR1-219ENST00000485037 MNX1P50219 401 aaPredicted RBP13.41□□□□□ -0.26
EWSR1-219ENST00000485037 GALR2O43603 387 aaPredicted RBP13.33□□□□□ -0.28
EWSR1-219ENST00000485037 PHF12Q96QT6 1004 aa13.3□□□□□ -0.28
EWSR1-219ENST00000485037 UNC13AQ9UPW8 1703 aa13.28□□□□□ -0.28
EWSR1-219ENST00000485037 MYO15BQ96JP2 1530 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms